RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 ZNF140P52738 457 aaPredicted RBP28.71■■■□□ 2.19
SYNGR1-202ENST00000318801 POU6F1Q14863 301 aa28.71■■■□□ 2.19
SYNGR1-202ENST00000318801 SKIDA1Q1XH10 827 aa28.71■■■□□ 2.19
SYNGR1-202ENST00000318801 CHCHD2P9Q5T1J5 151 aaPredicted RBP28.71■■■□□ 2.19
SYNGR1-202ENST00000318801 SNX20Q7Z614 316 aa28.71■■■□□ 2.19
SYNGR1-202ENST00000318801 RASGEF1AQ8N9B8 481 aa28.71■■■□□ 2.19
SYNGR1-202ENST00000318801 OR13C4Q8NGS5 318 aa28.71■■■□□ 2.19
SYNGR1-202ENST00000318801 CCDC97Q96F63 343 aaPredicted RBP28.71■■■□□ 2.19
SYNGR1-202ENST00000318801 EPB41L1Q9H4G0 881 aa28.71■■■□□ 2.19
SYNGR1-202ENST00000318801 A6NCN8 305 aa28.7■■■□□ 2.18
SYNGR1-202ENST00000318801 GAPDHSO14556 408 aaPredicted RBP28.7■■■□□ 2.18
SYNGR1-202ENST00000318801 POP7O75817 140 aaKnown RBP28.7■■■□□ 2.18
SYNGR1-202ENST00000318801 VIPP01282 170 aa28.7■■■□□ 2.18
SYNGR1-202ENST00000318801 ITGA2BP08514 1039 aa28.7■■■□□ 2.18
SYNGR1-202ENST00000318801 XRCC1P18887 633 aaPredicted RBP28.7■■■□□ 2.18
SYNGR1-202ENST00000318801 CXCR5P32302 372 aa28.7■■■□□ 2.18
SYNGR1-202ENST00000318801 WASH2PQ6VEQ5 465 aa28.7■■■□□ 2.18
SYNGR1-202ENST00000318801 OR4D9Q8NGE8 314 aa28.7■■■□□ 2.18
SYNGR1-202ENST00000318801 STYXQ8WUJ0 223 aa28.7■■■□□ 2.18
SYNGR1-202ENST00000318801 WASH6PQ9NQA3 447 aa28.7■■■□□ 2.18
SYNGR1-202ENST00000318801 COL27A1Q8IZC6 1860 aaPredicted RBP28.7■■■□□ 2.18
SYNGR1-202ENST00000318801 EPHA4P54764 986 aa28.69■■■□□ 2.18
SYNGR1-202ENST00000318801 TRA2AQ13595 282 aaKnown RBP eCLIP28.69■■■□□ 2.18
SYNGR1-202ENST00000318801 FNBP1LQ5T0N5 605 aa28.69■■■□□ 2.18
SYNGR1-202ENST00000318801 AGAP9Q5VTM2 703 aa28.69■■■□□ 2.18
SYNGR1-202ENST00000318801 ABRAXAS1Q6UWZ7 409 aa28.69■■■□□ 2.18
SYNGR1-202ENST00000318801 BEND7Q8N7W2 519 aaPredicted RBP28.69■■■□□ 2.18
SYNGR1-202ENST00000318801 HNRNPLLQ8WVV9 542 aaKnown RBP28.69■■■□□ 2.18
SYNGR1-202ENST00000318801 PBKQ96KB5 322 aa28.69■■■□□ 2.18
SYNGR1-202ENST00000318801 NAP1L3Q99457 506 aaPredicted RBP28.69■■■□□ 2.18
SYNGR1-202ENST00000318801 NLE1Q9NVX2 485 aaPredicted RBP28.69■■■□□ 2.18
SYNGR1-202ENST00000318801 BPTFQ12830 3046 aa28.68■■■□□ 2.18
SYNGR1-202ENST00000318801 OR2AG2A6NM03 316 aa28.68■■■□□ 2.18
SYNGR1-202ENST00000318801 GPR39O43194 453 aa28.68■■■□□ 2.18
SYNGR1-202ENST00000318801 TLX3O43711 291 aaPredicted RBP28.68■■■□□ 2.18
SYNGR1-202ENST00000318801 APRTP07741 180 aa28.68■■■□□ 2.18
SYNGR1-202ENST00000318801 RPL10P27635 214 aaKnown RBP28.68■■■□□ 2.18
SYNGR1-202ENST00000318801 XIAPP98170 497 aa28.68■■■□□ 2.18
SYNGR1-202ENST00000318801 SEPT7Q16181 437 aaKnown RBP28.68■■■□□ 2.18
SYNGR1-202ENST00000318801 NKAIN2Q5VXU1 208 aa28.68■■■□□ 2.18
SYNGR1-202ENST00000318801 SLITRK4Q8IW52 837 aa28.68■■■□□ 2.18
SYNGR1-202ENST00000318801 CXorf40BQ96DE9 158 aa28.68■■■□□ 2.18
SYNGR1-202ENST00000318801 COPS8Q99627 209 aa28.68■■■□□ 2.18
SYNGR1-202ENST00000318801 SEMA6CQ9H3T2 930 aa28.68■■■□□ 2.18
SYNGR1-202ENST00000318801 ASCL3Q9NQ33 180 aa28.68■■■□□ 2.18
SYNGR1-202ENST00000318801 HGSO14964 777 aaPredicted RBP28.67■■■□□ 2.18
SYNGR1-202ENST00000318801 SUN1O94901 812 aa28.67■■■□□ 2.18
SYNGR1-202ENST00000318801 MC4RP32245 332 aa28.67■■■□□ 2.18
SYNGR1-202ENST00000318801 ABCG1P45844 678 aa28.67■■■□□ 2.18
SYNGR1-202ENST00000318801 SEMA5AQ13591 1074 aa28.67■■■□□ 2.18
SYNGR1-202ENST00000318801 ZRANB3Q5FWF4 1079 aa28.67■■■□□ 2.18
SYNGR1-202ENST00000318801 TMEM71Q6P5X7 295 aa28.67■■■□□ 2.18
SYNGR1-202ENST00000318801 RBM12BQ8IXT5 1001 aaKnown RBP28.67■■■□□ 2.18
SYNGR1-202ENST00000318801 NXPE1Q8N323 547 aa28.67■■■□□ 2.18
SYNGR1-202ENST00000318801 OR52K1Q8NGK4 314 aa28.67■■■□□ 2.18
SYNGR1-202ENST00000318801 SGF29Q96ES7 293 aa28.67■■■□□ 2.18
SYNGR1-202ENST00000318801 DNAJC1Q96KC8 554 aaKnown RBP28.67■■■□□ 2.18
SYNGR1-202ENST00000318801 NUDT22Q9BRQ3 303 aa28.67■■■□□ 2.18
SYNGR1-202ENST00000318801 UCK1Q9HA47 277 aa28.67■■■□□ 2.18
SYNGR1-202ENST00000318801 LOXL2Q9Y4K0 774 aa28.67■■■□□ 2.18
SYNGR1-202ENST00000318801 ZNF106Q9H2Y7 1883 aaKnown RBP28.67■■■□□ 2.18
SYNGR1-202ENST00000318801 HEATR9A2RTY3 570 aa28.66■■■□□ 2.18
SYNGR1-202ENST00000318801 AGAP14A8MT82 685 aa28.66■■■□□ 2.18
SYNGR1-202ENST00000318801 H7C0S8 307 aa28.66■■■□□ 2.18
SYNGR1-202ENST00000318801 AP3B1O00203 1094 aa28.66■■■□□ 2.18
SYNGR1-202ENST00000318801 KIF5CO60282 957 aa28.66■■■□□ 2.18
SYNGR1-202ENST00000318801 LIMK2P53671 638 aa28.66■■■□□ 2.18
SYNGR1-202ENST00000318801 DMPKQ09013 629 aa28.66■■■□□ 2.18
SYNGR1-202ENST00000318801 SIX1Q15475 284 aaPredicted RBP28.66■■■□□ 2.18
SYNGR1-202ENST00000318801 TMEM164Q5U3C3 297 aa28.66■■■□□ 2.18
SYNGR1-202ENST00000318801 WDR74Q6RFH5 385 aaPredicted RBP28.66■■■□□ 2.18
SYNGR1-202ENST00000318801 DET1Q7L5Y6 550 aa28.66■■■□□ 2.18
SYNGR1-202ENST00000318801 TAS2R42Q7RTR8 314 aa28.66■■■□□ 2.18
SYNGR1-202ENST00000318801 C11orf96Q7Z7L8 435 aa28.66■■■□□ 2.18
SYNGR1-202ENST00000318801 ZNF761Q86XN6 746 aaPredicted RBP28.66■■■□□ 2.18
SYNGR1-202ENST00000318801 PIH1D1Q9NWS0 290 aaKnown RBP28.66■■■□□ 2.18
SYNGR1-202ENST00000318801 CHD6Q8TD26 2715 aa28.66■■■□□ 2.18
SYNGR1-202ENST00000318801 CTSCP53634 463 aa28.65■■■□□ 2.18
SYNGR1-202ENST00000318801 CCDC173Q0VFZ6 552 aa28.65■■■□□ 2.18
SYNGR1-202ENST00000318801 C19orf48Q6RUI8 117 aa28.65■■■□□ 2.18
SYNGR1-202ENST00000318801 NLRP9Q7RTR0 991 aa28.65■■■□□ 2.18
SYNGR1-202ENST00000318801 JAMLQ86YT9 394 aa28.65■■■□□ 2.18
SYNGR1-202ENST00000318801 NCSTNQ92542 709 aa28.65■■■□□ 2.18
SYNGR1-202ENST00000318801 PRR11Q96HE9 360 aaPredicted RBP28.65■■■□□ 2.18
SYNGR1-202ENST00000318801 CDKN2AIPNLQ96HQ2 116 aa28.65■■■□□ 2.18
SYNGR1-202ENST00000318801 TTC1Q99614 292 aa28.65■■■□□ 2.18
SYNGR1-202ENST00000318801 VPS37BQ9H9H4 285 aa28.65■■■□□ 2.18
SYNGR1-202ENST00000318801 POT1Q9NUX5 634 aa28.65■■■□□ 2.18
SYNGR1-202ENST00000318801 PISDQ9UG56 409 aa28.65■■■□□ 2.18
SYNGR1-202ENST00000318801 ACSL5Q9ULC5 683 aa28.65■■■□□ 2.18
SYNGR1-202ENST00000318801 IGHV5-10-1A0A0J9YXX1 117 aa28.64■■■□□ 2.18
SYNGR1-202ENST00000318801 A0A1W2PNU3 283 aaPredicted RBP28.64■■■□□ 2.18
SYNGR1-202ENST00000318801 MGAT4DA6NG13 374 aa28.64■■■□□ 2.18
SYNGR1-202ENST00000318801 ETS1P14921 441 aa28.64■■■□□ 2.18
SYNGR1-202ENST00000318801 CSTF2P33240 577 aaKnown RBP eCLIP28.64■■■□□ 2.18
SYNGR1-202ENST00000318801 RPL22P35268 128 aaKnown RBP28.64■■■□□ 2.18
SYNGR1-202ENST00000318801 MAPK9P45984 424 aa28.64■■■□□ 2.18
SYNGR1-202ENST00000318801 DRG2P55039 364 aaKnown RBP28.64■■■□□ 2.18
SYNGR1-202ENST00000318801 UBE2IP63279 158 aaKnown RBP28.64■■■□□ 2.18
SYNGR1-202ENST00000318801 CACNG1Q06432 222 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms