RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 SPATS2LQ9NUQ6 558 aaKnown RBP16.4■□□□□ 0.22
IRF1-211ENST00000613424 TAAR2Q9P1P5 351 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 SLC23A2Q9UGH3 650 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 ANAPC5Q9UJX4 755 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 GPR34Q9UPC5 381 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 LY6G6EA0A0G2JKS1 128 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 KMOO15229 486 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 TP73O15350 636 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 ACP5P13686 325 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 CKMT2P17540 419 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 ACRV1P26436 265 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 AKT1P31749 480 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 ACTR1BP42025 376 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 CTSCP53634 463 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 ACTR1AP61163 376 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 B4GALNT1Q00973 533 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 ARMC3Q5W041 872 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 DUPD1Q68J44 220 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 OGFOD3Q6PK18 319 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 SLC30A9Q6PML9 568 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 AFTPHQ6ULP2 937 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 PNPLA1Q8N8W4 532 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 HEXDCQ8WVB3 486 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 SGF29Q96ES7 293 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 CCDC97Q96F63 343 aaPredicted RBP16.39■□□□□ 0.21
IRF1-211ENST00000613424 SGSM3Q96HU1 749 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 COPS8Q99627 209 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 DPEP2Q9H4A9 486 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 TOR4AQ9NXH8 423 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 ZDHHC3Q9NYG2 299 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 SAMD15Q9P1V8 674 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 GULP1Q9UBP9 304 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 U3KQA8 63 aa16.39■□□□□ 0.21
IRF1-211ENST00000613424 SPEGQ15772 3267 aa16.38■□□□□ 0.21
IRF1-211ENST00000613424 FAM237BA0A1B0GVD1 139 aa16.38■□□□□ 0.21
IRF1-211ENST00000613424 OR2AG2A6NM03 316 aa16.38■□□□□ 0.21
IRF1-211ENST00000613424 SMAPO00193 183 aa16.38■□□□□ 0.21
IRF1-211ENST00000613424 CKMT1AP12532 417 aa16.38■□□□□ 0.21
IRF1-211ENST00000613424 ZNF7P17097 686 aaPredicted RBP16.38■□□□□ 0.21
IRF1-211ENST00000613424 DAB2P98082 770 aa16.38■□□□□ 0.21
IRF1-211ENST00000613424 DBN1Q16643 649 aa16.38■□□□□ 0.21
IRF1-211ENST00000613424 MSS51Q4VC12 460 aa16.38■□□□□ 0.21
IRF1-211ENST00000613424 FASTKD1Q53R41 847 aaKnown RBP16.38■□□□□ 0.21
IRF1-211ENST00000613424 DET1Q7L5Y6 550 aa16.38■□□□□ 0.21
IRF1-211ENST00000613424 C11orf96Q7Z7L8 435 aa16.38■□□□□ 0.21
IRF1-211ENST00000613424 SLCO6A1Q86UG4 719 aa16.38■□□□□ 0.21
IRF1-211ENST00000613424 TRAPPC5Q8IUR0 188 aa16.38■□□□□ 0.21
IRF1-211ENST00000613424 SFTPA2Q8IWL1 248 aa16.38■□□□□ 0.21
IRF1-211ENST00000613424 SLC35F3Q8IY50 421 aa16.38■□□□□ 0.21
IRF1-211ENST00000613424 NAT14Q8WUY8 206 aa16.38■□□□□ 0.21
IRF1-211ENST00000613424 GLMNQ92990 594 aa16.38■□□□□ 0.21
IRF1-211ENST00000613424 DCUN1D1Q96GG9 259 aa16.38■□□□□ 0.21
IRF1-211ENST00000613424 PWWP2AQ96N64 755 aa16.38■□□□□ 0.21
IRF1-211ENST00000613424 FCRL3Q96P31 734 aaPredicted RBP16.38■□□□□ 0.21
IRF1-211ENST00000613424 TRIM56Q9BRZ2 755 aaKnown RBP16.38■□□□□ 0.21
IRF1-211ENST00000613424 DPH5Q9H2P9 285 aa16.38■□□□□ 0.21
IRF1-211ENST00000613424 KLC4Q9NSK0 619 aa16.38■□□□□ 0.21
IRF1-211ENST00000613424 SIRPGQ9P1W8 387 aa16.38■□□□□ 0.21
IRF1-211ENST00000613424 KCNK6Q9Y257 313 aa16.38■□□□□ 0.21
IRF1-211ENST00000613424 IGLV3-16A0A075B6K0 115 aa16.37■□□□□ 0.21
IRF1-211ENST00000613424 POP7O75817 140 aaKnown RBP16.37■□□□□ 0.21
IRF1-211ENST00000613424 VAPBO95292 243 aa16.37■□□□□ 0.21
IRF1-211ENST00000613424 FTH1P19P0C7X4 201 aa16.37■□□□□ 0.21
IRF1-211ENST00000613424 RALBP11234 206 aa16.37■□□□□ 0.21
IRF1-211ENST00000613424 ATP1B2P14415 290 aaPredicted RBP16.37■□□□□ 0.21
IRF1-211ENST00000613424 ACP1P24666 158 aa16.37■□□□□ 0.21
IRF1-211ENST00000613424 DHX9Q08211 1270 aaKnown RBP16.37■□□□□ 0.21
IRF1-211ENST00000613424 NR0B2Q15466 257 aa16.37■□□□□ 0.21
IRF1-211ENST00000613424 INSCQ1MX18 579 aa16.37■□□□□ 0.21
IRF1-211ENST00000613424 PLA2G4EQ3MJ16 856 aa16.37■□□□□ 0.21
IRF1-211ENST00000613424 ANKRD20A4Q4UJ75 823 aa16.37■□□□□ 0.21
IRF1-211ENST00000613424 N4BP2L1Q5TBK1 243 aaPredicted RBP16.37■□□□□ 0.21
IRF1-211ENST00000613424 TMEM135Q86UB9 458 aa16.37■□□□□ 0.21
IRF1-211ENST00000613424 ARL10Q8N8L6 244 aa16.37■□□□□ 0.21
IRF1-211ENST00000613424 BBOF1Q8ND07 529 aa16.37■□□□□ 0.21
IRF1-211ENST00000613424 MNS1Q8NEH6 495 aa16.37■□□□□ 0.21
IRF1-211ENST00000613424 GPR156Q8NFN8 814 aa16.37■□□□□ 0.21
IRF1-211ENST00000613424 ZDHHC1Q8WTX9 485 aa16.37■□□□□ 0.21
IRF1-211ENST00000613424 ZNF514Q96K75 400 aaPredicted RBP16.37■□□□□ 0.21
IRF1-211ENST00000613424 TIMM29Q9BSF4 260 aa16.37■□□□□ 0.21
IRF1-211ENST00000613424 LRRC1Q9BTT6 524 aa16.37■□□□□ 0.21
IRF1-211ENST00000613424 CATSPERZQ9NTU4 200 aa16.37■□□□□ 0.21
IRF1-211ENST00000613424 NCKIPSDQ9NZQ3 722 aa16.37■□□□□ 0.21
IRF1-211ENST00000613424 WHRNQ9P202 907 aa16.37■□□□□ 0.21
IRF1-211ENST00000613424 UTP11Q9Y3A2 253 aaKnown RBP16.37■□□□□ 0.21
IRF1-211ENST00000613424 MAD1L1Q9Y6D9 718 aa16.37■□□□□ 0.21
IRF1-211ENST00000613424 DNMT3AQ9Y6K1 912 aaPredicted RBP16.37■□□□□ 0.21
IRF1-211ENST00000613424 ARHGEF17Q96PE2 2063 aaPredicted RBP16.37■□□□□ 0.21
IRF1-211ENST00000613424 GOLGA4Q13439 2230 aaKnown RBP16.36■□□□□ 0.21
IRF1-211ENST00000613424 CTAGE15A4D2H0 777 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 B4DGG1 531 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 CFAP99D6REC4 459 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 NDC80O14777 642 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 CD3EAPO15446 510 aaKnown RBP16.36■□□□□ 0.21
IRF1-211ENST00000613424 SGTAO43765 313 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 NOBOXO60393 691 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 BANF1O75531 89 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 CTAGE8P0CG41 777 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 ARNTP27540 789 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 ARCN1P48444 511 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms