RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 FIG4Q92562 907 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 HSPH1Q92598 858 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 PTCD3Q96EY7 689 aaKnown RBP3.63□□□□□ -1.83
UFM1-201ENST00000239878 CCDC120Q96HB5 630 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 PCED1BQ96HM7 432 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 CLPTM1LQ96KA5 538 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 ZNF512Q96ME7 567 aaPredicted RBP3.63□□□□□ -1.83
UFM1-201ENST00000239878 ZNF641Q96N77 438 aaPredicted RBP3.63□□□□□ -1.83
UFM1-201ENST00000239878 GCNAQ96QF7 691 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 OLFM1Q99784 485 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 ZSCAN5AQ9BUG6 496 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 ACAT2Q9BWD1 397 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 BTBD1Q9H0C5 482 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 LHX5Q9H2C1 402 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 MS4A5Q9H3V2 200 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 CYP4F11Q9HBI6 524 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 ZNF334Q9HCZ1 680 aaPredicted RBP3.63□□□□□ -1.83
UFM1-201ENST00000239878 CISHQ9NSE2 258 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 THG1LQ9NWX6 298 aaKnown RBP3.63□□□□□ -1.83
UFM1-201ENST00000239878 RNF14Q9UBS8 474 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 GNPTGQ9UJJ9 305 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 TMEM59LQ9UK28 342 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 SMG5Q9UPR3 1016 aaKnown RBP3.63□□□□□ -1.83
UFM1-201ENST00000239878 EMC9Q9Y3B6 208 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 CDY1Q9Y6F8 540 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 CLUHO75153 1309 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 A0A0X1KG70 313 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 A8MUA0 341 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 FOXN3O00409 490 aaPredicted RBP3.63□□□□□ -1.83
UFM1-201ENST00000239878 PLOD2O00469 737 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 SHOXO15266 292 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 GYG2O15488 501 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 MSI1O43347 362 aaKnown RBP3.63□□□□□ -1.83
UFM1-201ENST00000239878 MMP20O60882 483 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 FKBP6O75344 327 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 BEST1O76090 585 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 SEMA3DO95025 777 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 HSPA4LO95757 839 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 IGLV3-27P01718 113 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 TP53P04637 393 aaPredicted RBP3.63□□□□□ -1.83
UFM1-201ENST00000239878 GSNP06396 782 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 NUDT17P0C025 328 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 FAM228BP0C875 321 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 MYF5P13349 255 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 KRT13P13646 458 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 CCDC130P13994 396 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 UCHL3P15374 230 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 PTPN1P18031 435 aaKnown RBP3.63□□□□□ -1.83
UFM1-201ENST00000239878 MC4RP32245 332 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 MTNR1BP49286 362 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 NDST1P52848 882 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 RAC1P63000 192 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 IL1RL1Q01638 556 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 GNA12Q03113 381 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 ZP2Q05996 745 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 TRPC3Q13507 836 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 SLC29A2Q14542 456 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 POU6F1Q14863 301 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 MPEG1Q2M385 716 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 C4orf17Q53FE4 359 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 PPM1LQ5SGD2 360 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 HP1BP3Q5SSJ5 553 aaPredicted RBP3.63□□□□□ -1.83
UFM1-201ENST00000239878 PRR23BQ6ZRT6 265 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 CLEC20AQ6ZU45 233 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 ARCQ7LC44 396 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 GPRIN1Q7Z2K8 1008 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 IRF2BP2Q7Z5L9 587 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 MTDHQ86UE4 582 aaKnown RBP3.63□□□□□ -1.83
UFM1-201ENST00000239878 TMPRSS6Q8IU80 811 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 HID1Q8IV36 788 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 DENND1CQ8IV53 801 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 CATSPER1Q8NEC5 780 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 SPPL2BQ8TCT7 592 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 RFFLQ8WZ73 363 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 MYLPFQ96A32 169 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 MCUR1Q96AQ8 359 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 ELMO3Q96BJ8 720 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 HDAC11Q96DB2 347 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 C18orf8Q96DM3 657 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 CHFRQ96EP1 664 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 MVB12AQ96EY5 273 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 REXO5Q96IC2 774 aaKnown RBP3.63□□□□□ -1.83
UFM1-201ENST00000239878 SEC22CQ9BRL7 303 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 PITPNM3Q9BZ71 974 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 TRIM31Q9BZY9 425 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 PITHD1Q9GZP4 211 aaPredicted RBP3.63□□□□□ -1.83
UFM1-201ENST00000239878 KLC2Q9H0B6 622 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 DDX47Q9H0S4 455 aaKnown RBP3.63□□□□□ -1.83
UFM1-201ENST00000239878 SLCO1B3Q9NPD5 702 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 BRD7Q9NPI1 651 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.63□□□□□ -1.83
UFM1-201ENST00000239878 TAS2R1Q9NYW7 299 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 STMN3Q9NZ72 180 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 DAPK2Q9UIK4 370 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 ZFP69BQ9UJL9 534 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 STOML2Q9UJZ1 356 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 SLC13A4Q9UKG4 626 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 MKL2Q9ULH7 1088 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 TMEM5Q9Y2B1 443 aa3.63□□□□□ -1.83
UFM1-201ENST00000239878 VWA7Q9Y334 891 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms