RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 ZNF296Q8WUU4 475 aaPredicted RBP11.41□□□□□ -0.58
PTPN2-201ENST00000309660 PPM1MQ96MI6 270 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 SPATA16Q9BXB7 569 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 HACD3Q9P035 362 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 IL17CQ9P0M4 197 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 CD300AQ9UGN4 299 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 DHRS12A0PJE2 317 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 PITPNM1O00562 1244 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 UROSP10746 265 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 SLC6A2P23975 617 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 SLC7A1P30825 629 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 PTGER3P43115 390 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 IKBKEQ14164 716 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 ARMC3Q5W041 872 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 HJURPQ8NCD3 748 aaPredicted RBP11.41□□□□□ -0.58
PTPN2-201ENST00000309660 ZNF483Q8TF39 744 aaPredicted RBP11.41□□□□□ -0.58
PTPN2-201ENST00000309660 STON2Q8WXE9 905 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 KCNJ9Q92806 393 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 ROPN1LQ96C74 230 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 MTFMTQ96DP5 389 aaKnown RBP11.41□□□□□ -0.58
PTPN2-201ENST00000309660 ASIC4Q96FT7 647 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 FAM192AQ9GZU8 254 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 INTS7Q9NVH2 962 aaKnown RBP11.41□□□□□ -0.58
PTPN2-201ENST00000309660 RAB26Q9ULW5 256 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 ATP11BQ9Y2G3 1177 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 ESR1P03372 595 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 ZNF7P17097 686 aaPredicted RBP11.41□□□□□ -0.58
PTPN2-201ENST00000309660 PSMA4P25789 261 aaKnown RBP11.41□□□□□ -0.58
PTPN2-201ENST00000309660 RPL10P27635 214 aaKnown RBP11.41□□□□□ -0.58
PTPN2-201ENST00000309660 OXTRP30559 389 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 STK19P49842 368 aaPredicted RBP11.41□□□□□ -0.58
PTPN2-201ENST00000309660 DGKQP52824 942 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 MYBPC1Q00872 1141 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 SLC2A7Q6PXP3 512 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 MBOAT1Q6ZNC8 495 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 APLFQ8IW19 511 aaPredicted RBP11.41□□□□□ -0.58
PTPN2-201ENST00000309660 MARVELD2Q8N4S9 558 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 LKAAEAR1Q8TD35 194 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 KCTD14Q9BQ13 255 aaPredicted RBP11.41□□□□□ -0.58
PTPN2-201ENST00000309660 IPPKQ9H8X2 491 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 ZFP14Q9HCL3 533 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 RIC8BQ9NVN3 520 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 CFAP97Q9P2B7 532 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 SH3BP1Q9Y3L3 701 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 FRMPD3Q5JV73 1810 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 SCN5AQ14524 2016 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 BBIP1A8MTZ0 92 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 FXYD1O00168 92 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 E2F3O00716 465 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 C8BP07358 591 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 ZNF26P17031 533 aaPredicted RBP11.4□□□□□ -0.58
PTPN2-201ENST00000309660 CACNG1Q06432 222 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 C6orf136Q5SQH8 315 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 RETSATQ6NUM9 610 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 KLHDC10Q6PID8 442 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 BLOC1S3Q6QNY0 202 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 TSPAN33Q86UF1 283 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 OR4F6Q8NGB9 312 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 ZNF558Q96NG5 402 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 HOPXQ9BPY8 73 aaPredicted RBP11.4□□□□□ -0.58
PTPN2-201ENST00000309660 C2orf49Q9BVC5 232 aaPredicted RBP11.4□□□□□ -0.58
PTPN2-201ENST00000309660 WWOXQ9NZC7 414 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 ZNHIT2Q9UHR6 403 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 RIMKLBQ9ULI2 386 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 POLR3HQ9Y535 204 aaPredicted RBP11.4□□□□□ -0.58
PTPN2-201ENST00000309660 GPR45Q9Y5Y3 372 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 BACE2Q9Y5Z0 518 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 PRSS21Q9Y6M0 314 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 TNFAIP8O95379 198 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 SOD2P04179 222 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 ITGALP20701 1170 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 IL10P22301 178 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 POLR2JP52435 117 aaKnown RBP11.4□□□□□ -0.58
PTPN2-201ENST00000309660 LIPEQ05469 1076 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 ARHGEF7Q14155 803 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 INPP5AQ14642 412 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 HMBOX1Q6NT76 420 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 TXNDC11Q6PKC3 985 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 DET1Q7L5Y6 550 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 BBS7Q8IWZ6 715 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 CBR4Q8N4T8 237 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 ALG2Q9H553 416 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 CWH43Q9H720 699 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 INSL5Q9Y5Q6 135 aa11.4□□□□□ -0.58
PTPN2-201ENST00000309660 FNDC1Q4ZHG4 1894 aaPredicted RBP11.4□□□□□ -0.58
PTPN2-201ENST00000309660 ARPC2O15144 300 aa11.4□□□□□ -0.59
PTPN2-201ENST00000309660 FFAR2O15552 330 aa11.4□□□□□ -0.59
PTPN2-201ENST00000309660 DENRO43583 198 aaKnown RBP11.4□□□□□ -0.59
PTPN2-201ENST00000309660 FESP07332 822 aa11.4□□□□□ -0.59
PTPN2-201ENST00000309660 SLC2A4P14672 509 aa11.4□□□□□ -0.59
PTPN2-201ENST00000309660 HMGCLP35914 325 aa11.4□□□□□ -0.59
PTPN2-201ENST00000309660 GSK3BP49841 420 aa11.4□□□□□ -0.59
PTPN2-201ENST00000309660 ATP4BP51164 291 aa11.4□□□□□ -0.59
PTPN2-201ENST00000309660 TRAP1Q12931 704 aaKnown RBP11.4□□□□□ -0.59
PTPN2-201ENST00000309660 TRIM60Q495X7 471 aa11.4□□□□□ -0.59
PTPN2-201ENST00000309660 RBM44Q6ZP01 1051 aaKnown RBP11.4□□□□□ -0.59
PTPN2-201ENST00000309660 MILR1Q7Z6M3 343 aa11.4□□□□□ -0.59
PTPN2-201ENST00000309660 MYLIPQ8WY64 445 aa11.4□□□□□ -0.59
PTPN2-201ENST00000309660 PFDN4Q9NQP4 134 aa11.4□□□□□ -0.59
PTPN2-201ENST00000309660 LSM7Q9UK45 103 aaKnown RBP11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms