RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 LINC00615Q96LM1 132 aaPredicted RBP12.57□□□□□ -0.4
VPREB3-201ENST00000248948 COPS8Q99627 209 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.57□□□□□ -0.4
VPREB3-201ENST00000248948 EPB41L1Q9H4G0 881 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 UCK1Q9HA47 277 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 UGT1A7Q9HAW7 530 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 UGT1A10Q9HAW8 530 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 UGT1A8Q9HAW9 530 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 KCNK4Q9NYG8 393 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 SLC23A2Q9UGH3 650 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 AK5Q9Y6K8 562 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 IGHV1OR21-1A0A087WYE8 117 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 SRRM3A6NNA2 597 aaPredicted RBP12.56□□□□□ -0.4
VPREB3-201ENST00000248948 PDZK1P1A8MUH7 402 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 PPM1DO15297 605 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 SNX2O60749 519 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 ZSCAN5DPP0CG00 497 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 ETS1P14921 441 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 TCP1P17987 556 aaKnown RBP12.56□□□□□ -0.4
VPREB3-201ENST00000248948 TPSB2P20231 275 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 IDSP22304 550 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 CA5AP35218 305 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 PRLHRP49683 370 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 CTSCP53634 463 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 ERVPABLB-1P60509 514 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 TMPRSS15P98073 1019 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 ACVR1Q04771 509 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 CACNG1Q06432 222 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 ZFP36L1Q07352 338 aaKnown RBP12.56□□□□□ -0.4
VPREB3-201ENST00000248948 CCDC173Q0VFZ6 552 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 TPSAB1Q15661 275 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 SKIDA1Q1XH10 827 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 C3orf38Q5JPI3 329 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 ARMC3Q5W041 872 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 ABRAXAS1Q6UWZ7 409 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 B3GNT8Q7Z7M8 397 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 PRUNE1Q86TP1 453 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 AMZ2Q86W34 360 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 SLITRK4Q8IW52 837 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 RBM12BQ8IXT5 1001 aaKnown RBP12.56□□□□□ -0.4
VPREB3-201ENST00000248948 OR10G6Q8NH81 332 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 DCUN1D1Q96GG9 259 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 ZNF578Q96N58 590 aaPredicted RBP12.56□□□□□ -0.4
VPREB3-201ENST00000248948 SLC38A3Q99624 504 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 EPB41L5Q9HCM4 733 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 PIH1D1Q9NWS0 290 aaKnown RBP12.56□□□□□ -0.4
VPREB3-201ENST00000248948 TRMT1Q9NXH9 659 aaKnown RBP12.56□□□□□ -0.4
VPREB3-201ENST00000248948 ZDHHC3Q9NYG2 299 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 CPNE7Q9UBL6 633 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 SATB2Q9UPW6 733 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 DNAJC16Q9Y2G8 782 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 CELSR3Q9NYQ7 3312 aa12.56□□□□□ -0.4
VPREB3-201ENST00000248948 OR2AG2A6NM03 316 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 USP27XA6NNY8 438 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 TAF4O00268 1085 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 CCL22O00626 93 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 HGSO14964 777 aaPredicted RBP12.55□□□□□ -0.4
VPREB3-201ENST00000248948 CASC3O15234 703 aaKnown RBP12.55□□□□□ -0.4
VPREB3-201ENST00000248948 B4GAT1O43505 415 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 PHF2O75151 1096 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 MPOP05164 745 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 GSTM1P09488 218 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 TPH1P17752 444 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 XRCC1P18887 633 aaPredicted RBP12.55□□□□□ -0.4
VPREB3-201ENST00000248948 ADRA1DP25100 572 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 ACRV1P26436 265 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 ALDH4A1P30038 563 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 CSF2RBP32927 897 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 HALP42357 657 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 MAGEA6P43360 314 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 KCNJ1P48048 391 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 FNTAP49354 379 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 OR1D5P58170 312 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 GSTM4Q03013 218 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 TRA2AQ13595 282 aaKnown RBP eCLIP12.55□□□□□ -0.4
VPREB3-201ENST00000248948 ITIH4Q14624 930 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 GSE1Q14687 1217 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 FNBP1LQ5T0N5 605 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 TTC27Q6P3X3 843 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 AFTPHQ6ULP2 937 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 PIM3Q86V86 326 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 TRIM48Q8IWZ4 208 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 PPHLN1Q8NEY8 458 aaKnown RBP12.55□□□□□ -0.4
VPREB3-201ENST00000248948 OR4D9Q8NGE8 314 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 OR13J1Q8NGT2 312 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 COG1Q8WTW3 980 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.55□□□□□ -0.4
VPREB3-201ENST00000248948 CDKN2AIPNLQ96HQ2 116 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 SGSM3Q96HU1 749 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 MS4A14Q96JA4 679 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 IL22Q9GZX6 179 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 VPS37BQ9H9H4 285 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 ASCL3Q9NQ33 180 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 PRDM8Q9NQV8 689 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 THSD1Q9NS62 852 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 ATXN7L1Q9ULK2 861 aaPredicted RBP12.55□□□□□ -0.4
VPREB3-201ENST00000248948 TCAF1Q9Y4C2 921 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 ITPR1Q14643 2758 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 ZFHX4Q86UP3 3567 aa12.55□□□□□ -0.4
VPREB3-201ENST00000248948 DSPP15924 2871 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms