RNA–Protein interactions for RNA: ENST00000307301.11

MRPL39-201, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MRPL39, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-201ENST00000307301 CCDC38Q502W7 563 aa20.47■□□□□ 0.87
MRPL39-201ENST00000307301 FNBP1LQ5T0N5 605 aa20.47■□□□□ 0.87
MRPL39-201ENST00000307301 PHF19Q5T6S3 580 aa20.47■□□□□ 0.87
MRPL39-201ENST00000307301 ZNF574Q6ZN55 896 aaPredicted RBP20.47■□□□□ 0.87
MRPL39-201ENST00000307301 RAB11FIP2Q7L804 512 aa20.47■□□□□ 0.87
MRPL39-201ENST00000307301 GSTA5Q7RTV2 222 aa20.47■□□□□ 0.87
MRPL39-201ENST00000307301 SNX20Q7Z614 316 aa20.47■□□□□ 0.87
MRPL39-201ENST00000307301 SLC35F6Q8N357 371 aa20.47■□□□□ 0.87
MRPL39-201ENST00000307301 PRELID2Q8N945 189 aa20.47■□□□□ 0.87
MRPL39-201ENST00000307301 SNIP1Q8TAD8 396 aaKnown RBP20.47■□□□□ 0.87
MRPL39-201ENST00000307301 STYXQ8WUJ0 223 aa20.47■□□□□ 0.87
MRPL39-201ENST00000307301 FGF11Q92914 225 aa20.47■□□□□ 0.87
MRPL39-201ENST00000307301 ULK4Q96C45 1275 aa20.47■□□□□ 0.87
MRPL39-201ENST00000307301 CCDC97Q96F63 343 aaPredicted RBP20.47■□□□□ 0.87
MRPL39-201ENST00000307301 MS4A14Q96JA4 679 aa20.47■□□□□ 0.87
MRPL39-201ENST00000307301 PDLIM2Q96JY6 352 aa20.47■□□□□ 0.87
MRPL39-201ENST00000307301 CPNE7Q9UBL6 633 aa20.47■□□□□ 0.87
MRPL39-201ENST00000307301 SLC30A1Q9Y6M5 507 aa20.47■□□□□ 0.87
MRPL39-201ENST00000307301 ADAMTS20P59510 1910 aa20.47■□□□□ 0.87
MRPL39-201ENST00000307301 H7C0S8 307 aa20.46■□□□□ 0.87
MRPL39-201ENST00000307301 APRTP07741 180 aa20.46■□□□□ 0.87
MRPL39-201ENST00000307301 BRAFP15056 766 aa20.46■□□□□ 0.87
MRPL39-201ENST00000307301 IDSP22304 550 aa20.46■□□□□ 0.87
MRPL39-201ENST00000307301 RBMS1P29558 406 aaKnown RBP20.46■□□□□ 0.87
MRPL39-201ENST00000307301 PBLDP30039 288 aaPredicted RBP20.46■□□□□ 0.87
MRPL39-201ENST00000307301 EIF2S3P41091 472 aaKnown RBP20.46■□□□□ 0.87
MRPL39-201ENST00000307301 CDKN1CP49918 316 aaPredicted RBP20.46■□□□□ 0.87
MRPL39-201ENST00000307301 UBE2IP63279 158 aaKnown RBP20.46■□□□□ 0.87
MRPL39-201ENST00000307301 GPLD1P80108 840 aa20.46■□□□□ 0.87
MRPL39-201ENST00000307301 CFHR1Q03591 330 aa20.46■□□□□ 0.87
MRPL39-201ENST00000307301 CLPPQ16740 277 aaPredicted RBP20.46■□□□□ 0.87
MRPL39-201ENST00000307301 KCTD19Q17RG1 926 aaPredicted RBP20.46■□□□□ 0.87
MRPL39-201ENST00000307301 IGF2-ASQ6U949 168 aa20.46■□□□□ 0.87
MRPL39-201ENST00000307301 AMZ2Q86W34 360 aa20.46■□□□□ 0.87
MRPL39-201ENST00000307301 NXPE1Q8N323 547 aa20.46■□□□□ 0.87
MRPL39-201ENST00000307301 RASGEF1CQ8N431 466 aa20.46■□□□□ 0.87
MRPL39-201ENST00000307301 BEND7Q8N7W2 519 aaPredicted RBP20.46■□□□□ 0.87
MRPL39-201ENST00000307301 SGF29Q96ES7 293 aa20.46■□□□□ 0.87
MRPL39-201ENST00000307301 PBKQ96KB5 322 aa20.46■□□□□ 0.87
MRPL39-201ENST00000307301 ZNF578Q96N58 590 aaPredicted RBP20.46■□□□□ 0.87
MRPL39-201ENST00000307301 SLC46A1Q96NT5 459 aa20.46■□□□□ 0.87
MRPL39-201ENST00000307301 ZNF624Q9P2J8 865 aaPredicted RBP20.46■□□□□ 0.87
MRPL39-201ENST00000307301 URB1O60287 2271 aaKnown RBP20.46■□□□□ 0.87
MRPL39-201ENST00000307301 PKD1L2Q7Z442 2459 aa20.45■□□□□ 0.86
MRPL39-201ENST00000307301 MROH6A6NGR9 719 aa20.45■□□□□ 0.86
MRPL39-201ENST00000307301 PLD2O14939 933 aa20.45■□□□□ 0.86
MRPL39-201ENST00000307301 TNFSF15O95150 251 aa20.45■□□□□ 0.86
MRPL39-201ENST00000307301 PRSS56P0CW18 603 aa20.45■□□□□ 0.86
MRPL39-201ENST00000307301 HGFP14210 728 aa20.45■□□□□ 0.86
MRPL39-201ENST00000307301 HOXB3P14651 431 aaPredicted RBP20.45■□□□□ 0.86
MRPL39-201ENST00000307301 XRCC1P18887 633 aaPredicted RBP20.45■□□□□ 0.86
MRPL39-201ENST00000307301 SLC19A1P41440 591 aa20.45■□□□□ 0.86
MRPL39-201ENST00000307301 PPM1FP49593 454 aaPredicted RBP20.45■□□□□ 0.86
MRPL39-201ENST00000307301 ERVPABLB-1P60509 514 aa20.45■□□□□ 0.86
MRPL39-201ENST00000307301 DMPKQ09013 629 aa20.45■□□□□ 0.86
MRPL39-201ENST00000307301 EIF3IQ13347 325 aaKnown RBP20.45■□□□□ 0.86
MRPL39-201ENST00000307301 SQSTM1Q13501 440 aa20.45■□□□□ 0.86
MRPL39-201ENST00000307301 ZRANB3Q5FWF4 1079 aa20.45■□□□□ 0.86
MRPL39-201ENST00000307301 AGAP9Q5VTM2 703 aa20.45■□□□□ 0.86
MRPL39-201ENST00000307301 ABRAXAS1Q6UWZ7 409 aa20.45■□□□□ 0.86
MRPL39-201ENST00000307301 FAM83HQ6ZRV2 1179 aaPredicted RBP20.45■□□□□ 0.86
MRPL39-201ENST00000307301 FBXO39Q8N4B4 442 aa20.45■□□□□ 0.86
MRPL39-201ENST00000307301 OR10G6Q8NH81 332 aa20.45■□□□□ 0.86
MRPL39-201ENST00000307301 HNRNPLLQ8WVV9 542 aaKnown RBP20.45■□□□□ 0.86
MRPL39-201ENST00000307301 SH3KBP1Q96B97 665 aa20.45■□□□□ 0.86
MRPL39-201ENST00000307301 AHCYL2Q96HN2 611 aaKnown RBP20.45■□□□□ 0.86
MRPL39-201ENST00000307301 CDKN2AIPNLQ96HQ2 116 aa20.45■□□□□ 0.86
MRPL39-201ENST00000307301 ZNF514Q96K75 400 aaPredicted RBP20.45■□□□□ 0.86
MRPL39-201ENST00000307301 CASS4Q9NQ75 786 aa20.45■□□□□ 0.86
MRPL39-201ENST00000307301 THSD1Q9NS62 852 aa20.45■□□□□ 0.86
MRPL39-201ENST00000307301 HOMER3Q9NSC5 361 aa20.45■□□□□ 0.86
MRPL39-201ENST00000307301 TMEM9Q9P0T7 183 aa20.45■□□□□ 0.86
MRPL39-201ENST00000307301 WDR37Q9Y2I8 494 aa20.45■□□□□ 0.86
MRPL39-201ENST00000307301 LOXL2Q9Y4K0 774 aa20.45■□□□□ 0.86
MRPL39-201ENST00000307301 DNMT3AQ9Y6K1 912 aaPredicted RBP20.45■□□□□ 0.86
MRPL39-201ENST00000307301 DSPP15924 2871 aaKnown RBP20.44■□□□□ 0.86
MRPL39-201ENST00000307301 A0A087WV48 116 aa20.44■□□□□ 0.86
MRPL39-201ENST00000307301 IGHV5-10-1A0A0J9YXX1 117 aa20.44■□□□□ 0.86
MRPL39-201ENST00000307301 SGTAO43765 313 aa20.44■□□□□ 0.86
MRPL39-201ENST00000307301 KCNJ13O60928 360 aa20.44■□□□□ 0.86
MRPL39-201ENST00000307301 GAS8O95995 478 aa20.44■□□□□ 0.86
MRPL39-201ENST00000307301 ARSDP51689 593 aa20.44■□□□□ 0.86
MRPL39-201ENST00000307301 BASP1P80723 227 aaKnown RBP20.44■□□□□ 0.86
MRPL39-201ENST00000307301 NFE2L1Q14494 772 aa20.44■□□□□ 0.86
MRPL39-201ENST00000307301 GPR33Q49SQ1 333 aa20.44■□□□□ 0.86
MRPL39-201ENST00000307301 C19orf48Q6RUI8 117 aa20.44■□□□□ 0.86
MRPL39-201ENST00000307301 C4orf22Q6V702 233 aa20.44■□□□□ 0.86
MRPL39-201ENST00000307301 WASH2PQ6VEQ5 465 aa20.44■□□□□ 0.86
MRPL39-201ENST00000307301 TRIM48Q8IWZ4 208 aa20.44■□□□□ 0.86
MRPL39-201ENST00000307301 AVL9Q8NBF6 648 aa20.44■□□□□ 0.86
MRPL39-201ENST00000307301 RCBTB1Q8NDN9 531 aa20.44■□□□□ 0.86
MRPL39-201ENST00000307301 OR4D9Q8NGE8 314 aa20.44■□□□□ 0.86
MRPL39-201ENST00000307301 DCUN1D1Q96GG9 259 aa20.44■□□□□ 0.86
MRPL39-201ENST00000307301 CCDC74BQ96LY2 380 aa20.44■□□□□ 0.86
MRPL39-201ENST00000307301 COPS8Q99627 209 aa20.44■□□□□ 0.86
MRPL39-201ENST00000307301 TBC1D10AQ9BXI6 508 aa20.44■□□□□ 0.86
MRPL39-201ENST00000307301 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.44■□□□□ 0.86
MRPL39-201ENST00000307301 ZMYND15Q9H091 742 aa20.44■□□□□ 0.86
MRPL39-201ENST00000307301 WASH6PQ9NQA3 447 aa20.44■□□□□ 0.86
MRPL39-201ENST00000307301 TRBV5-4A0A0C4DH59 114 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms