RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 KCNN4O15554 427 aa24.86■■□□□ 1.57
VEGFA-230ENST00000640482 PRAMEF10O60809 474 aa24.86■■□□□ 1.57
VEGFA-230ENST00000640482 PTMAP06454 111 aaKnown RBP24.86■■□□□ 1.57
VEGFA-230ENST00000640482 THRAP10827 490 aa24.86■■□□□ 1.57
VEGFA-230ENST00000640482 ZNF7P17097 686 aaPredicted RBP24.86■■□□□ 1.57
VEGFA-230ENST00000640482 EPHA4P54764 986 aa24.86■■□□□ 1.57
VEGFA-230ENST00000640482 CFHR1Q03591 330 aa24.86■■□□□ 1.57
VEGFA-230ENST00000640482 ANKRD20A2Q5SQ80 823 aa24.86■■□□□ 1.57
VEGFA-230ENST00000640482 ANKRD20A1Q5TYW2 823 aa24.86■■□□□ 1.57
VEGFA-230ENST00000640482 ANKRD20A3Q5VUR7 823 aa24.86■■□□□ 1.57
VEGFA-230ENST00000640482 AGBL5Q8NDL9 886 aa24.86■■□□□ 1.57
VEGFA-230ENST00000640482 CCDC112Q8NEF3 446 aa24.86■■□□□ 1.57
VEGFA-230ENST00000640482 TTC25Q96NG3 672 aa24.86■■□□□ 1.57
VEGFA-230ENST00000640482 PPP1R2P1Q96PQ5 205 aa24.86■■□□□ 1.57
VEGFA-230ENST00000640482 FICDQ9BVA6 458 aa24.86■■□□□ 1.57
VEGFA-230ENST00000640482 ZCCHC2Q9C0B9 1178 aaKnown RBP24.86■■□□□ 1.57
VEGFA-230ENST00000640482 WDR70Q9NW82 654 aa24.86■■□□□ 1.57
VEGFA-230ENST00000640482 CPNE7Q9UBL6 633 aa24.86■■□□□ 1.57
VEGFA-230ENST00000640482 TMPRSS11EQ9UL52 423 aa24.86■■□□□ 1.57
VEGFA-230ENST00000640482 MIF4GDA9UHW6 222 aaKnown RBP24.85■■□□□ 1.57
VEGFA-230ENST00000640482 ATXN7O15265 892 aaPredicted RBP24.85■■□□□ 1.57
VEGFA-230ENST00000640482 AGTP01019 485 aa24.85■■□□□ 1.57
VEGFA-230ENST00000640482 LIPCP11150 499 aa24.85■■□□□ 1.57
VEGFA-230ENST00000640482 CD82P27701 267 aa24.85■■□□□ 1.57
VEGFA-230ENST00000640482 CSTF2P33240 577 aaKnown RBP eCLIP24.85■■□□□ 1.57
VEGFA-230ENST00000640482 TMEM115Q12893 351 aaPredicted RBP24.85■■□□□ 1.57
VEGFA-230ENST00000640482 ITGA9Q13797 1035 aa24.85■■□□□ 1.57
VEGFA-230ENST00000640482 AADACL2Q6P093 401 aa24.85■■□□□ 1.57
VEGFA-230ENST00000640482 FAM151BQ6UXP7 276 aa24.85■■□□□ 1.57
VEGFA-230ENST00000640482 CCDC81Q6ZN84 652 aa24.85■■□□□ 1.57
VEGFA-230ENST00000640482 SPC24Q8NBT2 197 aa24.85■■□□□ 1.57
VEGFA-230ENST00000640482 LSM14AQ8ND56 463 aaKnown RBP24.85■■□□□ 1.57
VEGFA-230ENST00000640482 SNRNP27Q8WVK2 155 aaKnown RBP24.85■■□□□ 1.57
VEGFA-230ENST00000640482 CCNL2Q96S94 520 aaPredicted RBP24.85■■□□□ 1.57
VEGFA-230ENST00000640482 FAM118BQ9BPY3 351 aa24.85■■□□□ 1.57
VEGFA-230ENST00000640482 EPB41L1Q9H4G0 881 aa24.85■■□□□ 1.57
VEGFA-230ENST00000640482 SLC23A2Q9UGH3 650 aa24.85■■□□□ 1.57
VEGFA-230ENST00000640482 SCN8AQ9UQD0 1980 aa24.85■■□□□ 1.57
VEGFA-230ENST00000640482 GLYATL1P3A0A0U1RQE8 302 aa24.84■■□□□ 1.57
VEGFA-230ENST00000640482 GOLGA6L9A6NEM1 432 aa24.84■■□□□ 1.57
VEGFA-230ENST00000640482 GOLGA6L6A8MZA4 724 aa24.84■■□□□ 1.57
VEGFA-230ENST00000640482 C9orf172C9J069 976 aa24.84■■□□□ 1.57
VEGFA-230ENST00000640482 TK2O00142 265 aa24.84■■□□□ 1.57
VEGFA-230ENST00000640482 STX7O15400 261 aaKnown RBP24.84■■□□□ 1.57
VEGFA-230ENST00000640482 VCLP18206 1134 aa24.84■■□□□ 1.57
VEGFA-230ENST00000640482 MPSTP25325 297 aa24.84■■□□□ 1.57
VEGFA-230ENST00000640482 PSMB4P28070 264 aa24.84■■□□□ 1.57
VEGFA-230ENST00000640482 RHDQ02161 417 aa24.84■■□□□ 1.57
VEGFA-230ENST00000640482 CHRNA6Q15825 494 aa24.84■■□□□ 1.57
VEGFA-230ENST00000640482 KHDC1Q4VXA5 237 aaKnown RBP24.84■■□□□ 1.57
VEGFA-230ENST00000640482 LDLRAP1Q5SW96 308 aa24.84■■□□□ 1.57
VEGFA-230ENST00000640482 WDR74Q6RFH5 385 aaPredicted RBP24.84■■□□□ 1.57
VEGFA-230ENST00000640482 TRAPPC5Q8IUR0 188 aa24.84■■□□□ 1.57
VEGFA-230ENST00000640482 TTC13Q8NBP0 860 aa24.84■■□□□ 1.57
VEGFA-230ENST00000640482 LRRC45Q96CN5 670 aa24.84■■□□□ 1.57
VEGFA-230ENST00000640482 SPATA13Q96N96 652 aa24.84■■□□□ 1.57
VEGFA-230ENST00000640482 GORASP1Q9BQQ3 440 aa24.84■■□□□ 1.57
VEGFA-230ENST00000640482 DESI2Q9BSY9 194 aa24.84■■□□□ 1.57
VEGFA-230ENST00000640482 FOXJ2Q9P0K8 574 aa24.84■■□□□ 1.57
VEGFA-230ENST00000640482 TMEM9Q9P0T7 183 aa24.84■■□□□ 1.57
VEGFA-230ENST00000640482 DNAJC16Q9Y2G8 782 aa24.84■■□□□ 1.57
VEGFA-230ENST00000640482 C2orf81A6NN90 581 aa24.83■■□□□ 1.57
VEGFA-230ENST00000640482 PDZK1P1A8MUH7 402 aa24.83■■□□□ 1.57
VEGFA-230ENST00000640482 K7ENP7 123 aa24.83■■□□□ 1.57
VEGFA-230ENST00000640482 ERVH48-1M5A8F1 160 aa24.83■■□□□ 1.57
VEGFA-230ENST00000640482 CCL4P13236 92 aa24.83■■□□□ 1.57
VEGFA-230ENST00000640482 XRCC1P18887 633 aaPredicted RBP24.83■■□□□ 1.57
VEGFA-230ENST00000640482 UBE2IP63279 158 aaKnown RBP24.83■■□□□ 1.57
VEGFA-230ENST00000640482 INO80CQ6PI98 192 aaPredicted RBP24.83■■□□□ 1.57
VEGFA-230ENST00000640482 ZNF547Q8IVP9 402 aa24.83■■□□□ 1.57
VEGFA-230ENST00000640482 TRIM48Q8IWZ4 208 aa24.83■■□□□ 1.57
VEGFA-230ENST00000640482 CCDC110Q8TBZ0 833 aa24.83■■□□□ 1.57
VEGFA-230ENST00000640482 NCSTNQ92542 709 aa24.83■■□□□ 1.57
VEGFA-230ENST00000640482 TAAR9Q96RI9 348 aa24.83■■□□□ 1.57
VEGFA-230ENST00000640482 UCK1Q9HA47 277 aa24.83■■□□□ 1.57
VEGFA-230ENST00000640482 PDP2Q9P2J9 529 aa24.83■■□□□ 1.57
VEGFA-230ENST00000640482 TRIM10Q9UDY6 481 aa24.83■■□□□ 1.57
VEGFA-230ENST00000640482 PCDHB11Q9Y5F2 797 aa24.83■■□□□ 1.57
VEGFA-230ENST00000640482 BPTFQ12830 3046 aa24.83■■□□□ 1.56
VEGFA-230ENST00000640482 PTPRQQ9UMZ3 2332 aa24.83■■□□□ 1.56
VEGFA-230ENST00000640482 LILRA5A6NI73 299 aa24.82■■□□□ 1.56
VEGFA-230ENST00000640482 BUD23O43709 281 aaKnown RBP24.82■■□□□ 1.56
VEGFA-230ENST00000640482 KCNJ13O60928 360 aa24.82■■□□□ 1.56
VEGFA-230ENST00000640482 VIPP01282 170 aa24.82■■□□□ 1.56
VEGFA-230ENST00000640482 FGF3P11487 239 aaPredicted RBP24.82■■□□□ 1.56
VEGFA-230ENST00000640482 LPOP22079 712 aaPredicted RBP24.82■■□□□ 1.56
VEGFA-230ENST00000640482 IDSP22304 550 aa24.82■■□□□ 1.56
VEGFA-230ENST00000640482 ADRA1AP35348 466 aa24.82■■□□□ 1.56
VEGFA-230ENST00000640482 MAPK9P45984 424 aa24.82■■□□□ 1.56
VEGFA-230ENST00000640482 TAF1AQ15573 450 aaPredicted RBP24.82■■□□□ 1.56
VEGFA-230ENST00000640482 SEPT7Q16181 437 aaKnown RBP24.82■■□□□ 1.56
VEGFA-230ENST00000640482 RANBP10Q6VN20 620 aa24.82■■□□□ 1.56
VEGFA-230ENST00000640482 DDHD1Q8NEL9 900 aa24.82■■□□□ 1.56
VEGFA-230ENST00000640482 SLC39A7Q92504 469 aa24.82■■□□□ 1.56
VEGFA-230ENST00000640482 PACSIN2Q9UNF0 486 aaPredicted RBP24.82■■□□□ 1.56
VEGFA-230ENST00000640482 ARL5AQ9Y689 179 aa24.82■■□□□ 1.56
VEGFA-230ENST00000640482 UGT1A9O60656 530 aa24.81■■□□□ 1.56
VEGFA-230ENST00000640482 FTCDO95954 541 aa24.81■■□□□ 1.56
VEGFA-230ENST00000640482 UGT1A6P19224 532 aa24.81■■□□□ 1.56
VEGFA-230ENST00000640482 UGT1A1P22309 533 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms