RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 LRRC57Q8N9N7 239 aa17.59■□□□□ 0.41
ATXN2-227ENST00000616825 SLC43A3Q8NBI5 491 aa17.59■□□□□ 0.41
ATXN2-227ENST00000616825 GATA5Q9BWX5 397 aaPredicted RBP17.59■□□□□ 0.41
ATXN2-227ENST00000616825 TMEM27Q9HBJ8 222 aa17.59■□□□□ 0.41
ATXN2-227ENST00000616825 CD48P09326 243 aa17.58■□□□□ 0.41
ATXN2-227ENST00000616825 CHIT1Q13231 466 aa17.58■□□□□ 0.41
ATXN2-227ENST00000616825 LARS2Q15031 903 aaKnown RBP17.58■□□□□ 0.41
ATXN2-227ENST00000616825 KCTD19Q17RG1 926 aaPredicted RBP17.58■□□□□ 0.41
ATXN2-227ENST00000616825 TMEM139Q8IV31 216 aa17.58■□□□□ 0.41
ATXN2-227ENST00000616825 SLC34A3Q8N130 599 aa17.58■□□□□ 0.41
ATXN2-227ENST00000616825 CRYBG2Q8N1P7 616 aa17.58■□□□□ 0.41
ATXN2-227ENST00000616825 SLC22A17Q8WUG5 538 aa17.58■□□□□ 0.41
ATXN2-227ENST00000616825 FZD8Q9H461 694 aa17.58■□□□□ 0.41
ATXN2-227ENST00000616825 CCDC177Q9NQR7 707 aaPredicted RBP17.58■□□□□ 0.41
ATXN2-227ENST00000616825 RWDD3Q9Y3V2 267 aa17.58■□□□□ 0.41
ATXN2-227ENST00000616825 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.58■□□□□ 0.4
ATXN2-227ENST00000616825 CCL22O00626 93 aa17.58■□□□□ 0.4
ATXN2-227ENST00000616825 ENPEPQ07075 957 aa17.58■□□□□ 0.4
ATXN2-227ENST00000616825 CNTD1Q8N815 330 aa17.58■□□□□ 0.4
ATXN2-227ENST00000616825 BRSK1Q8TDC3 778 aa17.58■□□□□ 0.4
ATXN2-227ENST00000616825 HERVK_113Q902F9 699 aa17.58■□□□□ 0.4
ATXN2-227ENST00000616825 POLE3Q9NRF9 147 aa17.58■□□□□ 0.4
ATXN2-227ENST00000616825 ELOVL7A1L3X0 281 aa17.58■□□□□ 0.4
ATXN2-227ENST00000616825 FAM92AA1XBS5 289 aa17.58■□□□□ 0.4
ATXN2-227ENST00000616825 LRRC72A6NJI9 287 aa17.58■□□□□ 0.4
ATXN2-227ENST00000616825 PEX10O60683 326 aa17.58■□□□□ 0.4
ATXN2-227ENST00000616825 KERAO60938 352 aa17.58■□□□□ 0.4
ATXN2-227ENST00000616825 CYP4B1P13584 511 aa17.58■□□□□ 0.4
ATXN2-227ENST00000616825 PTGER3P43115 390 aa17.58■□□□□ 0.4
ATXN2-227ENST00000616825 PERM1Q5SV97 790 aa17.58■□□□□ 0.4
ATXN2-227ENST00000616825 IFNLR1Q8IU57 520 aaPredicted RBP17.58■□□□□ 0.4
ATXN2-227ENST00000616825 FAM98AQ8NCA5 519 aaKnown RBP17.58■□□□□ 0.4
ATXN2-227ENST00000616825 RBM15BQ8NDT2 890 aaKnown RBP17.58■□□□□ 0.4
ATXN2-227ENST00000616825 COX4I2Q96KJ9 171 aa17.58■□□□□ 0.4
ATXN2-227ENST00000616825 SYT17Q9BSW7 474 aa17.58■□□□□ 0.4
ATXN2-227ENST00000616825 TMEM109Q9BVC6 243 aa17.58■□□□□ 0.4
ATXN2-227ENST00000616825 MKL2Q9ULH7 1088 aa17.58■□□□□ 0.4
ATXN2-227ENST00000616825 COQ4Q9Y3A0 265 aa17.58■□□□□ 0.4
ATXN2-227ENST00000616825 YJEFN3A6XGL0 299 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 LGR5O75473 907 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 SAGP10523 405 aaPredicted RBP17.57■□□□□ 0.4
ATXN2-227ENST00000616825 CCT3P49368 545 aaKnown RBP17.57■□□□□ 0.4
ATXN2-227ENST00000616825 RGS8P57771 180 aaPredicted RBP17.57■□□□□ 0.4
ATXN2-227ENST00000616825 DENND5AQ6IQ26 1287 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 FLCNQ8NFG4 579 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 SLC9A6Q92581 669 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 GPN3Q9UHW5 284 aaPredicted RBP17.57■□□□□ 0.4
ATXN2-227ENST00000616825 ZFP37Q9Y6Q3 630 aaPredicted RBP17.57■□□□□ 0.4
ATXN2-227ENST00000616825 IRGMA1A4Y4 181 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 MAPK12P53778 367 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 FASTKD3Q14CZ7 662 aaKnown RBP17.57■□□□□ 0.4
ATXN2-227ENST00000616825 FSTL4Q6MZW2 842 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 MED27Q6P2C8 311 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 OAFQ86UD1 273 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 TMC8Q8IU68 726 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 PSMA8Q8TAA3 256 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 VANGL1Q8TAA9 524 aaPredicted RBP17.57■□□□□ 0.4
ATXN2-227ENST00000616825 PSMG2Q969U7 264 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 C1GALT1C1Q96EU7 318 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 WRAP53Q9BUR4 548 aaKnown RBP17.57■□□□□ 0.4
ATXN2-227ENST00000616825 DPEP3Q9H4B8 488 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 C8AP07357 584 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 CDH3P22223 829 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 CAP1Q01518 475 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 MINDY4Q4G0A6 757 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 ARHGAP22Q7Z5H3 698 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 RALGPS2Q86X27 583 aaPredicted RBP17.57■□□□□ 0.4
ATXN2-227ENST00000616825 PNPT1Q8TCS8 783 aaKnown RBP17.57■□□□□ 0.4
ATXN2-227ENST00000616825 HMCESQ96FZ2 354 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 PLEKHG4BQ96PX9 1271 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 UBAP1Q9NZ09 502 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 FBXW11Q9UKB1 542 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 SLC26A3P40879 764 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 PLA2G4EQ3MJ16 856 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 MTX3Q5HYI7 312 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 ANKRD22Q5VYY1 191 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 KLHL24Q6TFL4 600 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 ZNF730Q6ZMV8 503 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 FAM92BQ6ZTR7 304 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 SERPINA9Q86WD7 417 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.57■□□□□ 0.4
ATXN2-227ENST00000616825 FAM13CQ8NE31 585 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 PCDH19Q8TAB3 1148 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 LPGAT1Q92604 370 aa17.57■□□□□ 0.4
ATXN2-227ENST00000616825 DUS2Q9NX74 493 aaKnown RBP17.57■□□□□ 0.4
ATXN2-227ENST00000616825 NOCTQ9UK39 431 aaKnown RBP17.57■□□□□ 0.4
ATXN2-227ENST00000616825 ZNF214Q9UL59 606 aaPredicted RBP17.57■□□□□ 0.4
ATXN2-227ENST00000616825 TM7SF2O76062 418 aa17.56■□□□□ 0.4
ATXN2-227ENST00000616825 UROSP10746 265 aa17.56■□□□□ 0.4
ATXN2-227ENST00000616825 NT5EP21589 574 aa17.56■□□□□ 0.4
ATXN2-227ENST00000616825 CMPK1P30085 196 aa17.56■□□□□ 0.4
ATXN2-227ENST00000616825 JAM2P57087 298 aa17.56■□□□□ 0.4
ATXN2-227ENST00000616825 TAS2R39P59534 338 aa17.56■□□□□ 0.4
ATXN2-227ENST00000616825 RALGDSQ12967 914 aa17.56■□□□□ 0.4
ATXN2-227ENST00000616825 LAPTM5Q13571 262 aa17.56■□□□□ 0.4
ATXN2-227ENST00000616825 PTGES3Q15185 160 aaKnown RBP17.56■□□□□ 0.4
ATXN2-227ENST00000616825 VPS26BQ4G0F5 336 aa17.56■□□□□ 0.4
ATXN2-227ENST00000616825 ZYG11AQ6WRX3 759 aa17.56■□□□□ 0.4
ATXN2-227ENST00000616825 TAF8Q7Z7C8 310 aa17.56■□□□□ 0.4
ATXN2-227ENST00000616825 HPS6Q86YV9 775 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms