RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 DLGAP3O95886 979 aa17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 FUCA1P04066 466 aa17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 CDKN2BP42772 138 aa17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 VSNL1P62760 191 aa17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 C1QL3Q5VWW1 255 aa17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 EMBQ6PCB8 327 aa17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 MFSD7Q6UXD7 560 aa17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 CYP4V2Q6ZWL3 525 aaPredicted RBP17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 GSTA5Q7RTV2 222 aa17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 HDXQ7Z353 690 aa17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 TMEM135Q86UB9 458 aa17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 ZNF354CQ86Y25 554 aa17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 CPNE8Q86YQ8 564 aa17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 PRELID2Q8N945 189 aa17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 HCAR2Q8TDS4 363 aa17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 HAUS1Q96CS2 278 aa17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 ZPBPQ9BS86 351 aa17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 SNRNP25Q9BV90 132 aaKnown RBP17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 HEMGNQ9BXL5 484 aa17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 SUV39H2Q9H5I1 410 aa17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 TMEM248Q9NWD8 314 aa17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 RCOR3Q9P2K3 495 aaPredicted RBP17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 LHX3Q9UBR4 397 aa17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 AP4E1Q9UPM8 1137 aa17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 POLHQ9Y253 713 aa17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 ST14Q9Y5Y6 855 aa17.46■□□□□ 0.38
TRAPPC3-209ENST00000616395 OTOGQ6ZRI0 2925 aa17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 CSMD1Q96PZ7 3565 aa17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 ZSCAN5CA6NGD5 496 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 TNNT3P45378 269 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 PMS2P54278 862 aa17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 SLC7A5Q01650 507 aa17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 RALGDSQ12967 914 aa17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 CALCOCO2Q13137 446 aa17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 MRPL49Q13405 166 aaKnown RBP17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 SMTNL2Q2TAL5 461 aa17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 INO80DQ53TQ3 878 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 AADACL2Q6P093 401 aa17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 DRICH1Q6PGQ1 229 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 CEP128Q6ZU80 1094 aa17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 BBS12Q6ZW61 710 aa17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 ZNF761Q86XN6 746 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 CCDC89Q8N998 374 aa17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 CASKIN2Q8WXE0 1202 aa17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 IFT81Q8WYA0 676 aa17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 SLCO2A1Q92959 643 aa17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 ERP44Q9BS26 406 aa17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 ZNF670Q9BS34 389 aa17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 KLC2Q9H0B6 622 aa17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 TSPYL1Q9H0U9 437 aa17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 DHX35Q9H5Z1 703 aaKnown RBP17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 FBXO8Q9NRD0 319 aa17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 OAS3Q9Y6K5 1087 aaKnown RBP17.45■□□□□ 0.38
TRAPPC3-209ENST00000616395 ARHGEF17Q96PE2 2063 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 TCP11X1B4DZS4 312 aa17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 H3BRJ5 948 aa17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 EPHB2P29323 1055 aa17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 DLSTP36957 453 aa17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 GNPDA1P46926 289 aa17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 PPM1FP49593 454 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 DRG2P55039 364 aaKnown RBP17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 GPLD1P80108 840 aa17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 KLF1Q13351 362 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 NADK2Q4G0N4 442 aa17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 CFAP58Q5T655 872 aa17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 PNCKQ6P2M8 343 aa17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 ARHGAP22Q7Z5H3 698 aa17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 ESX1Q8N693 406 aa17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 PRR7Q8TB68 274 aa17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 PTCD2Q8WV60 388 aaKnown RBP17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 RAPGEF5Q92565 580 aa17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 RNF31Q96EP0 1072 aa17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 AHCYL2Q96HN2 611 aaKnown RBP17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 PKNOX2Q96KN3 472 aa17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 KCTD15Q96SI1 283 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 NOL6Q9H6R4 1146 aaKnown RBP17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 TRNAU1APQ9NX07 287 aaKnown RBP17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 MTRF1LQ9UGC7 380 aaKnown RBP17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 DMGDHQ9UI17 866 aaKnown RBP17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 ZNF148Q9UQR1 794 aa17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 DRG1Q9Y295 367 aaKnown RBP17.44■□□□□ 0.38
TRAPPC3-209ENST00000616395 MED13Q9UHV7 2174 aa17.43■□□□□ 0.38
TRAPPC3-209ENST00000616395 CFAP69A5D8W1 941 aa17.43■□□□□ 0.38
TRAPPC3-209ENST00000616395 WIPF3A6NGB9 483 aa17.43■□□□□ 0.38
TRAPPC3-209ENST00000616395 APOL1O14791 398 aa17.43■□□□□ 0.38
TRAPPC3-209ENST00000616395 TTI1O43156 1089 aa17.43■□□□□ 0.38
TRAPPC3-209ENST00000616395 DNAJB5O75953 348 aa17.43■□□□□ 0.38
TRAPPC3-209ENST00000616395 CEACAM5P06731 702 aa17.43■□□□□ 0.38
TRAPPC3-209ENST00000616395 MYCLP1P12525 358 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC3-209ENST00000616395 GM2AP17900 193 aa17.43■□□□□ 0.38
TRAPPC3-209ENST00000616395 TPI1P60174 286 aa17.43■□□□□ 0.38
TRAPPC3-209ENST00000616395 CAV1Q03135 178 aa17.43■□□□□ 0.38
TRAPPC3-209ENST00000616395 CYTH1Q15438 398 aa17.43■□□□□ 0.38
TRAPPC3-209ENST00000616395 ATP13A4Q4VNC1 1196 aa17.43■□□□□ 0.38
TRAPPC3-209ENST00000616395 PRR30Q53SZ7 412 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC3-209ENST00000616395 BRAT1Q6PJG6 821 aa17.43■□□□□ 0.38
TRAPPC3-209ENST00000616395 LIPIQ6XZB0 460 aa17.43■□□□□ 0.38
TRAPPC3-209ENST00000616395 CAMK1DQ8IU85 385 aa17.43■□□□□ 0.38
TRAPPC3-209ENST00000616395 P3H4Q92791 437 aa17.43■□□□□ 0.38
TRAPPC3-209ENST00000616395 LRRC45Q96CN5 670 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms