RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 COPAP53621 1224 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 CDKN2DP55273 166 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 PRAMEP78395 509 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 STX3Q13277 289 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 SPCS2Q15005 226 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 PAOXQ6QHF9 649 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 FRA10AC1Q70Z53 315 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 GRASPQ7Z6J2 395 aaPredicted RBP12.94□□□□□ -0.34
CPNE1-201ENST00000317677 CHERPQ8IWX8 916 aaKnown RBP12.94□□□□□ -0.34
CPNE1-201ENST00000317677 TTC30BQ8N4P2 665 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 OR6K2Q8NGY2 324 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 CALML6Q8TD86 181 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 TMIGD2Q96BF3 282 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 NXNL1Q96CM4 212 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 MOCOSQ96EN8 888 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 CDKN2AIPNLQ96HQ2 116 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 SH3GL1Q99961 368 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 NMRAL1Q9HBL8 299 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 EPS15L1Q9UBC2 864 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 KLHL3Q9UH77 587 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 ERGIC3Q9Y282 383 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 ANKRD6Q9Y2G4 727 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 RWDD3Q9Y3V2 267 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 ARIH1Q9Y4X5 557 aaPredicted RBP12.94□□□□□ -0.34
CPNE1-201ENST00000317677 C2orf16Q68DN1 1984 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 PRRC2BQ5JSZ5 2229 aaKnown RBP12.93□□□□□ -0.34
CPNE1-201ENST00000317677 ANKRD66B4E2M5 251 aa12.93□□□□□ -0.34
CPNE1-201ENST00000317677 STMN1P16949 149 aa12.93□□□□□ -0.34
CPNE1-201ENST00000317677 CEBPBP17676 345 aa12.93□□□□□ -0.34
CPNE1-201ENST00000317677 PSMC3P17980 439 aa12.93□□□□□ -0.34
CPNE1-201ENST00000317677 STK19P49842 368 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-201ENST00000317677 CLCN5P51795 746 aa12.93□□□□□ -0.34
CPNE1-201ENST00000317677 SLC12A1Q13621 1099 aa12.93□□□□□ -0.34
CPNE1-201ENST00000317677 ZNF77Q15935 545 aa12.93□□□□□ -0.34
CPNE1-201ENST00000317677 RGS21Q2M5E4 152 aa12.93□□□□□ -0.34
CPNE1-201ENST00000317677 TMEM207Q6UWW9 146 aa12.93□□□□□ -0.34
CPNE1-201ENST00000317677 SLC7A5P1Q8MH63 180 aa12.93□□□□□ -0.34
CPNE1-201ENST00000317677 OR4K2Q8NGD2 314 aa12.93□□□□□ -0.34
CPNE1-201ENST00000317677 GPR150Q8NGU9 434 aa12.93□□□□□ -0.34
CPNE1-201ENST00000317677 ISOC1Q96CN7 298 aa12.93□□□□□ -0.34
CPNE1-201ENST00000317677 EID2BQ96D98 161 aa12.93□□□□□ -0.34
CPNE1-201ENST00000317677 NDEL1Q9GZM8 345 aa12.93□□□□□ -0.34
CPNE1-201ENST00000317677 LINC00597Q9H2U6 94 aa12.93□□□□□ -0.34
CPNE1-201ENST00000317677 ACSS2Q9NR19 701 aa12.93□□□□□ -0.34
CPNE1-201ENST00000317677 IGSF5Q9NSI5 407 aa12.93□□□□□ -0.34
CPNE1-201ENST00000317677 MARCOQ9UEW3 520 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-201ENST00000317677 BCAP29Q9UHQ4 241 aa12.93□□□□□ -0.34
CPNE1-201ENST00000317677 EVLQ9UI08 416 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-201ENST00000317677 RIMS3Q9UJD0 308 aa12.93□□□□□ -0.34
CPNE1-201ENST00000317677 ERVK-11Q9UQG0 969 aa12.93□□□□□ -0.34
CPNE1-201ENST00000317677 RUVBL2Q9Y230 463 aaKnown RBP12.93□□□□□ -0.34
CPNE1-201ENST00000317677 NUP210Q8TEM1 1887 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-201ENST00000317677 TRANK1O15050 2925 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 TNFRSF10AO00220 468 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 CD3EAPO15446 510 aaKnown RBP12.92□□□□□ -0.34
CPNE1-201ENST00000317677 SERPINE1P05121 402 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 RB1P06400 928 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 POU3F3P20264 500 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-201ENST00000317677 TTKP33981 857 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 HNRNPFP52597 415 aaKnown RBP12.92□□□□□ -0.34
CPNE1-201ENST00000317677 PLK1P53350 603 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 ESRRGP62508 458 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 POU4F1Q01851 419 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 GK3PQ14409 553 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 TAF1AQ15573 450 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-201ENST00000317677 KCNJ8Q15842 424 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 FUT11Q495W5 492 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 PITRM1Q5JRX3 1037 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 RALGPS1Q5JS13 557 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 DGKKQ5KSL6 1271 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 HECTD2Q5U5R9 776 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 LRRC8EQ6NSJ5 796 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 RTL10Q7L3V2 364 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 GLT6D1Q7Z4J2 308 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 CAMK1DQ8IU85 385 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 ARID3BQ8IVW6 561 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-201ENST00000317677 FSTL5Q8N475 847 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-201ENST00000317677 PDCD6IPQ8WUM4 868 aaKnown RBP12.92□□□□□ -0.34
CPNE1-201ENST00000317677 ING5Q8WYH8 240 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 THAP11Q96EK4 314 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 ZNF641Q96N77 438 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-201ENST00000317677 SAMD11Q96NU1 681 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 LRRC3BQ96PB8 259 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 C2orf49Q9BVC5 232 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-201ENST00000317677 ARMC7Q9H6L4 198 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 ABCB8Q9NUT2 735 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 TDP1Q9NUW8 608 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 THAP1Q9NVV9 213 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 POLR3BQ9NW08 1133 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-201ENST00000317677 PTBP2Q9UKA9 531 aaKnown RBP12.92□□□□□ -0.34
CPNE1-201ENST00000317677 TLK1Q9UKI8 766 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 ACOT9Q9Y305 439 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 IFT52Q9Y366 437 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 ZNF106Q9H2Y7 1883 aaKnown RBP12.92□□□□□ -0.34
CPNE1-201ENST00000317677 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-201ENST00000317677 PIGNO95427 931 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 SLC4A1P02730 911 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 HNRNPA1P09651 372 aaKnown RBP eCLIP12.92□□□□□ -0.34
CPNE1-201ENST00000317677 KITP10721 976 aa12.92□□□□□ -0.34
CPNE1-201ENST00000317677 RALBP11234 206 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms