RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 GPR149Q86SP6 731 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 KDM1BQ8NB78 822 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 PTCD3Q96EY7 689 aaKnown RBP7.71□□□□□ -1.17
NEK3-207ENST00000617054 NSL1Q96IY1 281 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 SLC45A3Q96JT2 553 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 CLPTM1LQ96KA5 538 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 CDK15Q96Q40 435 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 ATOH8Q96SQ7 321 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 CCDC106Q9BWC9 280 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 P2RY12Q9H244 342 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 ZFP14Q9HCL3 533 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 SAR1AQ9NR31 198 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 IL36AQ9UHA7 158 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 FBXO10Q9UK96 956 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 RAP2CQ9Y3L5 183 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 NUMA1Q14980 2115 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 KIF26AQ9ULI4 1882 aaPredicted RBP7.71□□□□□ -1.18
NEK3-207ENST00000617054 OR2AG2A6NM03 316 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 CAPN14A8MX76 684 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 INPP4BO15327 924 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 ATP5BP06576 529 aaKnown RBP7.71□□□□□ -1.18
NEK3-207ENST00000617054 EEF1DP29692 281 aaKnown RBP7.71□□□□□ -1.18
NEK3-207ENST00000617054 MAPK8P45983 427 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 IL2P60568 153 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 ST8SIA6P61647 398 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 SULT2A1Q06520 285 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 ARHGEF7Q14155 803 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 KHDC1Q4VXA5 237 aaKnown RBP7.71□□□□□ -1.18
NEK3-207ENST00000617054 RALGPS1Q5JS13 557 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 SEL1L3Q68CR1 1132 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 SERPINA13PQ6UXR4 307 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 MBOAT1Q6ZNC8 495 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 RTL10Q7L3V2 364 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 CUZD1Q86UP6 607 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 LONP2Q86WA8 852 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 MMAAQ8IVH4 418 aaKnown RBP7.71□□□□□ -1.18
NEK3-207ENST00000617054 ETFBKMTQ8IXQ9 262 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 RDH11Q8TC12 318 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 CATSPER2Q96P56 530 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 TCF12Q99081 682 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 GDF15Q99988 308 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 CPEB1Q9BZB8 566 aaKnown RBP7.71□□□□□ -1.18
NEK3-207ENST00000617054 RASSF4Q9H2L5 321 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 GSTO2Q9H4Y5 243 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 ARHGEF3Q9NR81 526 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 TAS2R1Q9NYW7 299 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 MARK1Q9P0L2 795 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 ADAMTS6Q9UKP5 1117 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 PACSIN3Q9UKS6 424 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 TIMM22Q9Y584 194 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 GON4LQ3T8J9 2241 aa7.71□□□□□ -1.18
NEK3-207ENST00000617054 B2RBV5 119 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 TMEM114B3SHH9 223 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 SORBS2O94875 1100 aaKnown RBP7.7□□□□□ -1.18
NEK3-207ENST00000617054 ITGALP20701 1170 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 IMPDH1P20839 514 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 GDF5P43026 501 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 SUOXP51687 545 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 SEC13P55735 322 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 ZNF234Q14588 700 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 ACSBG2Q5FVE4 666 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 CYB5D1Q6P9G0 228 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 KIAA0907Q7Z7F0 614 aaPredicted RBP7.7□□□□□ -1.18
NEK3-207ENST00000617054 SKA2Q8WVK7 121 aaPredicted RBP7.7□□□□□ -1.18
NEK3-207ENST00000617054 DLG3Q92796 817 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 FOXJ1Q92949 421 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 OTUB2Q96DC9 234 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 MRPL38Q96DV4 380 aaKnown RBP7.7□□□□□ -1.18
NEK3-207ENST00000617054 HBEGFQ99075 208 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 TCF7L2Q9NQB0 619 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 TXLNGQ9NUQ3 528 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 CLDND1Q9NY35 253 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 CLEC1BQ9P126 229 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 BAIAP2L1Q9UHR4 511 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 HCN2Q9UL51 889 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 COMMD10Q9Y6G5 202 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 OAS3Q9Y6K5 1087 aaKnown RBP7.7□□□□□ -1.18
NEK3-207ENST00000617054 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.7□□□□□ -1.18
NEK3-207ENST00000617054 KNL1Q8NG31 2342 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 HDAC3O15379 428 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 RASSF9O75901 435 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 SERPINA6P08185 405 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 TPBGLP0DKB5 382 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 ZNF7P17097 686 aaPredicted RBP7.7□□□□□ -1.18
NEK3-207ENST00000617054 XPAP23025 273 aaPredicted RBP7.7□□□□□ -1.18
NEK3-207ENST00000617054 GDI1P31150 447 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 GJA4P35212 333 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 ARL1P40616 181 aaPredicted RBP7.7□□□□□ -1.18
NEK3-207ENST00000617054 SPINT3P49223 89 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 SLC25A3Q00325 362 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 HSPA14Q0VDF9 509 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 NUDT18Q6ZVK8 323 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 PARS2Q7L3T8 475 aaKnown RBP7.7□□□□□ -1.18
NEK3-207ENST00000617054 TRIM74Q86UV6 250 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 NXPE1Q8N323 547 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 STAG3L4Q8TBR4 150 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 TIFAQ96CG3 184 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 C3orf30Q96M34 536 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 RIOK2Q9BVS4 552 aaKnown RBP7.7□□□□□ -1.18
NEK3-207ENST00000617054 CADM1Q9BY67 442 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms