RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 MYCP01106 439 aaPredicted RBP16.24■□□□□ 0.19
HOXD3-201ENST00000249440 GNAO1P09471 354 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 ATF6P18850 670 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 HK3P52790 923 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 ADARP55265 1226 aaKnown RBP16.24■□□□□ 0.19
HOXD3-201ENST00000249440 TGFBIQ15582 683 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 RTP2Q5QGT7 225 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 C6orf136Q5SQH8 315 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 NANOGP8Q6NSW7 305 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 FUT10Q6P4F1 479 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 SCIMPQ6UWF3 145 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 LPCAT2Q7L5N7 544 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 ERI1Q8IV48 349 aaKnown RBP16.24■□□□□ 0.19
HOXD3-201ENST00000249440 KIAA2013Q8IYS2 634 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 TBC1D21Q8IYX1 336 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 ESAMQ96AP7 390 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 GLT1D1Q96MS3 346 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 SMIM14Q96QK8 99 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 ZNF382Q96SR6 550 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 C1orf50Q9BV19 199 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 NANOGQ9H9S0 305 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 CD320Q9NPF0 282 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 MARCH5Q9NX47 278 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 ANAPC2Q9UJX6 822 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 TCRBV5S2A0A599 114 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 SYNCRIPO60506 623 aaKnown RBP16.24■□□□□ 0.19
HOXD3-201ENST00000249440 OR4F21O95013 312 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 ESR1P03372 595 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 RFC2P35250 354 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 PTGER3P43115 390 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 ESRRGP62508 458 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 PRKG2Q13237 762 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 LRRC23Q53EV4 343 aaPredicted RBP16.24■□□□□ 0.19
HOXD3-201ENST00000249440 PROSER1Q86XN7 944 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 CPNE9Q8IYJ1 553 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 ZNF786Q8N393 782 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 EFHBQ8N7U6 833 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 CDYL2Q8N8U2 506 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 PAPD5Q8NDF8 572 aaKnown RBP16.24■□□□□ 0.19
HOXD3-201ENST00000249440 PROKR1Q8TCW9 393 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 SEPT8Q92599 483 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 OCEL1Q9H607 264 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 BPIFA1Q9NP55 256 aa16.24■□□□□ 0.19
HOXD3-201ENST00000249440 EIF2B4Q9UI10 523 aaKnown RBP16.24■□□□□ 0.19
HOXD3-201ENST00000249440 FNDC3AQ9Y2H6 1198 aaKnown RBP16.24■□□□□ 0.19
HOXD3-201ENST00000249440 KLHL33A6NCF5 533 aa16.23■□□□□ 0.19
HOXD3-201ENST00000249440 H7C0S8 307 aa16.23■□□□□ 0.19
HOXD3-201ENST00000249440 ACOX3O15254 700 aa16.23■□□□□ 0.19
HOXD3-201ENST00000249440 C1RP00736 705 aa16.23■□□□□ 0.19
HOXD3-201ENST00000249440 F11P03951 625 aa16.23■□□□□ 0.19
HOXD3-201ENST00000249440 ENO2P09104 434 aaPredicted RBP16.23■□□□□ 0.19
HOXD3-201ENST00000249440 NCK1P16333 377 aa16.23■□□□□ 0.19
HOXD3-201ENST00000249440 HTR1EP28566 365 aa16.23■□□□□ 0.19
HOXD3-201ENST00000249440 ELAVL2Q12926 359 aaKnown RBP16.23■□□□□ 0.19
HOXD3-201ENST00000249440 TIGD2Q4W5G0 525 aa16.23■□□□□ 0.19
HOXD3-201ENST00000249440 ANKS3Q6ZW76 656 aa16.23■□□□□ 0.19
HOXD3-201ENST00000249440 SLAMF8Q9P0V8 285 aa16.23■□□□□ 0.19
HOXD3-201ENST00000249440 PCDHB7Q9Y5E2 793 aa16.23■□□□□ 0.19
HOXD3-201ENST00000249440 A0A1B0GVM2 712 aa16.23■□□□□ 0.19
HOXD3-201ENST00000249440 GRXCR2A6NFK2 248 aa16.23■□□□□ 0.19
HOXD3-201ENST00000249440 CDH15P55291 814 aa16.23■□□□□ 0.19
HOXD3-201ENST00000249440 EMX2Q04743 252 aa16.23■□□□□ 0.19
HOXD3-201ENST00000249440 PRR23BQ6ZRT6 265 aa16.23■□□□□ 0.19
HOXD3-201ENST00000249440 CHST9Q7L1S5 443 aa16.23■□□□□ 0.19
HOXD3-201ENST00000249440 HID1Q8IV36 788 aa16.23■□□□□ 0.19
HOXD3-201ENST00000249440 STK40Q8N2I9 435 aa16.23■□□□□ 0.19
HOXD3-201ENST00000249440 PDZD8Q8NEN9 1154 aa16.23■□□□□ 0.19
HOXD3-201ENST00000249440 ADAMTS16Q8TE57 1224 aa16.23■□□□□ 0.19
HOXD3-201ENST00000249440 TMEM74Q96NL1 305 aa16.23■□□□□ 0.19
HOXD3-201ENST00000249440 LRRC3Q9BY71 257 aa16.23■□□□□ 0.19
HOXD3-201ENST00000249440 ELAC1Q9H777 363 aaKnown RBP16.23■□□□□ 0.19
HOXD3-201ENST00000249440 SARS2Q9NP81 518 aaKnown RBP16.23■□□□□ 0.19
HOXD3-201ENST00000249440 NUDT4Q9NZJ9 180 aa16.23■□□□□ 0.19
HOXD3-201ENST00000249440 TRIM64CA6NLI5 447 aa16.22■□□□□ 0.19
HOXD3-201ENST00000249440 SNAP91O60641 907 aa16.22■□□□□ 0.19
HOXD3-201ENST00000249440 GJB5O95377 273 aa16.22■□□□□ 0.19
HOXD3-201ENST00000249440 ARL1P40616 181 aaPredicted RBP16.22■□□□□ 0.19
HOXD3-201ENST00000249440 SLC11A1P49279 550 aa16.22■□□□□ 0.19
HOXD3-201ENST00000249440 HECTD3Q5T447 861 aa16.22■□□□□ 0.19
HOXD3-201ENST00000249440 Q6ZSR9 355 aa16.22■□□□□ 0.19
HOXD3-201ENST00000249440 TAS2R42Q7RTR8 314 aa16.22■□□□□ 0.19
HOXD3-201ENST00000249440 GPR141Q7Z602 305 aa16.22■□□□□ 0.19
HOXD3-201ENST00000249440 ZFAND4Q86XD8 727 aa16.22■□□□□ 0.19
HOXD3-201ENST00000249440 OR52B6Q8NGF0 335 aa16.22■□□□□ 0.19
HOXD3-201ENST00000249440 METTL6Q8TCB7 284 aa16.22■□□□□ 0.19
HOXD3-201ENST00000249440 PLD4Q96BZ4 506 aa16.22■□□□□ 0.19
HOXD3-201ENST00000249440 MUC3BQ9H195 1237 aa16.22■□□□□ 0.19
HOXD3-201ENST00000249440 INTS7Q9NVH2 962 aaKnown RBP16.22■□□□□ 0.19
HOXD3-201ENST00000249440 ASB1Q9Y576 335 aa16.22■□□□□ 0.19
HOXD3-201ENST00000249440 TNPO3Q9Y5L0 923 aaKnown RBP16.22■□□□□ 0.19
HOXD3-201ENST00000249440 GOLGA8CPA6NN73 597 aa16.22■□□□□ 0.19
HOXD3-201ENST00000249440 EI24O14681 340 aa16.22■□□□□ 0.19
HOXD3-201ENST00000249440 LDLRP01130 860 aa16.22■□□□□ 0.19
HOXD3-201ENST00000249440 IL12AP29459 219 aa16.22■□□□□ 0.19
HOXD3-201ENST00000249440 ERVPABLB-1P60509 514 aa16.22■□□□□ 0.19
HOXD3-201ENST00000249440 FXNQ16595 210 aa16.22■□□□□ 0.19
HOXD3-201ENST00000249440 FRA10AC1Q70Z53 315 aa16.22■□□□□ 0.19
HOXD3-201ENST00000249440 DPP10Q8N608 796 aa16.22■□□□□ 0.19
HOXD3-201ENST00000249440 DCBLD1Q8N8Z6 715 aa16.22■□□□□ 0.19
HOXD3-201ENST00000249440 CYGBQ8WWM9 190 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms