RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 MTX2O75431 263 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 VCLP18206 1134 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 XRCC1P18887 633 aaPredicted RBP17.11■□□□□ 0.33
PRKN-209ENST00000612485 CTNNA1P35221 906 aaKnown RBP17.11■□□□□ 0.33
PRKN-209ENST00000612485 SPAM1P38567 509 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 MAPK9P45984 424 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 ATP5OP48047 213 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 ATP1A2P50993 1020 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 ZNF75DP51815 510 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 NAP1L1P55209 391 aaKnown RBP17.11■□□□□ 0.33
PRKN-209ENST00000612485 UBE2IP63279 158 aaKnown RBP17.11■□□□□ 0.33
PRKN-209ENST00000612485 NOMO1Q15155 1222 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 SLC1A5Q15758 541 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 ATP13A5Q4VNC0 1218 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 SNAP47Q5SQN1 464 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 DCAF12Q5T6F0 453 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 GLT6D1Q7Z4J2 308 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 TRIM48Q8IWZ4 208 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 TTC30BQ8N4P2 665 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 IPMKQ8NFU5 416 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 GDAP1Q8TB36 358 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 ART4Q93070 314 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 OXNAD1Q96HP4 312 aaPredicted RBP17.11■□□□□ 0.33
PRKN-209ENST00000612485 FSD1LQ9BXM9 530 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 UCK1Q9HA47 277 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 OCIAD1Q9NX40 245 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 SLC23A2Q9UGH3 650 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 EFR3BQ9Y2G0 817 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 DNAJC16Q9Y2G8 782 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 PCDHA3Q9Y5H8 950 aa17.11■□□□□ 0.33
PRKN-209ENST00000612485 SOWAHDA6NJG2 315 aa17.1■□□□□ 0.33
PRKN-209ENST00000612485 PDZK1P1A8MUH7 402 aa17.1■□□□□ 0.33
PRKN-209ENST00000612485 F5H423 210 aaPredicted RBP17.1■□□□□ 0.33
PRKN-209ENST00000612485 VIPP01282 170 aa17.1■□□□□ 0.33
PRKN-209ENST00000612485 CHRNA4P43681 627 aa17.1■□□□□ 0.33
PRKN-209ENST00000612485 TMEM115Q12893 351 aaPredicted RBP17.1■□□□□ 0.33
PRKN-209ENST00000612485 SRSF6Q13247 344 aaKnown RBP17.1■□□□□ 0.33
PRKN-209ENST00000612485 ITPRIPL1Q6GPH6 555 aa17.1■□□□□ 0.33
PRKN-209ENST00000612485 ARHGAP22Q7Z5H3 698 aa17.1■□□□□ 0.33
PRKN-209ENST00000612485 VASH2Q86V25 355 aa17.1■□□□□ 0.33
PRKN-209ENST00000612485 BLOC1S5Q8TDH9 187 aa17.1■□□□□ 0.33
PRKN-209ENST00000612485 TTC25Q96NG3 672 aa17.1■□□□□ 0.33
PRKN-209ENST00000612485 TEFMQ96QE5 360 aaKnown RBP17.1■□□□□ 0.33
PRKN-209ENST00000612485 TBC1D10AQ9BXI6 508 aa17.1■□□□□ 0.33
PRKN-209ENST00000612485 ZCCHC2Q9C0B9 1178 aaKnown RBP17.1■□□□□ 0.33
PRKN-209ENST00000612485 IL26Q9NPH9 171 aa17.1■□□□□ 0.33
PRKN-209ENST00000612485 IL17CQ9P0M4 197 aa17.1■□□□□ 0.33
PRKN-209ENST00000612485 TMPRSS11EQ9UL52 423 aa17.1■□□□□ 0.33
PRKN-209ENST00000612485 PKP3Q9Y446 797 aa17.1■□□□□ 0.33
PRKN-209ENST00000612485 B3GALT1Q9Y5Z6 326 aa17.1■□□□□ 0.33
PRKN-209ENST00000612485 CCDC66A2RUB6 948 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 A8MU76 341 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 BTNL10A8MVZ5 291 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 KCNJ13O60928 360 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 PPFIA2O75334 1257 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 ANXA9O76027 345 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 IDSP22304 550 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 FECHP22830 423 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 CTNNA2P26232 953 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 RBL1P28749 1068 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 CETN2P41208 172 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 GEMP55040 296 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 ITGA9Q13797 1035 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 LY6DQ14210 128 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 SEPT7Q16181 437 aaKnown RBP17.09■□□□□ 0.33
PRKN-209ENST00000612485 KHDC1Q4VXA5 237 aaKnown RBP17.09■□□□□ 0.33
PRKN-209ENST00000612485 WASH2PQ6VEQ5 465 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 TMEM26Q6ZUK4 368 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 ZNF605Q86T29 641 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 PLXDC1Q8IUK5 500 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 TRAPPC5Q8IUR0 188 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 ZNF547Q8IVP9 402 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 CDKL3Q8IVW4 592 aaPredicted RBP17.09■□□□□ 0.33
PRKN-209ENST00000612485 PMEPA1Q969W9 287 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 MED8Q96G25 268 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 OSBPL8Q9BZF1 889 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 GBA3Q9H227 469 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 WASH6PQ9NQA3 447 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 POT1Q9NUX5 634 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 SCHIP1Q9P0W5 487 aaPredicted RBP17.09■□□□□ 0.33
PRKN-209ENST00000612485 PCDHGA4Q9Y5G9 962 aa17.09■□□□□ 0.33
PRKN-209ENST00000612485 GLYATL1P3A0A0U1RQE8 302 aa17.08■□□□□ 0.32
PRKN-209ENST00000612485 MACROD2A1Z1Q3 448 aa17.08■□□□□ 0.32
PRKN-209ENST00000612485 RCCD1A6NED2 376 aa17.08■□□□□ 0.32
PRKN-209ENST00000612485 PRR19A6NJB7 356 aa17.08■□□□□ 0.32
PRKN-209ENST00000612485 STK10O94804 968 aaKnown RBP17.08■□□□□ 0.32
PRKN-209ENST00000612485 ITGB2P05107 769 aa17.08■□□□□ 0.32
PRKN-209ENST00000612485 PTPN7P35236 360 aa17.08■□□□□ 0.32
PRKN-209ENST00000612485 SLC19A1P41440 591 aa17.08■□□□□ 0.32
PRKN-209ENST00000612485 ARSDP51689 593 aa17.08■□□□□ 0.32
PRKN-209ENST00000612485 RWDD2BP57060 319 aa17.08■□□□□ 0.32
PRKN-209ENST00000612485 MC2RQ01718 297 aa17.08■□□□□ 0.32
PRKN-209ENST00000612485 OTUD4Q01804 1114 aaKnown RBP17.08■□□□□ 0.32
PRKN-209ENST00000612485 CHRNA6Q15825 494 aa17.08■□□□□ 0.32
PRKN-209ENST00000612485 LDLRAP1Q5SW96 308 aa17.08■□□□□ 0.32
PRKN-209ENST00000612485 AGAP9Q5VTM2 703 aa17.08■□□□□ 0.32
PRKN-209ENST00000612485 ABRAXAS1Q6UWZ7 409 aa17.08■□□□□ 0.32
PRKN-209ENST00000612485 XKR5Q6UX68 686 aa17.08■□□□□ 0.32
PRKN-209ENST00000612485 FAM151BQ6UXP7 276 aa17.08■□□□□ 0.32
PRKN-209ENST00000612485 CEACAM20Q6UY09 585 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms