RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Smarcd2Q99JR8 531 aaKnown RBP25.5■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Tmem68Q9D850 329 aa25.5■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Apobec2Q9WV35 224 aa25.5■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Bag6Q9Z1R2 1154 aaKnown RBP25.5■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Btnl6A2CG22 539 aa25.49■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Nxpe3B9EKK6 559 aa25.49■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Zbtb10E9Q8X5 861 aa25.49■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Rhox2gL7MUB9 191 aa25.49■■□□□ 1.67
Tpm1-216ENSMUST00000113707 MlxO08609 298 aa25.49■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Krt4P07744 525 aa25.49■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Glb1l2Q3UPY5 636 aa25.49■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Six3Q62233 333 aa25.49■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Capn11Q6J756 714 aa25.49■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Dennd2cQ6P9P8 914 aa25.49■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Slc43a1Q8BSM7 564 aa25.49■■□□□ 1.67
Tpm1-216ENSMUST00000113707 SowahcQ8C0J6 512 aa25.49■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Ssx2ipQ8VC66 615 aa25.49■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Olfr1311Q8VET0 312 aa25.49■■□□□ 1.67
Tpm1-216ENSMUST00000113707 4930513O06RikQ9D549 161 aa25.49■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Maml3D4QGC2 1135 aa25.49■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Vmn1r55E9Q8I6 310 aa25.49■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Klkb1P26262 638 aa25.49■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Adh5P28474 374 aa25.49■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Ephx3Q3V1F8 367 aa25.49■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Fastkd1Q6DI86 829 aa25.49■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Anapc2Q8BZQ7 837 aa25.49■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Utp11Q9CZJ1 253 aaKnown RBP25.49■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Ptk2bQ9QVP9 1009 aa25.49■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Gm14781A2A9Q9 366 aa25.48■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Vmn2r2L7N2E9 908 aa25.48■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Ltb4rO88855 351 aa25.48■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Pou4f1P17208 421 aa25.48■■□□□ 1.67
Tpm1-216ENSMUST00000113707 WarsP32921 481 aa25.48■■□□□ 1.67
Tpm1-216ENSMUST00000113707 TekQ02858 1122 aa25.48■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Mageb5Q14AN0 366 aa25.48■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Kcna5Q61762 602 aa25.48■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Magee1Q6PCZ4 918 aaKnown RBP25.48■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Serpinb10Q8K1K6 397 aa25.48■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Zfp940Q8R2Q3 566 aa25.48■■□□□ 1.67
Tpm1-216ENSMUST00000113707 PclafQ9CQX4 110 aaKnown RBP25.48■■□□□ 1.67
Tpm1-216ENSMUST00000113707 FancgQ9EQR6 623 aa25.48■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Kcne5Q9QZ26 143 aa25.48■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Gm8108K7N734 216 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Bub1O08901 1058 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Akt1P31750 480 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Pdha2P35487 391 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Naa20P61600 178 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 WasP70315 520 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Fgf13P70377 245 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Cgref1Q8R1U2 281 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 BsndQ8VIM4 307 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Jph2Q9ET78 696 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Cdh13Q9WTR5 714 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Gm6509A0A0J9YUV1 481 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Iqca1lA6H690 825 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Apol11bE9PUZ0 337 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Gm597E9Q8J5 896 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Fam181aJ3QNB7 292 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Gm6351K9J7D1 481 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 P01664 111 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Scg5P12961 212 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Slc2a3P32037 493 aaKnown RBP25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Dsc3P55850 896 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Traf6P70196 530 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Npy2rP97295 381 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Ppm1hQ3UYC0 513 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Ankrd9Q8BH83 326 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Exd1Q8CDF7 570 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 HibchQ8QZS1 385 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Cdkal1Q91WE6 578 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Nt5c1bQ91YE9 573 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 VapbQ9QY76 243 aaKnown RBP25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Nphs1Q9QZS7 1256 aa25.47■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Zfc3h1B2RT41 1992 aaKnown RBP25.46■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Igkv10-95A0A0G2JFY3 115 aa25.46■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Ssxb6A2BI74 170 aa25.46■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Zfp788E9Q980 884 aa25.46■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Gm20671F6TVX7 576 aa25.46■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Alkal1J3QPP8 127 aa25.46■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Rgs4O08899 205 aa25.46■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Dnmt3aO88508 908 aaKnown RBP25.46■■□□□ 1.67
Tpm1-216ENSMUST00000113707 JunP05627 334 aa25.46■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Sipa1P46062 1037 aa25.46■■□□□ 1.67
Tpm1-216ENSMUST00000113707 AdslP54822 484 aa25.46■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Slc8a1P70414 970 aa25.46■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Prdm4Q80V63 803 aa25.46■■□□□ 1.67
Tpm1-216ENSMUST00000113707 CptpQ8BS40 216 aa25.46■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Cd207Q8VBX4 331 aa25.46■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Aff4Q9ESC8 1160 aa25.46■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Epb41l4bQ9JMC8 527 aa25.46■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Pla2g2fQ9QZT4 168 aa25.46■■□□□ 1.67
Tpm1-216ENSMUST00000113707 ProdhQ9WU79 599 aa25.46■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Slc25a14Q9Z2B2 325 aa25.46■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Olfr566A0A1B0GST0 319 aa25.45■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Gm21731A0A286YDE9 180 aa25.45■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Catsperg2C6KI89 1145 aa25.45■■□□□ 1.67
Tpm1-216ENSMUST00000113707 4930455H04RikD3Z622 58 aa25.45■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Atp6v1b2P62814 511 aa25.45■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Rps17P63276 135 aaKnown RBP25.45■■□□□ 1.67
Tpm1-216ENSMUST00000113707 Marveld2Q3UZP0 555 aa25.45■■□□□ 1.67
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms