RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 DCKP27707 260 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 KPNA1P52294 538 aaPredicted RBP12.26□□□□□ -0.45
CHMP3-201ENST00000263856 RPL38P63173 70 aaKnown RBP12.26□□□□□ -0.45
CHMP3-201ENST00000263856 TIAL1Q01085 375 aaKnown RBP eCLIP12.26□□□□□ -0.45
CHMP3-201ENST00000263856 PRKG2Q13237 762 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 FAM98BQ52LJ0 330 aaKnown RBP12.26□□□□□ -0.45
CHMP3-201ENST00000263856 MANEALQ5VSG8 457 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 DCDC5Q6ZRR9 648 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 GPRIN3Q6ZVF9 776 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 TMEM199Q8N511 208 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 SYTL2Q9HCH5 934 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 CD320Q9NPF0 282 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 AIG1Q9NVV5 245 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 PCDHGC4Q9Y5F7 938 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 SNX5Q9Y5X3 404 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 TCRBV5S2A0A599 114 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 MOXD2PA6NHM9 499 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 SYCE1LA8MT33 242 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 TBC1D4O60343 1298 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 KERAO60938 352 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 CBFA2T3O75081 653 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 SERPINF2P08697 491 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 SLC2A4P14672 509 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 STC1P52823 247 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 RCAN2Q14206 197 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 RGS21Q2M5E4 152 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 TAF2Q6P1X5 1199 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 GPSM1Q86YR5 675 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 ZBTB8BQ8NAP8 495 aaPredicted RBP12.26□□□□□ -0.45
CHMP3-201ENST00000263856 ZNF555Q8NEP9 628 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 ARRDC2Q8TBH0 407 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 TANKQ92844 425 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 MYEOVQ96EZ4 313 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 ASB2Q96Q27 587 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 NACA2Q9H009 215 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 RAD21L1Q9H4I0 556 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 SPO11Q9Y5K1 396 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 LAMA3Q16787 3333 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 TMEM247A6NEH6 219 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 MROH6A6NGR9 719 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 G3V2T6 193 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 DFNA5O60443 496 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 IGLV3-25P01717 112 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 GSSP48637 474 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 EIF2B2P49770 351 aaKnown RBP12.26□□□□□ -0.45
CHMP3-201ENST00000263856 CPT1AP50416 773 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 HLCSP50747 726 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 DAG1Q14118 895 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 GRB14Q14449 540 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 PTGR1Q14914 329 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 CARTPTQ16568 116 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 C6orf136Q5SQH8 315 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 MSANTD2Q6P1R3 559 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 CRTC3Q6UUV7 619 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 PHACTR4Q8IZ21 702 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 KLHDC9Q8NEP7 349 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 STON2Q8WXE9 905 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 RSPH1Q8WYR4 309 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 BHMTQ93088 406 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 TRIM62Q9BVG3 475 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 RIC8BQ9NVN3 520 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 ZNF225Q9UK10 706 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 BAG5Q9UL15 447 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 XPNPEP2O43895 674 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 MATN4O95460 622 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 GSNP06396 782 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 CDH3P22223 829 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 TTKP33981 857 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 OR1G1P47890 313 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 MLLT10P55197 1068 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 IL5RAQ01344 420 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 RELAQ04206 551 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 FPGSQ05932 587 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 PSAPL1Q6NUJ1 521 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 FAM171BQ6P995 826 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 ZNF773Q6PK81 442 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 SAPCD2Q86UD0 394 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 CCDC117Q8IWD4 279 aaPredicted RBP12.25□□□□□ -0.45
CHMP3-201ENST00000263856 OR56A4Q8NGH8 313 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 FBXO32Q969P5 355 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 FUBP1Q96AE4 644 aaKnown RBP12.25□□□□□ -0.45
CHMP3-201ENST00000263856 SEPT5Q99719 369 aaPredicted RBP12.25□□□□□ -0.45
CHMP3-201ENST00000263856 EGFL8Q99944 293 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 LRRC3Q9BY71 257 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 ARNT2Q9HBZ2 717 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 ADGRE2Q9UHX3 823 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 FKBPLQ9UIM3 349 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 INVSQ9Y283 1065 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 RBMX2Q9Y388 322 aaKnown RBP12.25□□□□□ -0.45
CHMP3-201ENST00000263856 PCDHGA8Q9Y5G5 932 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 SLC30A1Q9Y6M5 507 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 MGEA5O60502 916 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 ANXA6P08133 673 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 FGF4P08620 206 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 RHOQP17081 205 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 PIGAP37287 484 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 GCNT7Q6ZNI0 430 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 THAP5Q7Z6K1 395 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 PROKR1Q8TCW9 393 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 GLMNQ92990 594 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms