RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 H3BMM5 538 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 FPGTO14772 594 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 VEGFDO43915 354 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 AP2A2O94973 939 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 MPOP05164 745 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 PCCBP05166 539 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 RALBP11234 206 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 HNRNPA2B1P22626 353 aaKnown RBP7.93□□□□□ -1.14
CPNE3-209ENST00000620393 CRABP2P29373 138 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 TYK2P29597 1187 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 AVPR2P30518 371 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 AKT2P31751 481 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 IGFALSP35858 605 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 SKIV2L2P42285 1042 aaKnown RBP7.93□□□□□ -1.14
CPNE3-209ENST00000620393 MAGEA12P43365 314 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 FNTBP49356 437 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 CSRP3P50461 194 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 TAS2R39P59534 338 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 MAGOHP61326 146 aaKnown RBP7.93□□□□□ -1.14
CPNE3-209ENST00000620393 CDK3Q00526 305 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 TIAL1Q01085 375 aaKnown RBP eCLIP7.93□□□□□ -1.14
CPNE3-209ENST00000620393 CSTF1Q05048 431 aaKnown RBP7.93□□□□□ -1.14
CPNE3-209ENST00000620393 SLC18A2Q05940 514 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 IRF4Q15306 451 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 KHDC1Q4VXA5 237 aaKnown RBP7.93□□□□□ -1.14
CPNE3-209ENST00000620393 HSP90B2PQ58FF3 399 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 TTMPQ5BVD1 217 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 RBM20Q5T481 1227 aaKnown RBP7.93□□□□□ -1.14
CPNE3-209ENST00000620393 ZNF648Q5T619 568 aaPredicted RBP7.93□□□□□ -1.14
CPNE3-209ENST00000620393 KCTD16Q68DU8 428 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 PTRHD1Q6GMV3 140 aaKnown RBP7.93□□□□□ -1.14
CPNE3-209ENST00000620393 FAM45BPQ6NSW5 357 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 TSSK4Q6SA08 328 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 ADGRG6Q86SQ4 1221 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 WDR5BQ86VZ2 330 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 LONP2Q86WA8 852 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 HEATR4Q86WZ0 1026 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 PHYKPLQ8IUZ5 450 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 SLC41A1Q8IVJ1 513 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 CLDN19Q8N6F1 224 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 GPATCH11Q8N954 259 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 RASGEF1AQ8N9B8 481 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 FAM45AQ8TCE6 357 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 ACMSDQ8TDX5 336 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 BIRC7Q96CA5 298 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 SGF29Q96ES7 293 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 TSPAN17Q96FV3 270 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 ATXN7L3BQ96GX2 97 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 ELMO2Q96JJ3 720 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 SERAC1Q96JX3 654 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 SPACA7Q96KW9 195 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 NDNQ99608 321 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 ORAI3Q9BRQ5 295 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 APOOQ9BUR5 198 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 CCDC68Q9H2F9 335 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 LATS2Q9NRM7 1088 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 PHPT1Q9NRX4 125 aaPredicted RBP7.93□□□□□ -1.14
CPNE3-209ENST00000620393 FAM53CQ9NYF3 392 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 SENP1Q9P0U3 644 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 KLHL42Q9P2K6 505 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 GNPTGQ9UJJ9 305 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 FBXO4Q9UKT5 387 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.93□□□□□ -1.14
CPNE3-209ENST00000620393 ACTL7BQ9Y614 415 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 POM121BA6NF01 834 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 F8W8V4 182 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 QSOX1O00391 747 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 TOR1BO14657 336 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 SGTAO43765 313 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 MTX2O75431 263 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 RHOBTB1O94844 696 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 CDK14O94921 469 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 ALDOAP04075 364 aaKnown RBP7.92□□□□□ -1.14
CPNE3-209ENST00000620393 C2P06681 752 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 OR56A5P0C7T3 313 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 STMN1P16949 149 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 CHRM3P20309 590 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 SAT1P21673 171 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 FDXRP22570 491 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 CD27P26842 260 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 AKT1P31749 480 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 SERPINB8P50452 374 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 SLC12A2P55011 1212 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 CDKN2DP55273 166 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 CLDN2P57739 230 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 PFN3P60673 137 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 RAB10P61026 200 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 YPEL5P62699 121 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 RPL6Q02878 288 aaKnown RBP7.92□□□□□ -1.14
CPNE3-209ENST00000620393 ZKSCAN8Q15776 578 aaPredicted RBP7.92□□□□□ -1.14
CPNE3-209ENST00000620393 PPM1JQ5JR12 505 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 CTSL3PQ5NE16 218 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 UGT3A1Q6NUS8 523 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 TMEM220Q6QAJ8 160 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 CCDC91Q7Z6B0 441 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 C11orf74Q86VG3 221 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 CEP97Q8IW35 865 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 SRRM1Q8IYB3 904 aaKnown RBP7.92□□□□□ -1.14
CPNE3-209ENST00000620393 DEFB119Q8N690 84 aa7.92□□□□□ -1.14
CPNE3-209ENST00000620393 TMEM145Q8NBT3 493 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms