RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 ERVK-6Q9BXR3 956 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 MYLK2Q9H1R3 596 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 GSTO2Q9H4Y5 243 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 UBE2ZQ9H832 354 aaPredicted RBP16.15■□□□□ 0.18
TPM1-201ENST00000267996 KCNK12Q9HB15 430 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 DNAJC28Q9NX36 388 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 KCTD5Q9NXV2 234 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 MBD1Q9UIS9 605 aaPredicted RBP16.15■□□□□ 0.18
TPM1-201ENST00000267996 TMCO1Q9UM00 188 aa16.15■□□□□ 0.18
TPM1-201ENST00000267996 SPTBN5Q9NRC6 3674 aaKnown RBP16.15■□□□□ 0.18
TPM1-201ENST00000267996 EIF3FO00303 357 aaPredicted RBP16.14■□□□□ 0.18
TPM1-201ENST00000267996 SOX1O00570 391 aaPredicted RBP16.14■□□□□ 0.18
TPM1-201ENST00000267996 AP1G1O43747 822 aa16.14■□□□□ 0.18
TPM1-201ENST00000267996 SGTAO43765 313 aa16.14■□□□□ 0.18
TPM1-201ENST00000267996 MAGEC1O60732 1142 aa16.14■□□□□ 0.18
TPM1-201ENST00000267996 RECQL5O94762 991 aaPredicted RBP16.14■□□□□ 0.18
TPM1-201ENST00000267996 OR56A5P0C7T3 313 aa16.14■□□□□ 0.18
TPM1-201ENST00000267996 C6P13671 934 aa16.14■□□□□ 0.18
TPM1-201ENST00000267996 ITGB6P18564 788 aa16.14■□□□□ 0.18
TPM1-201ENST00000267996 MPSTP25325 297 aa16.14■□□□□ 0.18
TPM1-201ENST00000267996 NTSR1P30989 418 aa16.14■□□□□ 0.18
TPM1-201ENST00000267996 TIE1P35590 1138 aa16.14■□□□□ 0.18
TPM1-201ENST00000267996 RGS4P49798 205 aa16.14■□□□□ 0.18
TPM1-201ENST00000267996 DPTQ07507 201 aa16.14■□□□□ 0.18
TPM1-201ENST00000267996 BNIP1Q12981 228 aa16.14■□□□□ 0.18
TPM1-201ENST00000267996 GBX1Q14549 363 aa16.14■□□□□ 0.18
TPM1-201ENST00000267996 KHDC1Q4VXA5 237 aaKnown RBP16.14■□□□□ 0.18
TPM1-201ENST00000267996 UNC50Q53HI1 259 aa16.14■□□□□ 0.18
TPM1-201ENST00000267996 ACSBG2Q5FVE4 666 aa16.14■□□□□ 0.18
TPM1-201ENST00000267996 LDLRAP1Q5SW96 308 aa16.14■□□□□ 0.18
TPM1-201ENST00000267996 FRMD7Q6ZUT3 714 aa16.14■□□□□ 0.18
TPM1-201ENST00000267996 PLCD3Q8N3E9 789 aa16.14■□□□□ 0.18
TPM1-201ENST00000267996 PTGR2Q8N8N7 351 aaPredicted RBP16.14■□□□□ 0.18
TPM1-201ENST00000267996 STON2Q8WXE9 905 aa16.14■□□□□ 0.18
TPM1-201ENST00000267996 DCUN1D1Q96GG9 259 aa16.14■□□□□ 0.18
TPM1-201ENST00000267996 LIMD1Q9UGP4 676 aa16.14■□□□□ 0.18
TPM1-201ENST00000267996 CFAP99D6REC4 459 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 MATN2O00339 956 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 ADH1BP00325 375 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 SOD1P00441 154 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 EGFP01133 1207 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 CBSLP0DN79 551 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 C7P10643 843 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 C5AR1P21730 350 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 SERPINB3P29508 390 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 CBSP35520 551 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 RPL14P50914 215 aaKnown RBP16.14■□□□□ 0.17
TPM1-201ENST00000267996 HK3P52790 923 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 SEC13P55735 322 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 TUBB3Q13509 450 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 TTLL9Q3SXZ7 439 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 FAM91A1Q658Y4 838 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 CYHR1Q6ZMK1 362 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 ADAMTSL2Q86TH1 951 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 MTDHQ86UE4 582 aaKnown RBP16.14■□□□□ 0.17
TPM1-201ENST00000267996 GPSM1Q86YR5 675 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 AADATQ8N5Z0 425 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 OR2T3Q8NH03 318 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 ERP27Q96DN0 273 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 C1QTNF3Q9BXJ4 246 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 ZDHHC2Q9UIJ5 367 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 CNOT6Q9ULM6 557 aaKnown RBP16.14■□□□□ 0.17
TPM1-201ENST00000267996 SLC12A4Q9UP95 1085 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 PIAS3Q9Y6X2 628 aa16.14■□□□□ 0.17
TPM1-201ENST00000267996 SLCO1B7G3V0H7 640 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 STX16-NPEPL1H3BU86 382 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 STX16O14662 325 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 MID1O15344 667 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 SYNCRIPO60506 623 aaKnown RBP16.13■□□□□ 0.17
TPM1-201ENST00000267996 MMP20O60882 483 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 RNASEH1O60930 286 aaKnown RBP16.13■□□□□ 0.17
TPM1-201ENST00000267996 DRD1P21728 446 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 AOAHP28039 575 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 AKT1P31749 480 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 CCR7P32248 378 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 IDH3AP50213 366 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 COPAP53621 1224 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 TAS2R38P59533 333 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 RPS14P62263 151 aaKnown RBP16.13■□□□□ 0.17
TPM1-201ENST00000267996 PFKFB4Q16877 469 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 AGBL4Q5VU57 503 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 EPGNQ6UW88 154 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 SBSNQ6UWP8 590 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 RAB44Q7Z6P3 723 aaPredicted RBP16.13■□□□□ 0.17
TPM1-201ENST00000267996 CLNKQ7Z7G1 428 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 FBXO39Q8N4B4 442 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 EXT2Q93063 718 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 FAM131CQ96AQ9 280 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 NUS1Q96E22 293 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 FAM161BQ96MY7 647 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 EBF4Q9BQW3 602 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 PHF7Q9BWX1 381 aaPredicted RBP16.13■□□□□ 0.17
TPM1-201ENST00000267996 FBRSQ9HAH7 460 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 VTI1BQ9UEU0 232 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 COQ6Q9Y2Z9 468 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 RRP15Q9Y3B9 282 aaKnown RBP16.13■□□□□ 0.17
TPM1-201ENST00000267996 UNC80Q8N2C7 3258 aa16.13■□□□□ 0.17
TPM1-201ENST00000267996 SUPT3HB4E1H0 165 aa16.12■□□□□ 0.17
TPM1-201ENST00000267996 ANKRD65E5RJM6 399 aa16.12■□□□□ 0.17
TPM1-201ENST00000267996 QSOX1O00391 747 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms