RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 CAB39LQ9H9S4 337 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 DCDC2Q9UHG0 476 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 ANKRD6Q9Y2G4 727 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 FNDC3AQ9Y2H6 1198 aaKnown RBP12.63□□□□□ -0.39
DDX39A-202ENST00000324340 CRYL1Q9Y2S2 319 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 VWA7Q9Y334 891 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 COMMD10Q9Y6G5 202 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 LRRK1Q38SD2 2015 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 IGLV3-16A0A075B6K0 115 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 A0A096LPK6 155 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 CHURC1-FNTBB4DL54 471 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 COPEO14579 308 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 WNT9AO14904 365 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 GPR39O43194 453 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 EDF1O60869 148 aaKnown RBP12.62□□□□□ -0.39
DDX39A-202ENST00000324340 DNAJC6O75061 913 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 GLRA3O75311 464 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 ESR1P03372 595 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 SLC35E2BP0CK96 405 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 T-ENOLP0DO92 83 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 COL6A2P12110 1019 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 IDO1P14902 403 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 STMN1P16949 149 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 CD72P21854 359 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 CRABP2P29373 138 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 ETV3P41162 512 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 ETV4P43268 484 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 TAS2R39P59534 338 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 TIAL1Q01085 375 aaKnown RBP eCLIP12.62□□□□□ -0.39
DDX39A-202ENST00000324340 AGERQ15109 404 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 PDK4Q16654 411 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 CNPY1Q3B7I2 92 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 ATP13A5Q4VNC0 1218 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 PPM1JQ5JR12 505 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 FOXB2Q5VYV0 432 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 TMEM92Q6UXU6 159 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 CDHR3Q6ZTQ4 885 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 TAS2R42Q7RTR8 314 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 SERPINA9Q86WD7 417 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 SLC41A1Q8IVJ1 513 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 CEP97Q8IW35 865 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 HDDC3Q8N4P3 179 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 TCP10LQ8TDR4 215 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 TSPAN17Q96FV3 270 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 SHDQ96IW2 340 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 OLFM1Q99784 485 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 ZSCAN5AQ9BUG6 496 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 WRAP53Q9BUR4 548 aaKnown RBP12.62□□□□□ -0.39
DDX39A-202ENST00000324340 ABCG8Q9H221 673 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 POPDC3Q9HBV1 291 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 SERGEFQ9UGK8 458 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 CRLS1Q9UJA2 301 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 NDRG2Q9UN36 371 aaKnown RBP12.62□□□□□ -0.39
DDX39A-202ENST00000324340 TRIM33Q9UPN9 1127 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 MRPS17Q9Y2R5 130 aaKnown RBP12.62□□□□□ -0.39
DDX39A-202ENST00000324340 PLLPQ9Y342 182 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 PCDHB1Q9Y5F3 818 aa12.62□□□□□ -0.39
DDX39A-202ENST00000324340 A0A087X1B8 175 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 A0A1W2PP55 124 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 KRBA1A5PL33 1030 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 PLRG1O43660 514 aaKnown RBP12.61□□□□□ -0.39
DDX39A-202ENST00000324340 PSMG1O95456 288 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 ASMTLO95671 621 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 DNTTP04053 509 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 LYNP07948 512 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 DHRS4L1P0CG22 281 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 C6P13671 934 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 ZNF7P17097 686 aaPredicted RBP12.61□□□□□ -0.39
DDX39A-202ENST00000324340 UGT1A6P19224 532 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 UGT1A1P22309 533 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 UGT1A4P22310 534 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 TPP2P29144 1249 aaPredicted RBP12.61□□□□□ -0.39
DDX39A-202ENST00000324340 UGT1A3P35503 534 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 UGT1A5P35504 534 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 SLC26A3P40879 764 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 SERPINB4P48594 390 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 CDKN2DP55273 166 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 WDR4P57081 412 aaKnown RBP12.61□□□□□ -0.39
DDX39A-202ENST00000324340 RAB15P59190 212 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 DPTQ07507 201 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 FZD5Q13467 585 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 LRRC32Q14392 662 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 ACOX1Q15067 660 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 CRY1Q16526 586 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 CTSL3PQ5NE16 218 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 KLC3Q6P597 504 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.61□□□□□ -0.39
DDX39A-202ENST00000324340 USP30Q70CQ3 517 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 UBALD2Q8IYN6 164 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 RBFAQ8N0V3 343 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 SCAMP4Q969E2 229 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 ERLEC1Q96DZ1 483 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 MRGPRX1Q96LB2 322 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 VPS35Q96QK1 796 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 NELL2Q99435 816 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 BTBD10Q9BSF8 475 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 C1QTNF1Q9BXJ1 281 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 SLC13A1Q9BZW2 595 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 KCTD5Q9NXV2 234 aa12.61□□□□□ -0.39
DDX39A-202ENST00000324340 ZDHHC3Q9NYG2 299 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms