RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 UGT1A1P22309 533 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 UGT1A4P22310 534 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 PTPN7P35236 360 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 UGT1A3P35503 534 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 TNNT3P45378 269 aaPredicted RBP16.92■□□□□ 0.3
HMGN3-203ENST00000620514 MAPK9P45984 424 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 RWDD2BP57060 319 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 EIF3EP60228 445 aaKnown RBP16.92■□□□□ 0.3
HMGN3-203ENST00000620514 OLIG2Q13516 323 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 TRA2AQ13595 282 aaKnown RBP eCLIP16.92■□□□□ 0.3
HMGN3-203ENST00000620514 PTPRCAPQ14761 206 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 KIR2DS5Q14953 304 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 CHRNA6Q15825 494 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 SEPT7Q16181 437 aaKnown RBP16.92■□□□□ 0.3
HMGN3-203ENST00000620514 INSCQ1MX18 579 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 SNAP47Q5SQN1 464 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 KIAA1614Q5VZ46 1190 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 FAM151BQ6UXP7 276 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 GLT6D1Q7Z4J2 308 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 KIAA1328Q86T90 577 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 GDAP1Q8TB36 358 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 DPYSL5Q9BPU6 564 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 APOL2Q9BQE5 337 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 TBC1D10AQ9BXI6 508 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 STN1Q9H668 368 aaKnown RBP16.92■□□□□ 0.3
HMGN3-203ENST00000620514 UGT1A7Q9HAW7 530 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 UGT1A10Q9HAW8 530 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 UGT1A8Q9HAW9 530 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 OCIAD1Q9NX40 245 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 HACD3Q9P035 362 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 CPNE7Q9UBL6 633 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 EFR3BQ9Y2G0 817 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 PRR19A6NJB7 356 aa16.91■□□□□ 0.3
HMGN3-203ENST00000620514 GAPDHSO14556 408 aaPredicted RBP16.91■□□□□ 0.3
HMGN3-203ENST00000620514 DUX1O43812 170 aa16.91■□□□□ 0.3
HMGN3-203ENST00000620514 VEGFDO43915 354 aa16.91■□□□□ 0.3
HMGN3-203ENST00000620514 C1QL1O75973 258 aa16.91■□□□□ 0.3
HMGN3-203ENST00000620514 RBP3P10745 1247 aa16.91■□□□□ 0.3
HMGN3-203ENST00000620514 SLC2A4P14672 509 aa16.91■□□□□ 0.3
HMGN3-203ENST00000620514 PSMB4P28070 264 aa16.91■□□□□ 0.3
HMGN3-203ENST00000620514 SPAM1P38567 509 aa16.91■□□□□ 0.3
HMGN3-203ENST00000620514 ARSDP51689 593 aa16.91■□□□□ 0.3
HMGN3-203ENST00000620514 GEMP55040 296 aa16.91■□□□□ 0.3
HMGN3-203ENST00000620514 UBE2IP63279 158 aaKnown RBP16.91■□□□□ 0.3
HMGN3-203ENST00000620514 RHDQ02161 417 aa16.91■□□□□ 0.3
HMGN3-203ENST00000620514 TMEM115Q12893 351 aaPredicted RBP16.91■□□□□ 0.3
HMGN3-203ENST00000620514 ANKRD20A2Q5SQ80 823 aa16.91■□□□□ 0.3
HMGN3-203ENST00000620514 ANKRD20A1Q5TYW2 823 aa16.91■□□□□ 0.3
HMGN3-203ENST00000620514 ANKRD20A3Q5VUR7 823 aa16.91■□□□□ 0.3
HMGN3-203ENST00000620514 DARS2Q6PI48 645 aaKnown RBP16.91■□□□□ 0.3
HMGN3-203ENST00000620514 C11orf96Q7Z7L8 435 aa16.91■□□□□ 0.3
HMGN3-203ENST00000620514 VASH2Q86V25 355 aa16.91■□□□□ 0.3
HMGN3-203ENST00000620514 CDKL3Q8IVW4 592 aaPredicted RBP16.91■□□□□ 0.3
HMGN3-203ENST00000620514 AGBL5Q8NDL9 886 aa16.91■□□□□ 0.3
HMGN3-203ENST00000620514 NCSTNQ92542 709 aa16.91■□□□□ 0.3
HMGN3-203ENST00000620514 SH3KBP1Q96B97 665 aa16.91■□□□□ 0.3
HMGN3-203ENST00000620514 TIMM29Q9BSF4 260 aa16.91■□□□□ 0.3
HMGN3-203ENST00000620514 DESI2Q9BSY9 194 aa16.91■□□□□ 0.3
HMGN3-203ENST00000620514 FSD1LQ9BXM9 530 aa16.91■□□□□ 0.3
HMGN3-203ENST00000620514 PDP2Q9P2J9 529 aa16.91■□□□□ 0.3
HMGN3-203ENST00000620514 PACSIN2Q9UNF0 486 aaPredicted RBP16.91■□□□□ 0.3
HMGN3-203ENST00000620514 FASNP49327 2511 aaKnown RBP16.9■□□□□ 0.3
HMGN3-203ENST00000620514 OR5K4A6NMS3 321 aa16.9■□□□□ 0.3
HMGN3-203ENST00000620514 A8MU76 341 aa16.9■□□□□ 0.3
HMGN3-203ENST00000620514 ERVH48-1M5A8F1 160 aa16.9■□□□□ 0.3
HMGN3-203ENST00000620514 KCNN4O15554 427 aa16.9■□□□□ 0.3
HMGN3-203ENST00000620514 BRAFP15056 766 aa16.9■□□□□ 0.3
HMGN3-203ENST00000620514 CSTF2P33240 577 aaKnown RBP eCLIP16.9■□□□□ 0.3
HMGN3-203ENST00000620514 SLC19A1P41440 591 aa16.9■□□□□ 0.3
HMGN3-203ENST00000620514 TAF1BQ53T94 588 aaPredicted RBP16.9■□□□□ 0.3
HMGN3-203ENST00000620514 ITPRIPL1Q6GPH6 555 aa16.9■□□□□ 0.3
HMGN3-203ENST00000620514 SPC24Q8NBT2 197 aa16.9■□□□□ 0.3
HMGN3-203ENST00000620514 CCDC110Q8TBZ0 833 aa16.9■□□□□ 0.3
HMGN3-203ENST00000620514 TTC9Q92623 222 aa16.9■□□□□ 0.3
HMGN3-203ENST00000620514 ART4Q93070 314 aa16.9■□□□□ 0.3
HMGN3-203ENST00000620514 TAAR9Q96RI9 348 aa16.9■□□□□ 0.3
HMGN3-203ENST00000620514 ZNF624Q9P2J8 865 aaPredicted RBP16.9■□□□□ 0.3
HMGN3-203ENST00000620514 KCTD3Q9Y597 815 aa16.9■□□□□ 0.3
HMGN3-203ENST00000620514 ARL5AQ9Y689 179 aa16.9■□□□□ 0.3
HMGN3-203ENST00000620514 GLYATL1P3A0A0U1RQE8 302 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 EFCAB7A8K855 629 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 PDZK1P1A8MUH7 402 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 TK2O00142 265 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 ANXA9O76027 345 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 FTCDO95954 541 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 XRCC1P18887 633 aaPredicted RBP16.89■□□□□ 0.29
HMGN3-203ENST00000620514 RPL10P27635 214 aaKnown RBP16.89■□□□□ 0.29
HMGN3-203ENST00000620514 ADRA1AP35348 466 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 CTSCP53634 463 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 EPHA4P54764 986 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 DRG2P55039 364 aaKnown RBP16.89■□□□□ 0.29
HMGN3-203ENST00000620514 TMEM164Q5U3C3 297 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 ZDHHC20Q5W0Z9 365 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 WDR74Q6RFH5 385 aaPredicted RBP16.89■□□□□ 0.29
HMGN3-203ENST00000620514 RANBP10Q6VN20 620 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 ARHGAP22Q7Z5H3 698 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 FAM129CQ86XR2 697 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 DTX1Q86Y01 620 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 TRAPPC5Q8IUR0 188 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 RASGEF1AQ8N9B8 481 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms