RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 RWDD2BP57060 319 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 TFF3Q07654 80 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 KLF1Q13351 362 aaPredicted RBP6.56□□□□□ -1.36
CSTF3-201ENST00000323959 WDR72Q3MJ13 1102 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 BEND6Q5SZJ8 279 aaPredicted RBP6.56□□□□□ -1.36
CSTF3-201ENST00000323959 C12orf54Q6X4T0 127 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 SCD5Q86SK9 330 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 PAQR7Q86WK9 346 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 RASGRP3Q8IV61 690 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 TNIP3Q96KP6 325 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 WDR92Q96MX6 357 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 TMEM9Q9P0T7 183 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 NBEAL2Q6ZNJ1 2754 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 TRPM6Q9BX84 2022 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 TOX3O15405 576 aaPredicted RBP6.56□□□□□ -1.36
CSTF3-201ENST00000323959 UNC5CO95185 931 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 PGRP06401 933 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 COMTP21964 271 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 UGT1A4P22310 534 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 RRM1P23921 792 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 PTPN9P43378 593 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 ZNF135P52742 658 aaPredicted RBP6.56□□□□□ -1.36
CSTF3-201ENST00000323959 BIRC2Q13490 618 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 KYNUQ16719 465 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 RAB41Q5JT25 222 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 PRR31Q5SQ13 230 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 NAA35Q5VZE5 725 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 FBXO38Q6PIJ6 1188 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 RCOR2Q8IZ40 523 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 GALNT16Q8N428 558 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 LRRC17Q8N6Y2 441 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 ANKRD52Q8NB46 1076 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 ZMIZ2Q8NF64 920 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 RBM41Q96IZ5 413 aaKnown RBP6.56□□□□□ -1.36
CSTF3-201ENST00000323959 TBCBQ99426 244 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 SMOQ99835 787 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 SMYD3Q9H7B4 428 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 KRT82Q9NSB4 513 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 LRFN1Q9P244 771 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 STIM2Q9P246 746 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 SLC25A13Q9UJS0 675 aa6.56□□□□□ -1.36
CSTF3-201ENST00000323959 MYO1FO00160 1098 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 SOCS6O14544 535 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 TNFRSF10CO14798 259 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 XPO1O14980 1071 aaKnown RBP6.55□□□□□ -1.36
CSTF3-201ENST00000323959 SLC19A2O60779 497 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 PHF2O75151 1096 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 PYGMP11217 842 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 ARSEP51690 589 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 CLCN6P51797 869 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 NDST1P52848 882 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 MAZP56270 477 aaKnown RBP6.55□□□□□ -1.36
CSTF3-201ENST00000323959 PDCLQ13371 301 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 CCDC181Q5TID7 509 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 MAATS1Q7Z4T9 603 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 P3H2Q8IVL5 708 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 NOA1Q8NC60 698 aaKnown RBP6.55□□□□□ -1.36
CSTF3-201ENST00000323959 IRGQQ8WZA9 623 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 NT5C3BQ969T7 300 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 PGAP3Q96FM1 320 aaPredicted RBP6.55□□□□□ -1.36
CSTF3-201ENST00000323959 MAGED4Q96JG8 741 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 Q96MF0 132 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 LNPEPQ9UIQ6 1025 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 DRG1Q9Y295 367 aaKnown RBP6.55□□□□□ -1.36
CSTF3-201ENST00000323959 GOLGA6L10A0A0M3HER8 536 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 KPNA3O00505 521 aaPredicted RBP6.55□□□□□ -1.36
CSTF3-201ENST00000323959 KLK8O60259 260 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 FTCDO95954 541 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 ZNF143P52747 638 aaPredicted RBP6.55□□□□□ -1.36
CSTF3-201ENST00000323959 KRTAP1-1Q07627 177 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 BST2Q10589 180 aaKnown RBP6.55□□□□□ -1.36
CSTF3-201ENST00000323959 CDH18Q13634 790 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 PTPN20Q4JDL3 420 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 PRAMEF17Q5VTA0 474 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 PAQR9Q6ZVX9 377 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 SLC26A9Q7LBE3 791 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 CXorf67Q86X51 503 aaPredicted RBP6.55□□□□□ -1.36
CSTF3-201ENST00000323959 SLC13A5Q86YT5 568 aaPredicted RBP6.55□□□□□ -1.36
CSTF3-201ENST00000323959 RELL1Q8IUW5 271 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 IFT20Q8IY31 132 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 KRT222Q8N1A0 295 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 ZBTB2Q8N680 514 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 CLEC1AQ8NC01 280 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 DNAJB14Q8TBM8 379 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 ZDHHC1Q8WTX9 485 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 TSACCQ96A04 125 aaPredicted RBP6.55□□□□□ -1.36
CSTF3-201ENST00000323959 FAF2Q96CS3 445 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 C18orf8Q96DM3 657 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 AHCYL2Q96HN2 611 aaKnown RBP6.55□□□□□ -1.36
CSTF3-201ENST00000323959 TWNKQ96RR1 684 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 FEZ2Q9UHY8 353 aaPredicted RBP6.55□□□□□ -1.36
CSTF3-201ENST00000323959 TINAGQ9UJW2 476 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 NME7Q9Y5B8 376 aa6.55□□□□□ -1.36
CSTF3-201ENST00000323959 E9PLN8 166 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 CLDN4O14493 209 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 CLGNO14967 610 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 FBXO21O94952 628 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 USP8P40818 1118 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 EPHA4P54764 986 aa6.54□□□□□ -1.36
CSTF3-201ENST00000323959 KIAA1024LP59773 190 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms