RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 MMEL1Q495T6 779 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 FUT11Q495W5 492 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 TMEM240Q5SV17 173 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 GRAMD4Q6IC98 578 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 DDIASQ8IXT1 998 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 KBTBD2Q8IY47 623 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 RIN3Q8TB24 985 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 ECHDC3Q96DC8 303 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 TCEAL4Q96EI5 215 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 BOCQ9BWV1 1114 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 NUSAP1Q9BXS6 441 aaKnown RBP19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 CIPCQ9C0C6 399 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 NUDT4Q9NZJ9 180 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 CXXC1Q9P0U4 656 aaPredicted RBP19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 PCDHGA7Q9Y5G6 932 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 LAMA2P24043 3122 aaKnown RBP19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 GLYATL1P3A0A0U1RQE8 302 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 VPS4BO75351 444 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 FGF19O95750 216 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 SPAM1P38567 509 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 PSMD8P48556 350 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 CDC16Q13042 620 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 PLPP4Q5VZY2 271 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 C22orf39Q6P5X5 142 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 TMEM25Q86YD3 366 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 HGH1Q9BTY7 390 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 POLG2Q9UHN1 485 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 BCAP29Q9UHQ4 241 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 LRCH1Q9Y2L9 728 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 PPIL1Q9Y3C6 166 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 MYOFQ9NZM1 2061 aa19.49■□□□□ 0.71
PCDHB11-202ENST00000624887 NPIPB15A6NHN6 443 aaPredicted RBP19.49■□□□□ 0.71
PCDHB11-202ENST00000624887 H3BNX3 289 aa19.49■□□□□ 0.71
PCDHB11-202ENST00000624887 E2F3O00716 465 aa19.49■□□□□ 0.71
PCDHB11-202ENST00000624887 GRM6O15303 877 aa19.49■□□□□ 0.71
PCDHB11-202ENST00000624887 MOSPD3O75425 235 aa19.49■□□□□ 0.71
PCDHB11-202ENST00000624887 CRCPO75575 148 aa19.49■□□□□ 0.71
PCDHB11-202ENST00000624887 PTPN5P54829 565 aa19.49■□□□□ 0.71
PCDHB11-202ENST00000624887 PSME3P61289 254 aa19.49■□□□□ 0.71
PCDHB11-202ENST00000624887 FLOT2Q14254 428 aa19.49■□□□□ 0.71
PCDHB11-202ENST00000624887 GPR33Q49SQ1 333 aa19.49■□□□□ 0.71
PCDHB11-202ENST00000624887 PSRC1Q6PGN9 363 aaPredicted RBP19.49■□□□□ 0.71
PCDHB11-202ENST00000624887 PAOXQ6QHF9 649 aa19.49■□□□□ 0.71
PCDHB11-202ENST00000624887 ADAMTSL2Q86TH1 951 aa19.49■□□□□ 0.71
PCDHB11-202ENST00000624887 SYVN1Q86TM6 617 aa19.49■□□□□ 0.71
PCDHB11-202ENST00000624887 FUNDC1Q8IVP5 155 aa19.49■□□□□ 0.71
PCDHB11-202ENST00000624887 C7orf61Q8IZ16 206 aa19.49■□□□□ 0.71
PCDHB11-202ENST00000624887 OR56A4Q8NGH8 313 aa19.49■□□□□ 0.71
PCDHB11-202ENST00000624887 OR9I1Q8NGQ6 314 aa19.49■□□□□ 0.71
PCDHB11-202ENST00000624887 TUBGCP3Q96CW5 907 aa19.49■□□□□ 0.71
PCDHB11-202ENST00000624887 SCRN2Q96FV2 425 aa19.49■□□□□ 0.71
PCDHB11-202ENST00000624887 PLEKHG4BQ96PX9 1271 aa19.49■□□□□ 0.71
PCDHB11-202ENST00000624887 CPEB1Q9BZB8 566 aaKnown RBP19.49■□□□□ 0.71
PCDHB11-202ENST00000624887 ZNF225Q9UK10 706 aa19.49■□□□□ 0.71
PCDHB11-202ENST00000624887 ANKRD12Q6UB98 2062 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 NRP2O60462 931 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 LINC00032P0C843 101 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 UROSP10746 265 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 LBPP18428 481 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 UGT1A6P19224 532 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 UGT1A1P22309 533 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 UGT1A4P22310 534 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 PRDX3P30048 256 aaKnown RBP19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 UGT1A3P35503 534 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 UGT1A5P35504 534 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 GRB7Q14451 532 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 TEAD2Q15562 447 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 CHRNA6Q15825 494 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 ASTLQ6HA08 431 aaPredicted RBP19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 CRTC1Q6UUV9 634 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 SBSNQ6UWP8 590 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 TPRG1Q6ZUI0 275 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 RTL10Q7L3V2 364 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 EFL1Q7Z2Z2 1120 aaKnown RBP19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 TSPAN33Q86UF1 283 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 SP7Q8TDD2 431 aaPredicted RBP19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 C17orf80Q9BSJ5 609 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 CEP44Q9C0F1 390 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 SUV39H2Q9H5I1 410 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 CRLS1Q9UJA2 301 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 SLC25A13Q9UJS0 675 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 BTRCQ9Y297 605 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 CSPG5O95196 566 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 PTPN2P17706 415 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 IRX1P78414 480 aaPredicted RBP19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 MS4A2Q01362 244 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 KIF19Q2TAC6 998 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 HACD2Q6Y1H2 254 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 PCDH20Q8N6Y1 951 aaKnown RBP19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 SNX31Q8N9S9 440 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 MRPL40Q9NQ50 206 aaKnown RBP19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 TDP1Q9NUW8 608 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 GIMAP2Q9UG22 337 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 EIF2B4Q9UI10 523 aaKnown RBP19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 ADAMTS6Q9UKP5 1117 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 ASB1Q9Y576 335 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 TIMM22Q9Y584 194 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 PRSS21Q9Y6M0 314 aa19.48■□□□□ 0.71
PCDHB11-202ENST00000624887 AGAP14A8MT82 685 aa19.47■□□□□ 0.71
PCDHB11-202ENST00000624887 A8MX80 341 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms