RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 TICAM1Q8IUC6 712 aa21.7■■□□□ 1.06
TPM4-201ENST00000300933 ADCY4Q8NFM4 1077 aa21.7■■□□□ 1.06
TPM4-201ENST00000300933 TSPAN14Q8NG11 270 aa21.7■■□□□ 1.06
TPM4-201ENST00000300933 CD200R1Q8TD46 325 aa21.7■■□□□ 1.06
TPM4-201ENST00000300933 TCEAL4Q96EI5 215 aa21.7■■□□□ 1.06
TPM4-201ENST00000300933 MYO19Q96H55 970 aa21.7■■□□□ 1.06
TPM4-201ENST00000300933 CDK15Q96Q40 435 aa21.7■■□□□ 1.06
TPM4-201ENST00000300933 TFB2MQ9H5Q4 396 aaKnown RBP21.7■■□□□ 1.06
TPM4-201ENST00000300933 GMPR2Q9P2T1 348 aaKnown RBP21.7■■□□□ 1.06
TPM4-201ENST00000300933 RSL24D1Q9UHA3 163 aaKnown RBP21.7■■□□□ 1.06
TPM4-201ENST00000300933 RIMKLBQ9ULI2 386 aa21.7■■□□□ 1.06
TPM4-201ENST00000300933 LCHNA4D1U4 455 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 FBP2O00757 339 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 FZD6O60353 706 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 LILRB3O75022 631 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 RFPL2O75678 378 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 PSMC3P17980 439 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 PPP3CCP48454 512 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 C16orf89Q6UX73 402 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 TSPAN33Q86UF1 283 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 ITIH5Q86UX2 942 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 CAAP1Q9H8G2 361 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 IL1RL2Q9HB29 575 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 SAGE1Q9NXZ1 904 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 VPS26AO75436 327 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 TTPAP49638 278 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 CLCQ05315 142 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 RALGDSQ12967 914 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 PITRM1Q5JRX3 1037 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 CHSY3Q70JA7 882 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 LARP4Q71RC2 724 aaKnown RBP eCLIP21.69■■□□□ 1.06
TPM4-201ENST00000300933 SPRED2Q7Z698 418 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 CLYBLQ8N0X4 340 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 AFAP1L2Q8N4X5 818 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 TWIST2Q8WVJ9 160 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 EME1Q96AY2 570 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 HBEGFQ99075 208 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 ACOX2Q99424 681 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 DERL2Q9GZP9 239 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 CRISPLD2Q9H0B8 497 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 SLC30A1Q9Y6M5 507 aa21.69■■□□□ 1.06
TPM4-201ENST00000300933 HIDE1A8MVS5 230 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 GFRA2O00451 464 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 KERAO60938 352 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 COQ9O75208 318 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 PGLSO95336 258 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 OLFM2O95897 454 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 ARL1P40616 181 aaPredicted RBP21.68■■□□□ 1.06
TPM4-201ENST00000300933 PIGGQ5H8A4 983 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 TMC8Q8IU68 726 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 FIBCD1Q8N539 461 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 DCAF4L2Q8NA75 395 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 CATSPER1Q8NEC5 780 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 C17orf80Q9BSJ5 609 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 C2orf49Q9BVC5 232 aaPredicted RBP21.68■■□□□ 1.06
TPM4-201ENST00000300933 ABCB8Q9NUT2 735 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 LSM7Q9UK45 103 aaKnown RBP21.68■■□□□ 1.06
TPM4-201ENST00000300933 OAS3Q9Y6K5 1087 aaKnown RBP21.68■■□□□ 1.06
TPM4-201ENST00000300933 SZT2Q5T011 3432 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 AZIN1O14977 448 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 RNASEH2AO75792 299 aaKnown RBP21.68■■□□□ 1.06
TPM4-201ENST00000300933 PRAMEF1O95521 474 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 TIMP1P01033 207 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 HNF1BP35680 557 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 ERVFC1P60507 584 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 KIF19Q2TAC6 998 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 LPCAT2Q7L5N7 544 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 RHEBL1Q8TAI7 183 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 LRCH3Q96II8 777 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 PCDHAC1Q9H158 963 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 RETREG1Q9H6L5 497 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 THEGQ9P2T0 379 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 BLOC1S6Q9UL45 172 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 PRPF19Q9UMS4 504 aaKnown RBP21.68■■□□□ 1.06
TPM4-201ENST00000300933 REV3LO60673 3130 aa21.68■■□□□ 1.06
TPM4-201ENST00000300933 ZNF821O75541 412 aaPredicted RBP21.67■■□□□ 1.06
TPM4-201ENST00000300933 CES1P23141 567 aa21.67■■□□□ 1.06
TPM4-201ENST00000300933 NFKB2Q00653 900 aa21.67■■□□□ 1.06
TPM4-201ENST00000300933 BCL2L1Q07817 233 aa21.67■■□□□ 1.06
TPM4-201ENST00000300933 RFLNAQ6ZTI6 216 aa21.67■■□□□ 1.06
TPM4-201ENST00000300933 TUBGCP3Q96CW5 907 aa21.67■■□□□ 1.06
TPM4-201ENST00000300933 FAR2Q96K12 515 aa21.67■■□□□ 1.06
TPM4-201ENST00000300933 TCF12Q99081 682 aa21.67■■□□□ 1.06
TPM4-201ENST00000300933 LRRC3Q9BY71 257 aa21.67■■□□□ 1.06
TPM4-201ENST00000300933 CD274Q9NZQ7 290 aa21.67■■□□□ 1.06
TPM4-201ENST00000300933 DNMT3BQ9UBC3 853 aaKnown RBP21.67■■□□□ 1.06
TPM4-201ENST00000300933 RNF11Q9Y3C5 154 aa21.67■■□□□ 1.06
TPM4-201ENST00000300933 PRSS21Q9Y6M0 314 aa21.67■■□□□ 1.06
TPM4-201ENST00000300933 PLXNA4Q9HCM2 1894 aa21.67■■□□□ 1.06
TPM4-201ENST00000300933 E7ENX8 843 aa21.67■■□□□ 1.06
TPM4-201ENST00000300933 BOLA2-SMG1P6H3BVE0 249 aa21.67■■□□□ 1.06
TPM4-201ENST00000300933 LEFTY2O00292 366 aa21.67■■□□□ 1.06
TPM4-201ENST00000300933 TRIM24O15164 1050 aa21.67■■□□□ 1.06
TPM4-201ENST00000300933 IL2P60568 153 aa21.67■■□□□ 1.06
TPM4-201ENST00000300933 RETSATQ6NUM9 610 aa21.67■■□□□ 1.06
TPM4-201ENST00000300933 ZFP1Q6P2D0 407 aa21.67■■□□□ 1.06
TPM4-201ENST00000300933 CMTR2Q8IYT2 770 aaKnown RBP21.67■■□□□ 1.06
TPM4-201ENST00000300933 ZNF784Q8NCA9 323 aaPredicted RBP21.67■■□□□ 1.06
TPM4-201ENST00000300933 LKAAEAR1Q8TD35 194 aa21.67■■□□□ 1.06
TPM4-201ENST00000300933 TRIM8Q9BZR9 551 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms