RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 ANKRD20A2Q5SQ80 823 aa16.96■□□□□ 0.31
SPTAN1-214ENST00000628614 ANKRD20A1Q5TYW2 823 aa16.96■□□□□ 0.31
SPTAN1-214ENST00000628614 TMEM164Q5U3C3 297 aa16.96■□□□□ 0.31
SPTAN1-214ENST00000628614 ANKRD20A3Q5VUR7 823 aa16.96■□□□□ 0.31
SPTAN1-214ENST00000628614 TMEM71Q6P5X7 295 aa16.96■□□□□ 0.31
SPTAN1-214ENST00000628614 DARS2Q6PI48 645 aaKnown RBP16.96■□□□□ 0.31
SPTAN1-214ENST00000628614 RCBTB1Q8NDN9 531 aa16.96■□□□□ 0.31
SPTAN1-214ENST00000628614 CCDC112Q8NEF3 446 aa16.96■□□□□ 0.31
SPTAN1-214ENST00000628614 GDAP1Q8TB36 358 aa16.96■□□□□ 0.31
SPTAN1-214ENST00000628614 BRSK1Q8TDC3 778 aa16.96■□□□□ 0.31
SPTAN1-214ENST00000628614 FICDQ9BVA6 458 aa16.96■□□□□ 0.31
SPTAN1-214ENST00000628614 ZCCHC2Q9C0B9 1178 aaKnown RBP16.96■□□□□ 0.31
SPTAN1-214ENST00000628614 IL26Q9NPH9 171 aa16.96■□□□□ 0.31
SPTAN1-214ENST00000628614 PRDM8Q9NQV8 689 aa16.96■□□□□ 0.31
SPTAN1-214ENST00000628614 CPNE7Q9UBL6 633 aa16.96■□□□□ 0.31
SPTAN1-214ENST00000628614 ZFC3H1O60293 1989 aaKnown RBP16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 SCN8AQ9UQD0 1980 aa16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 PRAMEF33A0A0G2JMD5 474 aa16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 GLYATL1P3A0A0U1RQE8 302 aa16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 GOLGA6L9A6NEM1 432 aa16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 PRAMEF10O60809 474 aa16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 LIPCP11150 499 aa16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 VCLP18206 1134 aa16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 CD82P27701 267 aa16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 PSMB4P28070 264 aa16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 CSTF2P33240 577 aaKnown RBP eCLIP16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 TMEM115Q12893 351 aaPredicted RBP16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 ITGA9Q13797 1035 aa16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 PLA2G4EQ3MJ16 856 aa16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 KHDC1Q4VXA5 237 aaKnown RBP16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 LDLRAP1Q5SW96 308 aa16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 ARHGAP40Q5TG30 622 aa16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 WDR74Q6RFH5 385 aaPredicted RBP16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 FAM151BQ6UXP7 276 aa16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 TRAPPC5Q8IUR0 188 aa16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 SPC24Q8NBT2 197 aa16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 AGBL5Q8NDL9 886 aa16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 SNRNP27Q8WVK2 155 aaKnown RBP16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 USP7Q93009 1102 aa16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 SPATA13Q96N96 652 aa16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 TTC25Q96NG3 672 aa16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 GORASP1Q9BQQ3 440 aa16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 DESI2Q9BSY9 194 aa16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 EPB41L1Q9H4G0 881 aa16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 TMPRSS11EQ9UL52 423 aa16.95■□□□□ 0.3
SPTAN1-214ENST00000628614 PDZK1P1A8MUH7 402 aa16.94■□□□□ 0.3
SPTAN1-214ENST00000628614 TK2O00142 265 aa16.94■□□□□ 0.3
SPTAN1-214ENST00000628614 ATXN7O15265 892 aaPredicted RBP16.94■□□□□ 0.3
SPTAN1-214ENST00000628614 STX7O15400 261 aaKnown RBP16.94■□□□□ 0.3
SPTAN1-214ENST00000628614 AGTP01019 485 aa16.94■□□□□ 0.3
SPTAN1-214ENST00000628614 RHDQ02161 417 aa16.94■□□□□ 0.3
SPTAN1-214ENST00000628614 CFHR1Q03591 330 aa16.94■□□□□ 0.3
SPTAN1-214ENST00000628614 CHRNA6Q15825 494 aa16.94■□□□□ 0.3
SPTAN1-214ENST00000628614 AADACL2Q6P093 401 aa16.94■□□□□ 0.3
SPTAN1-214ENST00000628614 CCDC81Q6ZN84 652 aa16.94■□□□□ 0.3
SPTAN1-214ENST00000628614 ZNF547Q8IVP9 402 aa16.94■□□□□ 0.3
SPTAN1-214ENST00000628614 TTC13Q8NBP0 860 aa16.94■□□□□ 0.3
SPTAN1-214ENST00000628614 LSM14AQ8ND56 463 aaKnown RBP16.94■□□□□ 0.3
SPTAN1-214ENST00000628614 LRRC45Q96CN5 670 aa16.94■□□□□ 0.3
SPTAN1-214ENST00000628614 CCNL2Q96S94 520 aaPredicted RBP16.94■□□□□ 0.3
SPTAN1-214ENST00000628614 FAM118BQ9BPY3 351 aa16.94■□□□□ 0.3
SPTAN1-214ENST00000628614 UCK1Q9HA47 277 aa16.94■□□□□ 0.3
SPTAN1-214ENST00000628614 TMEM9Q9P0T7 183 aa16.94■□□□□ 0.3
SPTAN1-214ENST00000628614 PDP2Q9P2J9 529 aa16.94■□□□□ 0.3
SPTAN1-214ENST00000628614 TRIM10Q9UDY6 481 aa16.94■□□□□ 0.3
SPTAN1-214ENST00000628614 SLC23A2Q9UGH3 650 aa16.94■□□□□ 0.3
SPTAN1-214ENST00000628614 DNAJC16Q9Y2G8 782 aa16.94■□□□□ 0.3
SPTAN1-214ENST00000628614 LILRA5A6NI73 299 aa16.93■□□□□ 0.3
SPTAN1-214ENST00000628614 PRR19A6NJB7 356 aa16.93■□□□□ 0.3
SPTAN1-214ENST00000628614 C2orf81A6NN90 581 aa16.93■□□□□ 0.3
SPTAN1-214ENST00000628614 C9orf172C9J069 976 aa16.93■□□□□ 0.3
SPTAN1-214ENST00000628614 K7ENP7 123 aa16.93■□□□□ 0.3
SPTAN1-214ENST00000628614 ERVH48-1M5A8F1 160 aa16.93■□□□□ 0.3
SPTAN1-214ENST00000628614 FTCDO95954 541 aa16.93■□□□□ 0.3
SPTAN1-214ENST00000628614 CCL4P13236 92 aa16.93■□□□□ 0.3
SPTAN1-214ENST00000628614 XRCC1P18887 633 aaPredicted RBP16.93■□□□□ 0.3
SPTAN1-214ENST00000628614 MPSTP25325 297 aa16.93■□□□□ 0.3
SPTAN1-214ENST00000628614 ADRA1AP35348 466 aa16.93■□□□□ 0.3
SPTAN1-214ENST00000628614 UBE2IP63279 158 aaKnown RBP16.93■□□□□ 0.3
SPTAN1-214ENST00000628614 TAF1AQ15573 450 aaPredicted RBP16.93■□□□□ 0.3
SPTAN1-214ENST00000628614 INO80CQ6PI98 192 aaPredicted RBP16.93■□□□□ 0.3
SPTAN1-214ENST00000628614 RANBP10Q6VN20 620 aa16.93■□□□□ 0.3
SPTAN1-214ENST00000628614 TRIM48Q8IWZ4 208 aa16.93■□□□□ 0.3
SPTAN1-214ENST00000628614 DDHD1Q8NEL9 900 aa16.93■□□□□ 0.3
SPTAN1-214ENST00000628614 CCDC110Q8TBZ0 833 aa16.93■□□□□ 0.3
SPTAN1-214ENST00000628614 TAAR9Q96RI9 348 aa16.93■□□□□ 0.3
SPTAN1-214ENST00000628614 WDR70Q9NW82 654 aa16.93■□□□□ 0.3
SPTAN1-214ENST00000628614 SMOXQ9NWM0 555 aa16.93■□□□□ 0.3
SPTAN1-214ENST00000628614 FOXJ2Q9P0K8 574 aa16.93■□□□□ 0.3
SPTAN1-214ENST00000628614 PACSIN2Q9UNF0 486 aaPredicted RBP16.93■□□□□ 0.3
SPTAN1-214ENST00000628614 ARL5AQ9Y689 179 aa16.93■□□□□ 0.3
SPTAN1-214ENST00000628614 C5orf60A6NFR6 353 aa16.92■□□□□ 0.3
SPTAN1-214ENST00000628614 BUD23O43709 281 aaKnown RBP16.92■□□□□ 0.3
SPTAN1-214ENST00000628614 UGT1A9O60656 530 aa16.92■□□□□ 0.3
SPTAN1-214ENST00000628614 KCNJ13O60928 360 aa16.92■□□□□ 0.3
SPTAN1-214ENST00000628614 PRAMEF1O95521 474 aa16.92■□□□□ 0.3
SPTAN1-214ENST00000628614 VIPP01282 170 aa16.92■□□□□ 0.3
SPTAN1-214ENST00000628614 FGF3P11487 239 aaPredicted RBP16.92■□□□□ 0.3
SPTAN1-214ENST00000628614 UGT1A6P19224 532 aa16.92■□□□□ 0.3
SPTAN1-214ENST00000628614 LPOP22079 712 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms