RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 PTPN7P35236 360 aa18.7■□□□□ 0.58
CLN6-213ENST00000636212 EIF3EP60228 445 aaKnown RBP18.7■□□□□ 0.58
CLN6-213ENST00000636212 OTUD4Q01804 1114 aaKnown RBP18.7■□□□□ 0.58
CLN6-213ENST00000636212 ITGA9Q13797 1035 aa18.7■□□□□ 0.58
CLN6-213ENST00000636212 MANEAQ5SRI9 462 aa18.7■□□□□ 0.58
CLN6-213ENST00000636212 DARS2Q6PI48 645 aaKnown RBP18.7■□□□□ 0.58
CLN6-213ENST00000636212 WDR74Q6RFH5 385 aaPredicted RBP18.7■□□□□ 0.58
CLN6-213ENST00000636212 TRAPPC5Q8IUR0 188 aa18.7■□□□□ 0.58
CLN6-213ENST00000636212 SYCE1Q8N0S2 351 aa18.7■□□□□ 0.58
CLN6-213ENST00000636212 UBL4BQ8N7F7 174 aa18.7■□□□□ 0.58
CLN6-213ENST00000636212 ZSCAN1Q8NBB4 408 aa18.7■□□□□ 0.58
CLN6-213ENST00000636212 ACTL9Q8TC94 416 aa18.7■□□□□ 0.58
CLN6-213ENST00000636212 DTX3LQ8TDB6 740 aa18.7■□□□□ 0.58
CLN6-213ENST00000636212 SNRNP27Q8WVK2 155 aaKnown RBP18.7■□□□□ 0.58
CLN6-213ENST00000636212 WBP1Q96G27 269 aa18.7■□□□□ 0.58
CLN6-213ENST00000636212 OXNAD1Q96HP4 312 aaPredicted RBP18.7■□□□□ 0.58
CLN6-213ENST00000636212 CPNE7Q9UBL6 633 aa18.7■□□□□ 0.58
CLN6-213ENST00000636212 AMFRQ9UKV5 643 aa18.7■□□□□ 0.58
CLN6-213ENST00000636212 DNAJC16Q9Y2G8 782 aa18.7■□□□□ 0.58
CLN6-213ENST00000636212 ADGRG1Q9Y653 693 aa18.7■□□□□ 0.58
CLN6-213ENST00000636212 GLYATL1P3A0A0U1RQE8 302 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 A6NCN8 305 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 RCCD1A6NED2 376 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 STMND1H3BQB6 276 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 STX7O15400 261 aaKnown RBP18.69■□□□□ 0.58
CLN6-213ENST00000636212 PJA2O43164 708 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 MTX2O75431 263 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 RBP3P10745 1247 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 CCL4P13236 92 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 IDSP22304 550 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 MPSTP25325 297 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 CSF2RBP32927 897 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 CHRNA4P43681 627 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 ATP1A2P50993 1020 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 KIF5AQ12840 1032 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 TMEM115Q12893 351 aaPredicted RBP18.69■□□□□ 0.58
CLN6-213ENST00000636212 ATP13A5Q4VNC0 1218 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 SNAP47Q5SQN1 464 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 LDLRAP1Q5SW96 308 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 RAD9BQ6WBX8 426 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 PEX26Q7Z412 305 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 ZFAND4Q86XD8 727 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 FAM129CQ86XR2 697 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 TTC30BQ8N4P2 665 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 ASPSCR1Q9BZE9 553 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 SLC39A1Q9NY26 324 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 FOXJ2Q9P0K8 574 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 IL17CQ9P0M4 197 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 DUSP10Q9Y6W6 482 aa18.69■□□□□ 0.58
CLN6-213ENST00000636212 ZFC3H1O60293 1989 aaKnown RBP18.69■□□□□ 0.58
CLN6-213ENST00000636212 C2orf81A6NN90 581 aa18.68■□□□□ 0.58
CLN6-213ENST00000636212 C9orf172C9J069 976 aa18.68■□□□□ 0.58
CLN6-213ENST00000636212 KCNN4O15554 427 aa18.68■□□□□ 0.58
CLN6-213ENST00000636212 KCNJ13O60928 360 aa18.68■□□□□ 0.58
CLN6-213ENST00000636212 XRCC1P18887 633 aaPredicted RBP18.68■□□□□ 0.58
CLN6-213ENST00000636212 HALP42357 657 aa18.68■□□□□ 0.58
CLN6-213ENST00000636212 RAB15P59190 212 aa18.68■□□□□ 0.58
CLN6-213ENST00000636212 FAM151BQ6UXP7 276 aa18.68■□□□□ 0.58
CLN6-213ENST00000636212 PLXDC1Q8IUK5 500 aa18.68■□□□□ 0.58
CLN6-213ENST00000636212 TTC13Q8NBP0 860 aa18.68■□□□□ 0.58
CLN6-213ENST00000636212 ACRBPQ8NEB7 543 aa18.68■□□□□ 0.58
CLN6-213ENST00000636212 FICDQ9BVA6 458 aa18.68■□□□□ 0.58
CLN6-213ENST00000636212 IL26Q9NPH9 171 aa18.68■□□□□ 0.58
CLN6-213ENST00000636212 IMPACTQ9P2X3 320 aa18.68■□□□□ 0.58
CLN6-213ENST00000636212 PCDHGA3Q9Y5H0 932 aa18.68■□□□□ 0.58
CLN6-213ENST00000636212 LILRA5A6NI73 299 aa18.67■□□□□ 0.58
CLN6-213ENST00000636212 EFCAB7A8K855 629 aa18.67■□□□□ 0.58
CLN6-213ENST00000636212 A8MU76 341 aa18.67■□□□□ 0.58
CLN6-213ENST00000636212 MIF4GDA9UHW6 222 aaKnown RBP18.67■□□□□ 0.58
CLN6-213ENST00000636212 FGF3P11487 239 aaPredicted RBP18.67■□□□□ 0.58
CLN6-213ENST00000636212 AMD1P17707 334 aa18.67■□□□□ 0.58
CLN6-213ENST00000636212 CFHR1Q03591 330 aa18.67■□□□□ 0.58
CLN6-213ENST00000636212 TGIF1Q15583 401 aa18.67■□□□□ 0.58
CLN6-213ENST00000636212 CHRNA6Q15825 494 aa18.67■□□□□ 0.58
CLN6-213ENST00000636212 SEPT7Q16181 437 aaKnown RBP18.67■□□□□ 0.58
CLN6-213ENST00000636212 ANKRD20A2Q5SQ80 823 aa18.67■□□□□ 0.58
CLN6-213ENST00000636212 DCAF12Q5T6F0 453 aa18.67■□□□□ 0.58
CLN6-213ENST00000636212 ANKRD20A1Q5TYW2 823 aa18.67■□□□□ 0.58
CLN6-213ENST00000636212 ANKRD20A3Q5VUR7 823 aa18.67■□□□□ 0.58
CLN6-213ENST00000636212 RBM12BQ8IXT5 1001 aaKnown RBP18.67■□□□□ 0.58
CLN6-213ENST00000636212 ART4Q93070 314 aa18.67■□□□□ 0.58
CLN6-213ENST00000636212 CXorf40BQ96DE9 158 aa18.67■□□□□ 0.58
CLN6-213ENST00000636212 TEFMQ96QE5 360 aaKnown RBP18.67■□□□□ 0.58
CLN6-213ENST00000636212 DDA1Q9BW61 102 aa18.67■□□□□ 0.58
CLN6-213ENST00000636212 LACRTQ9GZZ8 138 aa18.67■□□□□ 0.58
CLN6-213ENST00000636212 C10orf88Q9H8K7 445 aa18.67■□□□□ 0.58
CLN6-213ENST00000636212 UCK1Q9HA47 277 aa18.67■□□□□ 0.58
CLN6-213ENST00000636212 POT1Q9NUX5 634 aa18.67■□□□□ 0.58
CLN6-213ENST00000636212 TMEM9Q9P0T7 183 aa18.67■□□□□ 0.58
CLN6-213ENST00000636212 PDP2Q9P2J9 529 aa18.67■□□□□ 0.58
CLN6-213ENST00000636212 REXO2Q9Y3B8 237 aaKnown RBP18.67■□□□□ 0.58
CLN6-213ENST00000636212 SCN8AQ9UQD0 1980 aa18.67■□□□□ 0.58
CLN6-213ENST00000636212 B4E171 279 aa18.66■□□□□ 0.58
CLN6-213ENST00000636212 AGTP01019 485 aa18.66■□□□□ 0.58
CLN6-213ENST00000636212 MSH3P20585 1137 aa18.66■□□□□ 0.58
CLN6-213ENST00000636212 LPOP22079 712 aaPredicted RBP18.66■□□□□ 0.58
CLN6-213ENST00000636212 AKT1P31749 480 aa18.66■□□□□ 0.58
CLN6-213ENST00000636212 TSPAN7P41732 249 aa18.66■□□□□ 0.58
CLN6-213ENST00000636212 PDE1BQ01064 536 aa18.66■□□□□ 0.58
CLN6-213ENST00000636212 TMEM26Q6ZUK4 368 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms