RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 SLC38A3Q99624 504 aa17.46■□□□□ 0.39
PTPN11-207ENST00000639857 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.46■□□□□ 0.39
PTPN11-207ENST00000639857 LRRC40Q9H9A6 602 aa17.46■□□□□ 0.39
PTPN11-207ENST00000639857 UCK1Q9HA47 277 aa17.46■□□□□ 0.39
PTPN11-207ENST00000639857 ARFGAP3Q9NP61 516 aa17.46■□□□□ 0.39
PTPN11-207ENST00000639857 WASH6PQ9NQA3 447 aa17.46■□□□□ 0.39
PTPN11-207ENST00000639857 KCNK4Q9NYG8 393 aa17.46■□□□□ 0.39
PTPN11-207ENST00000639857 ACSL6Q9UKU0 697 aa17.46■□□□□ 0.39
PTPN11-207ENST00000639857 ITPR1Q14643 2758 aa17.45■□□□□ 0.38
PTPN11-207ENST00000639857 LAMA5O15230 3695 aa17.45■□□□□ 0.38
PTPN11-207ENST00000639857 KLHL33A6NCF5 533 aa17.45■□□□□ 0.38
PTPN11-207ENST00000639857 GAPDHSO14556 408 aaPredicted RBP17.45■□□□□ 0.38
PTPN11-207ENST00000639857 DUX1O43812 170 aa17.45■□□□□ 0.38
PTPN11-207ENST00000639857 PRAMEF1O95521 474 aa17.45■□□□□ 0.38
PTPN11-207ENST00000639857 EML2O95834 649 aa17.45■□□□□ 0.38
PTPN11-207ENST00000639857 JMJD7P0C870 316 aa17.45■□□□□ 0.38
PTPN11-207ENST00000639857 UGT1A5P35504 534 aa17.45■□□□□ 0.38
PTPN11-207ENST00000639857 UCNP55089 124 aa17.45■□□□□ 0.38
PTPN11-207ENST00000639857 DMPKQ09013 629 aa17.45■□□□□ 0.38
PTPN11-207ENST00000639857 MSLNQ13421 630 aaPredicted RBP17.45■□□□□ 0.38
PTPN11-207ENST00000639857 AMZ1Q400G9 498 aa17.45■□□□□ 0.38
PTPN11-207ENST00000639857 KHDC1Q4VXA5 237 aaKnown RBP17.45■□□□□ 0.38
PTPN11-207ENST00000639857 ZNF648Q5T619 568 aaPredicted RBP17.45■□□□□ 0.38
PTPN11-207ENST00000639857 MEI1Q5TIA1 1274 aa17.45■□□□□ 0.38
PTPN11-207ENST00000639857 AGAP9Q5VTM2 703 aa17.45■□□□□ 0.38
PTPN11-207ENST00000639857 C19orf48Q6RUI8 117 aa17.45■□□□□ 0.38
PTPN11-207ENST00000639857 SPACA3Q8IXA5 215 aa17.45■□□□□ 0.38
PTPN11-207ENST00000639857 GDAP1Q8TB36 358 aa17.45■□□□□ 0.38
PTPN11-207ENST00000639857 KCNE4Q8WWG9 221 aa17.45■□□□□ 0.38
PTPN11-207ENST00000639857 ZNF514Q96K75 400 aaPredicted RBP17.45■□□□□ 0.38
PTPN11-207ENST00000639857 RDH14Q9HBH5 336 aa17.45■□□□□ 0.38
PTPN11-207ENST00000639857 KLC4Q9NSK0 619 aa17.45■□□□□ 0.38
PTPN11-207ENST00000639857 R3HDM2Q9Y2K5 976 aaKnown RBP17.45■□□□□ 0.38
PTPN11-207ENST00000639857 LOXL2Q9Y4K0 774 aa17.45■□□□□ 0.38
PTPN11-207ENST00000639857 ARL5AQ9Y689 179 aa17.45■□□□□ 0.38
PTPN11-207ENST00000639857 DNMT3AQ9Y6K1 912 aaPredicted RBP17.45■□□□□ 0.38
PTPN11-207ENST00000639857 LILRA5A6NI73 299 aa17.44■□□□□ 0.38
PTPN11-207ENST00000639857 ERI2A8K979 691 aaKnown RBP17.44■□□□□ 0.38
PTPN11-207ENST00000639857 MTX2O75431 263 aa17.44■□□□□ 0.38
PTPN11-207ENST00000639857 XRCC1P18887 633 aaPredicted RBP17.44■□□□□ 0.38
PTPN11-207ENST00000639857 HADHAP40939 763 aa17.44■□□□□ 0.38
PTPN11-207ENST00000639857 LIMK2P53671 638 aa17.44■□□□□ 0.38
PTPN11-207ENST00000639857 TLE3Q04726 772 aa17.44■□□□□ 0.38
PTPN11-207ENST00000639857 RPS6KA1Q15418 735 aa17.44■□□□□ 0.38
PTPN11-207ENST00000639857 PHF19Q5T6S3 580 aa17.44■□□□□ 0.38
PTPN11-207ENST00000639857 DENND5AQ6IQ26 1287 aa17.44■□□□□ 0.38
PTPN11-207ENST00000639857 WDR74Q6RFH5 385 aaPredicted RBP17.44■□□□□ 0.38
PTPN11-207ENST00000639857 ABRAXAS1Q6UWZ7 409 aa17.44■□□□□ 0.38
PTPN11-207ENST00000639857 TMPRSS9Q7Z410 1059 aa17.44■□□□□ 0.38
PTPN11-207ENST00000639857 C11orf96Q7Z7L8 435 aa17.44■□□□□ 0.38
PTPN11-207ENST00000639857 PDZD3Q86UT5 571 aa17.44■□□□□ 0.38
PTPN11-207ENST00000639857 SLC13A5Q86YT5 568 aaPredicted RBP17.44■□□□□ 0.38
PTPN11-207ENST00000639857 TRAPPC5Q8IUR0 188 aa17.44■□□□□ 0.38
PTPN11-207ENST00000639857 TRIM58Q8NG06 486 aa17.44■□□□□ 0.38
PTPN11-207ENST00000639857 NUDT22Q9BRQ3 303 aa17.44■□□□□ 0.38
PTPN11-207ENST00000639857 TMEM121Q9BTD3 319 aa17.44■□□□□ 0.38
PTPN11-207ENST00000639857 OSGEPL1Q9H4B0 414 aa17.44■□□□□ 0.38
PTPN11-207ENST00000639857 CPNE7Q9UBL6 633 aa17.44■□□□□ 0.38
PTPN11-207ENST00000639857 IGHV5-10-1A0A0J9YXX1 117 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 TCRBV7S2A1N4TA0A589 114 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 AGAP14A8MT82 685 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 NVLO15381 856 aaKnown RBP17.43■□□□□ 0.38
PTPN11-207ENST00000639857 LIASO43766 372 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 SNX2O60749 519 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 AP2A1O95782 977 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 THRAP10827 490 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 ITPKBP27987 946 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 CSF2RBP32927 897 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 ZNF140P52738 457 aaPredicted RBP17.43■□□□□ 0.38
PTPN11-207ENST00000639857 GDF10P55107 478 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 UBE2IP63279 158 aaKnown RBP17.43■□□□□ 0.38
PTPN11-207ENST00000639857 CCZ1BP86790 482 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 CCZ1P86791 482 aaPredicted RBP17.43■□□□□ 0.38
PTPN11-207ENST00000639857 CCDC173Q0VFZ6 552 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 NFATC2Q13469 925 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 OASLQ15646 514 aaKnown RBP17.43■□□□□ 0.38
PTPN11-207ENST00000639857 LONRF2Q1L5Z9 754 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 GPRC6AQ5T6X5 926 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 BROXQ5VW32 411 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 TMEM71Q6P5X7 295 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 FOXR1Q6PIV2 292 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 LINC00523Q86TU6 105 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 RBM12BQ8IXT5 1001 aaKnown RBP17.43■□□□□ 0.38
PTPN11-207ENST00000639857 OR4K2Q8NGD2 314 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 ZNF398Q8TD17 642 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 ULK4Q96C45 1275 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 AHCYL2Q96HN2 611 aaKnown RBP17.43■□□□□ 0.38
PTPN11-207ENST00000639857 APOL2Q9BQE5 337 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 SEMA6CQ9H3T2 930 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 PRDM8Q9NQV8 689 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 POT1Q9NUX5 634 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 PDP2Q9P2J9 529 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 SLC23A2Q9UGH3 650 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 ZKSCAN5Q9Y2L8 839 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 SSUH2Q9Y2M2 353 aa17.43■□□□□ 0.38
PTPN11-207ENST00000639857 ZFYVE26Q68DK2 2539 aa17.42■□□□□ 0.38
PTPN11-207ENST00000639857 PMS2P1A4D2B8 440 aa17.42■□□□□ 0.38
PTPN11-207ENST00000639857 BUD23O43709 281 aaKnown RBP17.42■□□□□ 0.38
PTPN11-207ENST00000639857 SRP72O76094 671 aaKnown RBP17.42■□□□□ 0.38
PTPN11-207ENST00000639857 METTL18O95568 372 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms