RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 LCN8Q6JVE9 175 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 FAM217AQ8IXS0 508 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 MFSD2AQ8NA29 543 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 ZBED2Q9BTP6 218 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 C1QTNF3Q9BXJ4 246 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 LHX3Q9UBR4 397 aa21.97■■□□□ 1.11
CCDC9-201ENST00000221922 LRRC14BA6NHZ5 514 aa21.96■■□□□ 1.11
CCDC9-201ENST00000221922 TEX28O15482 410 aa21.96■■□□□ 1.11
CCDC9-201ENST00000221922 AKAP10O43572 662 aa21.96■■□□□ 1.11
CCDC9-201ENST00000221922 SNAP91O60641 907 aa21.96■■□□□ 1.11
CCDC9-201ENST00000221922 LBPP18428 481 aa21.96■■□□□ 1.11
CCDC9-201ENST00000221922 ADARP55265 1226 aaKnown RBP21.96■■□□□ 1.11
CCDC9-201ENST00000221922 KRT80Q6KB66 452 aa21.96■■□□□ 1.11
CCDC9-201ENST00000221922 PSAPL1Q6NUJ1 521 aa21.96■■□□□ 1.11
CCDC9-201ENST00000221922 EFL1Q7Z2Z2 1120 aaKnown RBP21.96■■□□□ 1.11
CCDC9-201ENST00000221922 STK40Q8N2I9 435 aa21.96■■□□□ 1.11
CCDC9-201ENST00000221922 CARNMT1Q8N4J0 409 aa21.96■■□□□ 1.11
CCDC9-201ENST00000221922 TRIML2Q8N7C3 387 aa21.96■■□□□ 1.11
CCDC9-201ENST00000221922 FUBP1Q96AE4 644 aaKnown RBP21.96■■□□□ 1.11
CCDC9-201ENST00000221922 RMND5BQ96G75 393 aaPredicted RBP21.96■■□□□ 1.11
CCDC9-201ENST00000221922 NSUN5Q96P11 429 aaKnown RBP21.96■■□□□ 1.11
CCDC9-201ENST00000221922 TIMMDC1Q9NPL8 285 aa21.96■■□□□ 1.11
CCDC9-201ENST00000221922 SLC52A3Q9NQ40 469 aa21.96■■□□□ 1.11
CCDC9-201ENST00000221922 OR51B4Q9Y5P0 310 aa21.96■■□□□ 1.11
CCDC9-201ENST00000221922 ANGPT2O15123 496 aa21.95■■□□□ 1.11
CCDC9-201ENST00000221922 KLK8O60259 260 aa21.95■■□□□ 1.11
CCDC9-201ENST00000221922 LILRB3O75022 631 aa21.95■■□□□ 1.11
CCDC9-201ENST00000221922 CRCPO75575 148 aa21.95■■□□□ 1.11
CCDC9-201ENST00000221922 PCSK6P29122 969 aa21.95■■□□□ 1.11
CCDC9-201ENST00000221922 RHOAP61586 193 aa21.95■■□□□ 1.11
CCDC9-201ENST00000221922 FOXM1Q08050 763 aa21.95■■□□□ 1.11
CCDC9-201ENST00000221922 LINGO4Q6UY18 593 aa21.95■■□□□ 1.11
CCDC9-201ENST00000221922 DDIASQ8IXT1 998 aa21.95■■□□□ 1.11
CCDC9-201ENST00000221922 PIANPQ8IYJ0 282 aa21.95■■□□□ 1.11
CCDC9-201ENST00000221922 FAM110BQ8TC76 370 aa21.95■■□□□ 1.11
CCDC9-201ENST00000221922 EZH1Q92800 747 aaPredicted RBP21.95■■□□□ 1.11
CCDC9-201ENST00000221922 KCNJ9Q92806 393 aa21.95■■□□□ 1.11
CCDC9-201ENST00000221922 SLC45A3Q96JT2 553 aa21.95■■□□□ 1.11
CCDC9-201ENST00000221922 FEM1AQ9BSK4 669 aa21.95■■□□□ 1.11
CCDC9-201ENST00000221922 AGPAT4Q9NRZ5 378 aa21.95■■□□□ 1.11
CCDC9-201ENST00000221922 GIMAP2Q9UG22 337 aa21.95■■□□□ 1.11
CCDC9-201ENST00000221922 PLOD2O00469 737 aa21.95■■□□□ 1.1
CCDC9-201ENST00000221922 BTN3A1O00481 513 aa21.95■■□□□ 1.1
CCDC9-201ENST00000221922 SLC6A2P23975 617 aa21.95■■□□□ 1.1
CCDC9-201ENST00000221922 MZF1P28698 734 aaPredicted RBP21.95■■□□□ 1.1
CCDC9-201ENST00000221922 PTGER3P43115 390 aa21.95■■□□□ 1.1
CCDC9-201ENST00000221922 CDKN1CP49918 316 aaPredicted RBP21.95■■□□□ 1.1
CCDC9-201ENST00000221922 NME5P56597 212 aa21.95■■□□□ 1.1
CCDC9-201ENST00000221922 IL2P60568 153 aa21.95■■□□□ 1.1
CCDC9-201ENST00000221922 INPP5AQ14642 412 aa21.95■■□□□ 1.1
CCDC9-201ENST00000221922 UGT3A1Q6NUS8 523 aa21.95■■□□□ 1.1
CCDC9-201ENST00000221922 ARL14EPQ8N8R7 260 aaPredicted RBP21.95■■□□□ 1.1
CCDC9-201ENST00000221922 TSPEARQ8WU66 669 aa21.95■■□□□ 1.1
CCDC9-201ENST00000221922 SMIM14Q96QK8 99 aa21.95■■□□□ 1.1
CCDC9-201ENST00000221922 NUSAP1Q9BXS6 441 aaKnown RBP21.95■■□□□ 1.1
CCDC9-201ENST00000221922 CAAP1Q9H8G2 361 aa21.95■■□□□ 1.1
CCDC9-201ENST00000221922 DDX18Q9NVP1 670 aaKnown RBP21.95■■□□□ 1.1
CCDC9-201ENST00000221922 GID8Q9NWU2 228 aa21.95■■□□□ 1.1
CCDC9-201ENST00000221922 CMTM6Q9NX76 183 aa21.95■■□□□ 1.1
CCDC9-201ENST00000221922 ACTR3BQ9P1U1 418 aa21.95■■□□□ 1.1
CCDC9-201ENST00000221922 POLG2Q9UHN1 485 aa21.95■■□□□ 1.1
CCDC9-201ENST00000221922 SLC8A2Q9UPR5 921 aa21.95■■□□□ 1.1
CCDC9-201ENST00000221922 PKP3Q9Y446 797 aa21.95■■□□□ 1.1
CCDC9-201ENST00000221922 DHRS12A0PJE2 317 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 NPEPPSL1A6NEC2 478 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 CDC7O00311 574 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 TRMUO75648 421 aaKnown RBP21.94■■□□□ 1.1
CCDC9-201ENST00000221922 MLYCDO95822 493 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 TIMP1P01033 207 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 ESR1P03372 595 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 MRPL19P49406 292 aaKnown RBP21.94■■□□□ 1.1
CCDC9-201ENST00000221922 CTSL3PQ5NE16 218 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 TBCELQ5QJ74 424 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 TXNDC8Q6A555 127 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 BLOC1S3Q6QNY0 202 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 CAMK1DQ8IU85 385 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 FIBCD1Q8N539 461 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 B4GALNT2Q8NHY0 566 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 BEGAINQ9BUH8 593 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 CLK4Q9HAZ1 481 aaKnown RBP21.94■■□□□ 1.1
CCDC9-201ENST00000221922 IL1RL2Q9HB29 575 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 PFDN4Q9NQP4 134 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 DNMT3BQ9UBC3 853 aaKnown RBP21.94■■□□□ 1.1
CCDC9-201ENST00000221922 RSL24D1Q9UHA3 163 aaKnown RBP21.94■■□□□ 1.1
CCDC9-201ENST00000221922 CPQQ9Y646 472 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 GOLGA8CPA6NN73 597 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 DLGAP1O14490 977 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 NIPSNAP2O75323 286 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 BMP10O95393 424 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 HGFP14210 728 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 IDO1P14902 403 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 CSF2RAP15509 400 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 CDK9P50750 372 aaKnown RBP21.94■■□□□ 1.1
CCDC9-201ENST00000221922 ZXDBP98169 803 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 DENND4CQ5VZ89 1909 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 OGFOD2Q6N063 350 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 SPPL2CQ8IUH8 684 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 GRIN3AQ8TCU5 1115 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 TUBGCP3Q96CW5 907 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 LRRC58Q96CX6 371 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms