RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 GEMP55040 296 aa17.47■□□□□ 0.39
PNKP-230ENST00000638016 GDF10P55107 478 aa17.47■□□□□ 0.39
PNKP-230ENST00000638016 KIF5AQ12840 1032 aa17.47■□□□□ 0.39
PNKP-230ENST00000638016 PEX6Q13608 980 aa17.47■□□□□ 0.39
PNKP-230ENST00000638016 SNAP47Q5SQN1 464 aa17.47■□□□□ 0.39
PNKP-230ENST00000638016 PCSK4Q6UW60 755 aa17.47■□□□□ 0.39
PNKP-230ENST00000638016 C11orf96Q7Z7L8 435 aa17.47■□□□□ 0.39
PNKP-230ENST00000638016 LRRTM4Q86VH4 590 aa17.47■□□□□ 0.39
PNKP-230ENST00000638016 ZFAND4Q86XD8 727 aa17.47■□□□□ 0.39
PNKP-230ENST00000638016 TAB3Q8N5C8 712 aaPredicted RBP17.47■□□□□ 0.39
PNKP-230ENST00000638016 SPATA13Q96N96 652 aa17.47■□□□□ 0.39
PNKP-230ENST00000638016 VPS35Q96QK1 796 aa17.47■□□□□ 0.39
PNKP-230ENST00000638016 CMKLR1Q99788 373 aa17.47■□□□□ 0.39
PNKP-230ENST00000638016 ZMYND15Q9H091 742 aa17.47■□□□□ 0.39
PNKP-230ENST00000638016 TRABDQ9H4I3 376 aa17.47■□□□□ 0.39
PNKP-230ENST00000638016 SARS2Q9NP81 518 aaKnown RBP17.47■□□□□ 0.39
PNKP-230ENST00000638016 PCDHGA7Q9Y5G6 932 aa17.47■□□□□ 0.39
PNKP-230ENST00000638016 GLYATL1P3A0A0U1RQE8 302 aa17.46■□□□□ 0.39
PNKP-230ENST00000638016 PRR19A6NJB7 356 aa17.46■□□□□ 0.39
PNKP-230ENST00000638016 A8MU76 341 aa17.46■□□□□ 0.39
PNKP-230ENST00000638016 CCL22O00626 93 aa17.46■□□□□ 0.39
PNKP-230ENST00000638016 TJP3O95049 919 aa17.46■□□□□ 0.39
PNKP-230ENST00000638016 BRAFP15056 766 aa17.46■□□□□ 0.39
PNKP-230ENST00000638016 RPL10P27635 214 aaKnown RBP17.46■□□□□ 0.39
PNKP-230ENST00000638016 MLLT3P42568 568 aaPredicted RBP17.46■□□□□ 0.39
PNKP-230ENST00000638016 TNNT3P45378 269 aaPredicted RBP17.46■□□□□ 0.39
PNKP-230ENST00000638016 DRG2P55039 364 aaKnown RBP17.46■□□□□ 0.39
PNKP-230ENST00000638016 TMPRSS3P57727 454 aa17.46■□□□□ 0.39
PNKP-230ENST00000638016 UBE2IP63279 158 aaKnown RBP17.46■□□□□ 0.39
PNKP-230ENST00000638016 TMEM115Q12893 351 aaPredicted RBP17.46■□□□□ 0.39
PNKP-230ENST00000638016 KLF1Q13351 362 aaPredicted RBP17.46■□□□□ 0.39
PNKP-230ENST00000638016 MSLNQ13421 630 aaPredicted RBP17.46■□□□□ 0.39
PNKP-230ENST00000638016 ITPRIPL1Q6GPH6 555 aa17.46■□□□□ 0.39
PNKP-230ENST00000638016 RANBP10Q6VN20 620 aa17.46■□□□□ 0.39
PNKP-230ENST00000638016 GPR155Q7Z3F1 870 aa17.46■□□□□ 0.39
PNKP-230ENST00000638016 TRAPPC5Q8IUR0 188 aa17.46■□□□□ 0.39
PNKP-230ENST00000638016 RASGEF1AQ8N9B8 481 aa17.46■□□□□ 0.39
PNKP-230ENST00000638016 OR4D9Q8NGE8 314 aa17.46■□□□□ 0.39
PNKP-230ENST00000638016 CALR3Q96L12 384 aaKnown RBP17.46■□□□□ 0.39
PNKP-230ENST00000638016 SRPK1Q96SB4 655 aaKnown RBP17.46■□□□□ 0.39
PNKP-230ENST00000638016 OCIAD1Q9NX40 245 aa17.46■□□□□ 0.39
PNKP-230ENST00000638016 HACD3Q9P035 362 aa17.46■□□□□ 0.39
PNKP-230ENST00000638016 ZNF624Q9P2J8 865 aaPredicted RBP17.46■□□□□ 0.39
PNKP-230ENST00000638016 CPNE7Q9UBL6 633 aa17.46■□□□□ 0.39
PNKP-230ENST00000638016 FKBPLQ9UIM3 349 aa17.46■□□□□ 0.39
PNKP-230ENST00000638016 WDR37Q9Y2I8 494 aa17.46■□□□□ 0.39
PNKP-230ENST00000638016 SSUH2Q9Y2M2 353 aa17.46■□□□□ 0.39
PNKP-230ENST00000638016 FASNP49327 2511 aaKnown RBP17.45■□□□□ 0.38
PNKP-230ENST00000638016 OR52A4PA6NMU1 304 aa17.45■□□□□ 0.38
PNKP-230ENST00000638016 PDZK1P1A8MUH7 402 aa17.45■□□□□ 0.38
PNKP-230ENST00000638016 KMOO15229 486 aa17.45■□□□□ 0.38
PNKP-230ENST00000638016 EFSO43281 561 aa17.45■□□□□ 0.38
PNKP-230ENST00000638016 VEGFDO43915 354 aa17.45■□□□□ 0.38
PNKP-230ENST00000638016 ANXA9O76027 345 aa17.45■□□□□ 0.38
PNKP-230ENST00000638016 METTL18O95568 372 aa17.45■□□□□ 0.38
PNKP-230ENST00000638016 FGF3P11487 239 aaPredicted RBP17.45■□□□□ 0.38
PNKP-230ENST00000638016 SLC19A1P41440 591 aa17.45■□□□□ 0.38
PNKP-230ENST00000638016 GPRC6AQ5T6X5 926 aa17.45■□□□□ 0.38
PNKP-230ENST00000638016 BROXQ5VW32 411 aa17.45■□□□□ 0.38
PNKP-230ENST00000638016 DENND5AQ6IQ26 1287 aa17.45■□□□□ 0.38
PNKP-230ENST00000638016 SLC9B2Q86UD5 537 aa17.45■□□□□ 0.38
PNKP-230ENST00000638016 VASH2Q86V25 355 aa17.45■□□□□ 0.38
PNKP-230ENST00000638016 FAM71DQ8N9W8 422 aa17.45■□□□□ 0.38
PNKP-230ENST00000638016 OR4K2Q8NGD2 314 aa17.45■□□□□ 0.38
PNKP-230ENST00000638016 OR13C4Q8NGS5 318 aa17.45■□□□□ 0.38
PNKP-230ENST00000638016 JPH3Q8WXH2 748 aaPredicted RBP17.45■□□□□ 0.38
PNKP-230ENST00000638016 ATG4AQ8WYN0 398 aa17.45■□□□□ 0.38
PNKP-230ENST00000638016 AHCYL2Q96HN2 611 aaKnown RBP17.45■□□□□ 0.38
PNKP-230ENST00000638016 DPH1Q9BZG8 443 aa17.45■□□□□ 0.38
PNKP-230ENST00000638016 PIH1D1Q9NWS0 290 aaKnown RBP17.45■□□□□ 0.38
PNKP-230ENST00000638016 KLHL3Q9UH77 587 aa17.45■□□□□ 0.38
PNKP-230ENST00000638016 PKP3Q9Y446 797 aa17.45■□□□□ 0.38
PNKP-230ENST00000638016 OR2AG2A6NM03 316 aa17.44■□□□□ 0.38
PNKP-230ENST00000638016 STX7O15400 261 aaKnown RBP17.44■□□□□ 0.38
PNKP-230ENST00000638016 DUX1O43812 170 aa17.44■□□□□ 0.38
PNKP-230ENST00000638016 PBLDP30039 288 aaPredicted RBP17.44■□□□□ 0.38
PNKP-230ENST00000638016 CLCNKAP51800 687 aa17.44■□□□□ 0.38
PNKP-230ENST00000638016 GPLD1P80108 840 aa17.44■□□□□ 0.38
PNKP-230ENST00000638016 TMPRSS15P98073 1019 aa17.44■□□□□ 0.38
PNKP-230ENST00000638016 KIAA1614Q5VZ46 1190 aa17.44■□□□□ 0.38
PNKP-230ENST00000638016 TMEM71Q6P5X7 295 aa17.44■□□□□ 0.38
PNKP-230ENST00000638016 FAM83HQ6ZRV2 1179 aaPredicted RBP17.44■□□□□ 0.38
PNKP-230ENST00000638016 DET1Q7L5Y6 550 aa17.44■□□□□ 0.38
PNKP-230ENST00000638016 UBL4BQ8N7F7 174 aa17.44■□□□□ 0.38
PNKP-230ENST00000638016 BEND7Q8N7W2 519 aaPredicted RBP17.44■□□□□ 0.38
PNKP-230ENST00000638016 OR10G6Q8NH81 332 aa17.44■□□□□ 0.38
PNKP-230ENST00000638016 NCSTNQ92542 709 aa17.44■□□□□ 0.38
PNKP-230ENST00000638016 RNF31Q96EP0 1072 aa17.44■□□□□ 0.38
PNKP-230ENST00000638016 HES6Q96HZ4 224 aa17.44■□□□□ 0.38
PNKP-230ENST00000638016 TBL1YQ9BQ87 522 aa17.44■□□□□ 0.38
PNKP-230ENST00000638016 TIMM29Q9BSF4 260 aa17.44■□□□□ 0.38
PNKP-230ENST00000638016 TMEM121Q9BTD3 319 aa17.44■□□□□ 0.38
PNKP-230ENST00000638016 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.44■□□□□ 0.38
PNKP-230ENST00000638016 OGFRQ9NZT2 677 aa17.44■□□□□ 0.38
PNKP-230ENST00000638016 SLC30A1Q9Y6M5 507 aa17.44■□□□□ 0.38
PNKP-230ENST00000638016 ATMQ13315 3056 aa17.44■□□□□ 0.38
PNKP-230ENST00000638016 KIR2DS5A0A0G2JLQ3 304 aa17.43■□□□□ 0.38
PNKP-230ENST00000638016 A0A0G2JNG1 304 aa17.43■□□□□ 0.38
PNKP-230ENST00000638016 GPR89AB7ZAQ6 455 aa17.43■□□□□ 0.38
PNKP-230ENST00000638016 KIR2DS3K7RE56 304 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms