RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 RASGEF1CQ8N431 466 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 EMC1Q8N766 993 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 PPP4R1Q8TF05 950 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 POMGNT1Q8WZA1 660 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 HDAC2Q92769 488 aaKnown RBP3.18□□□□□ -1.9
VBP1-204ENST00000625964 PHF21AQ96BD5 680 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 KAT14Q9H8E8 782 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 EPB41L5Q9HCM4 733 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 TCP11L1Q9NUJ3 509 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 SETD4Q9NVD3 440 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 MTMR10Q9NXD2 777 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 TP53BP1Q12888 1972 aaPredicted RBP3.17□□□□□ -1.9
VBP1-204ENST00000625964 A0A087X0M5 115 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 A0A1B0GX30 115 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 A0A1W2PP11 408 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 PGPEP1LA6NFU8 196 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 SCAMP1O15126 338 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 GPC4O75487 556 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 SCGB1D1O95968 90 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 PRSS1P07477 247 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 TMEM11P17152 192 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 CDH2P19022 906 aaPredicted RBP3.17□□□□□ -1.9
VBP1-204ENST00000625964 CD53P19397 219 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 ANXA7P20073 488 aaKnown RBP3.17□□□□□ -1.9
VBP1-204ENST00000625964 ANOS1P23352 680 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 AHRP35869 848 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 MMP14P50281 582 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 MAMLD1Q13495 774 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 ACVR2BQ13705 512 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 EIF4A2Q14240 407 aaKnown RBP3.17□□□□□ -1.9
VBP1-204ENST00000625964 CCDC30Q5VVM6 783 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 SNX30Q5VWJ9 437 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 FAM180BQ6P0A1 224 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 TMEM154Q6P9G4 183 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 KLHL35Q6PF15 583 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 SARM1Q6SZW1 724 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 ATG9AQ7Z3C6 839 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 TEX11Q8IYF3 940 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 PM20D2Q8IYS1 436 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 NGEFQ8N5V2 710 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 TEX19Q8NA77 164 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 HJURPQ8NCD3 748 aaPredicted RBP3.17□□□□□ -1.9
VBP1-204ENST00000625964 CTCFLQ8NI51 663 aaPredicted RBP3.17□□□□□ -1.9
VBP1-204ENST00000625964 OXNAD1Q96HP4 312 aaPredicted RBP3.17□□□□□ -1.9
VBP1-204ENST00000625964 ZNF354BQ96LW1 612 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 CMTM3Q96MX0 182 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 NUDCD1Q96RS6 583 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 NCAPGQ9BPX3 1015 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 ITPAQ9BY32 194 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 TMEM39BQ9GZU3 492 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 FAM118AQ9NWS6 357 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 HCFC1R1Q9NWW0 138 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 KLHL9Q9P2J3 617 aa3.17□□□□□ -1.9
VBP1-204ENST00000625964 IGLV5-45A0A087WSX0 123 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 MYO1GB0I1T2 1018 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 FAM72CH0Y354 149 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 OGG1O15527 345 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 PLPP2O43688 288 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 SYNGR3O43761 229 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 IGHV4-39P01824 125 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 HIST1H2ABP04908 130 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 ACADMP11310 421 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 HIST1H2ADP20671 130 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 MSH2P43246 934 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 GLIPR1P48060 266 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 ARCN1P48444 511 aaKnown RBP3.16□□□□□ -1.9
VBP1-204ENST00000625964 PRAMEP78395 509 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 RPL24P83731 157 aaKnown RBP3.16□□□□□ -1.9
VBP1-204ENST00000625964 GAGE5Q13069 117 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 GAGE6Q13070 117 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 FAM72AQ5TYM5 149 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 PLA2G4FQ68DD2 849 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 FAM72DQ6L9T8 149 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 HIST3H2AQ7L7L0 130 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 FAM72BQ86X60 149 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 HACE1Q8IYU2 909 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 WDTC1Q8N5D0 677 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 SLC5A8Q8N695 610 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 ANKRD52Q8NB46 1076 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 GSDMBQ8TAX9 411 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 EVI5LQ96CN4 794 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 ST6GAL2Q96JF0 529 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 PGLYRP2Q96PD5 576 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 GAD1Q99259 594 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 FTOQ9C0B1 505 aaKnown RBP eCLIP3.16□□□□□ -1.93e-9■■□□□ 12.8
VBP1-204ENST00000625964 EGLN1Q9GZT9 426 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 PLK3Q9H4B4 646 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 B3GALT5Q9Y2C3 310 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 SESN1Q9Y6P5 492 aa3.16□□□□□ -1.9
VBP1-204ENST00000625964 CTAGE9A4FU28 777 aa3.15□□□□□ -1.9
VBP1-204ENST00000625964 PI4KAP2A4QPH2 592 aa3.15□□□□□ -1.9
VBP1-204ENST00000625964 ANKRD66B4E2M5 251 aa3.15□□□□□ -1.9
VBP1-204ENST00000625964 SMAD9O15198 467 aaKnown RBP3.15□□□□□ -1.9
VBP1-204ENST00000625964 ZBTB43O43298 467 aa3.15□□□□□ -1.9
VBP1-204ENST00000625964 HS6ST1O60243 411 aa3.15□□□□□ -1.9
VBP1-204ENST00000625964 USO1O60763 962 aaKnown RBP3.15□□□□□ -1.9
VBP1-204ENST00000625964 SRPRAP08240 638 aaKnown RBP3.15□□□□□ -1.9
VBP1-204ENST00000625964 KRT19P08727 400 aa3.15□□□□□ -1.9
VBP1-204ENST00000625964 CTAGE8P0CG41 777 aa3.15□□□□□ -1.9
VBP1-204ENST00000625964 ACTN1P12814 892 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms