RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 PAGE1O75459 146 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 BANF1O75531 89 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 NOMO1Q15155 1222 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 SAMD14Q8IZD0 417 aaPredicted RBP7.91□□□□□ -1.14
LIMD1-201ENST00000273317 SUN5Q8TC36 379 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 EFHD2Q96C19 240 aaPredicted RBP7.91□□□□□ -1.14
LIMD1-201ENST00000273317 GAD1Q99259 594 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 LGR4Q9BXB1 951 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 PLEKHA1Q9HB21 404 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 LRRC4CQ9HCJ2 640 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 PCDH18Q9HCL0 1135 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 PDE10AQ9Y233 779 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 PRORSD1PA6NEY8 169 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 DDTLA6NHG4 134 aaPredicted RBP7.91□□□□□ -1.14
LIMD1-201ENST00000273317 CD247P20963 164 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 GALK1P51570 392 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 CDH8P55286 799 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 RBM48Q5RL73 367 aaKnown RBP7.91□□□□□ -1.14
LIMD1-201ENST00000273317 SERPINA13PQ6UXR4 307 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 CPNE9Q8IYJ1 553 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 CYP4X1Q8N118 509 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 INO80EQ8NBZ0 244 aaPredicted RBP7.91□□□□□ -1.14
LIMD1-201ENST00000273317 CCDC115Q96NT0 180 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 CAMK1GQ96NX5 476 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 GPER1Q99527 375 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 KAT8Q9H7Z6 458 aaKnown RBP7.91□□□□□ -1.14
LIMD1-201ENST00000273317 PHPT1Q9NRX4 125 aaPredicted RBP7.91□□□□□ -1.14
LIMD1-201ENST00000273317 MYPNQ86TC9 1320 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 SLC25A14O95258 325 aaPredicted RBP7.91□□□□□ -1.14
LIMD1-201ENST00000273317 KCNA5P22460 613 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 PTGS2P35354 604 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 ECT2LQ008S8 904 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 LIN52Q52LA3 116 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 RAP1GAP2Q684P5 730 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 VSIG10LQ86VR7 867 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 UBR7Q8N806 425 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 C17orf50Q8WW18 174 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 DNAJC19Q96DA6 116 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 AARSD1Q9BTE6 412 aaKnown RBP7.91□□□□□ -1.14
LIMD1-201ENST00000273317 NDST3O95803 873 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 C8GP07360 202 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 PRPS2P11908 318 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 RNASEH2BQ5TBB1 312 aaKnown RBP7.91□□□□□ -1.14
LIMD1-201ENST00000273317 STRADAQ7RTN6 431 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 CBR4Q8N4T8 237 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 LRRC20Q8TCA0 184 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 SIPA1Q96FS4 1042 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 ART5Q96L15 291 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 RBM7Q9Y580 266 aaKnown RBP7.91□□□□□ -1.14
LIMD1-201ENST00000273317 UBIAD1Q9Y5Z9 338 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 ASXL3Q9C0F0 2248 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 PXDNQ92626 1479 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 PPP2R2BQ00005 443 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 CBFBQ13951 182 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 TPGS1Q6ZTW0 290 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 TOP1MTQ969P6 601 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 NMUR2Q9GZQ4 415 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 ERVW-1Q9UQF0 538 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 DGKBQ9Y6T7 804 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 LYPLA2O95372 231 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 CCNFP41002 786 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 SRSF11Q05519 484 aaKnown RBP7.9□□□□□ -1.14
LIMD1-201ENST00000273317 BNIP1Q12981 228 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 C15orf52Q6ZUT6 534 aaKnown RBP7.9□□□□□ -1.14
LIMD1-201ENST00000273317 PPTC7Q8NI37 304 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 DCAKDQ8WVC6 231 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 RFT1Q96AA3 541 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 C8orf48Q96LL4 319 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 PRDM12Q9H4Q4 367 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 PNPOQ9NVS9 261 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 ZNF639Q9UID6 485 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 GALNT7Q86SF2 657 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 AMIGO1Q86WK6 493 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 PLD4Q96BZ4 506 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 ATRXP46100 2492 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 B4GALT4O60513 344 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 CCR10P46092 362 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 C9orf57Q5W0N0 161 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 MON1BQ7L1V2 547 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 PIGZQ86VD9 579 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 RBM15BQ8NDT2 890 aaKnown RBP7.9□□□□□ -1.14
LIMD1-201ENST00000273317 C9orf43Q8TAL5 461 aaPredicted RBP7.9□□□□□ -1.14
LIMD1-201ENST00000273317 FAXDC2Q96IV6 333 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 PPM1MQ96MI6 270 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 SCGB3A2Q96PL1 93 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 DENND2DQ9H6A0 471 aaPredicted RBP7.9□□□□□ -1.14
LIMD1-201ENST00000273317 TELO2Q9Y4R8 837 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 TRIM3O75382 744 aaPredicted RBP7.9□□□□□ -1.14
LIMD1-201ENST00000273317 ZBTB6Q15916 424 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 NOMO2Q5JPE7 1267 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 CES5AQ6NT32 575 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 DNAAF5Q86Y56 855 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 CNPPD1Q9BV87 410 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 RC3H2Q9HBD1 1191 aaKnown RBP7.9□□□□□ -1.14
LIMD1-201ENST00000273317 TMEM39AQ9NV64 488 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 ZNF224Q9NZL3 707 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 TCAF1Q9Y4C2 921 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 UBXN7O94888 489 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 ETS2P15036 469 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 HSD17B2P37059 387 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms