RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 TBC1D4O60343 1298 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 KATNA1O75449 491 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 SLC22A3O75751 556 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 F11P03951 625 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 HNRNPCP07910 306 aaKnown RBP eCLIP12.76□□□□□ -0.37
HIF3A-204ENST00000300862 HSD17B1P14061 328 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 PSMA4P25789 261 aaKnown RBP12.76□□□□□ -0.37
HIF3A-204ENST00000300862 OR1D2P34982 312 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 HTR6P50406 440 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 CDK9P50750 372 aaKnown RBP12.76□□□□□ -0.37
HIF3A-204ENST00000300862 IL2P60568 153 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 ARF5P84085 180 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 LIPEQ05469 1076 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 GPNMBQ14956 572 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 ZNF554Q86TJ5 538 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 ERI1Q8IV48 349 aaKnown RBP12.76□□□□□ -0.37
HIF3A-204ENST00000300862 FNDC5Q8NAU1 212 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 ZUFSPQ96AP4 578 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 ALG2Q9H553 416 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 SOX17Q9H6I2 414 aaPredicted RBP12.76□□□□□ -0.37
HIF3A-204ENST00000300862 RIMKLBQ9ULI2 386 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 ABT1Q9ULW3 272 aaKnown RBP12.76□□□□□ -0.37
HIF3A-204ENST00000300862 ZNF840PA6NDX5 716 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 CCDC154A6NI56 674 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 H3BNH8 94 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 E2F3O00716 465 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 GIPC1O14908 333 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 SYNCRIPO60506 623 aaKnown RBP12.76□□□□□ -0.37
HIF3A-204ENST00000300862 STC2O76061 302 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 CD160O95971 181 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 C1RP00736 705 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 GALTP07902 379 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 IL10P22301 178 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 MZF1P28698 734 aaPredicted RBP12.76□□□□□ -0.37
HIF3A-204ENST00000300862 KPNA1P52294 538 aaPredicted RBP12.76□□□□□ -0.37
HIF3A-204ENST00000300862 ERVPABLB-1P60509 514 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 RCAN2Q14206 197 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 INPP5AQ14642 412 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 ADRM1Q16186 407 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 ATXN7L2Q5T6C5 722 aaPredicted RBP12.76□□□□□ -0.37
HIF3A-204ENST00000300862 LETMD1Q6P1Q0 360 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 PRMT9Q6P2P2 845 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 SLC2A7Q6PXP3 512 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 GPRIN3Q6ZVF9 776 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 LRRC8DQ7L1W4 858 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 RALGPS2Q86X27 583 aaPredicted RBP12.76□□□□□ -0.37
HIF3A-204ENST00000300862 FIBCD1Q8N539 461 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 NKAPQ8N5F7 415 aaKnown RBP12.76□□□□□ -0.37
HIF3A-204ENST00000300862 FBXO22Q8NEZ5 403 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 TFAP2CQ92754 450 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 RMND5BQ96G75 393 aaPredicted RBP12.76□□□□□ -0.37
HIF3A-204ENST00000300862 SEPHS2Q99611 448 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 KCTD14Q9BQ13 255 aaPredicted RBP12.76□□□□□ -0.37
HIF3A-204ENST00000300862 TTPALQ9BTX7 342 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 AGPAT4Q9NRZ5 378 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 ACTR3BQ9P1U1 418 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 MYRFQ9Y2G1 1151 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 PCDHB9Q9Y5E1 797 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 CHD5Q8TDI0 1954 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 C2orf78A6NCI8 922 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 AQP12BA6NM10 295 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 GOLGA8CPA6NN73 597 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 TBKBP1A7MCY6 615 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 H0YJX3 145 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 CHEK2O96017 543 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 ALPIP09923 528 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 PRR35P0CG20 571 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 UROSP10746 265 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 CA5AP35218 305 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 STT3AP46977 705 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 POLR2JP52435 117 aaKnown RBP12.75□□□□□ -0.37
HIF3A-204ENST00000300862 TGFBIQ15582 683 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 C5orf22Q49AR2 442 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 C6orf136Q5SQH8 315 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 LPCAT2Q7L5N7 544 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 AQP12AQ8IXF9 295 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 SDR16C5Q8N3Y7 309 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 EID2BQ96D98 161 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 STARD7Q9NQZ5 370 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 LRFN2Q9ULH4 789 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 TDRKHQ9Y2W6 561 aaKnown RBP12.75□□□□□ -0.37
HIF3A-204ENST00000300862 FCF1Q9Y324 198 aaKnown RBP12.75□□□□□ -0.37
HIF3A-204ENST00000300862 COMMD10Q9Y6G5 202 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 ANKRD36A6QL64 1941 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 MOXD2PA6NHM9 499 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 CLDN11O75508 207 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 CNPP09543 421 aaKnown RBP12.75□□□□□ -0.37
HIF3A-204ENST00000300862 FASP25445 335 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 TTPAP49638 278 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 XKR7Q5GH72 579 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 HECTD3Q5T447 861 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 LCN8Q6JVE9 175 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 OGFOD2Q6N063 350 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 CXorf57Q6NSI4 855 aaKnown RBP12.75□□□□□ -0.37
HIF3A-204ENST00000300862 Q6ZSR9 355 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 LRRC43Q8N309 656 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 ZNF786Q8N393 782 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 OR56A4Q8NGH8 313 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 CYGBQ8WWM9 190 aa12.75□□□□□ -0.37
HIF3A-204ENST00000300862 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms