RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 GDAP1Q8TB36 358 aa17.96■□□□□ 0.47
VCX3A-203ENST00000612369 LRRC45Q96CN5 670 aa17.96■□□□□ 0.47
VCX3A-203ENST00000612369 CCDC74BQ96LY2 380 aa17.96■□□□□ 0.47
VCX3A-203ENST00000612369 SPATA13Q96N96 652 aa17.96■□□□□ 0.47
VCX3A-203ENST00000612369 TTC25Q96NG3 672 aa17.96■□□□□ 0.47
VCX3A-203ENST00000612369 ZCCHC2Q9C0B9 1178 aaKnown RBP17.96■□□□□ 0.47
VCX3A-203ENST00000612369 C10orf88Q9H8K7 445 aa17.96■□□□□ 0.47
VCX3A-203ENST00000612369 PDP2Q9P2J9 529 aa17.96■□□□□ 0.47
VCX3A-203ENST00000612369 TMPRSS11EQ9UL52 423 aa17.96■□□□□ 0.47
VCX3A-203ENST00000612369 GLYATL1P3A0A0U1RQE8 302 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 C5orf60A6NFR6 353 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 C2orf81A6NN90 581 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 TK2O00142 265 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 AGTP01019 485 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 THRAP10827 490 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 HOXB3P14651 431 aaPredicted RBP17.95■□□□□ 0.46
VCX3A-203ENST00000612369 VCLP18206 1134 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 ADRA1AP35348 466 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 VAC14Q08AM6 782 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 CLN3Q13286 438 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 LDLRAP1Q5SW96 308 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 AADACL2Q6P093 401 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 WDR74Q6RFH5 385 aaPredicted RBP17.95■□□□□ 0.46
VCX3A-203ENST00000612369 CRTC3Q6UUV7 619 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 WASH2PQ6VEQ5 465 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 RNF10Q8N5U6 811 aaKnown RBP17.95■□□□□ 0.46
VCX3A-203ENST00000612369 SPC24Q8NBT2 197 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 AGBL5Q8NDL9 886 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 CCDC112Q8NEF3 446 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 GORASP1Q9BQQ3 440 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 FICDQ9BVA6 458 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 OSGEPL1Q9H4B0 414 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 UCK1Q9HA47 277 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 WASH6PQ9NQA3 447 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 PRDM8Q9NQV8 689 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 CPNE7Q9UBL6 633 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 SLC23A2Q9UGH3 650 aa17.95■□□□□ 0.46
VCX3A-203ENST00000612369 PRR19A6NJB7 356 aa17.94■□□□□ 0.46
VCX3A-203ENST00000612369 EIF4E1BA6NMX2 242 aaKnown RBP17.94■□□□□ 0.46
VCX3A-203ENST00000612369 STX7O15400 261 aaKnown RBP17.94■□□□□ 0.46
VCX3A-203ENST00000612369 MTX2O75431 263 aa17.94■□□□□ 0.46
VCX3A-203ENST00000612369 LIPCP11150 499 aa17.94■□□□□ 0.46
VCX3A-203ENST00000612369 LPOP22079 712 aaPredicted RBP17.94■□□□□ 0.46
VCX3A-203ENST00000612369 IDSP22304 550 aa17.94■□□□□ 0.46
VCX3A-203ENST00000612369 PSMB4P28070 264 aa17.94■□□□□ 0.46
VCX3A-203ENST00000612369 CSF2RBP32927 897 aa17.94■□□□□ 0.46
VCX3A-203ENST00000612369 CSTF2P33240 577 aaKnown RBP eCLIP17.94■□□□□ 0.46
VCX3A-203ENST00000612369 MAPK10P53779 464 aa17.94■□□□□ 0.46
VCX3A-203ENST00000612369 PDE1BQ01064 536 aa17.94■□□□□ 0.46
VCX3A-203ENST00000612369 CFHR1Q03591 330 aa17.94■□□□□ 0.46
VCX3A-203ENST00000612369 NFATC2Q13469 925 aa17.94■□□□□ 0.46
VCX3A-203ENST00000612369 TAF1AQ15573 450 aaPredicted RBP17.94■□□□□ 0.46
VCX3A-203ENST00000612369 CHRNA6Q15825 494 aa17.94■□□□□ 0.46
VCX3A-203ENST00000612369 KHDC1Q4VXA5 237 aaKnown RBP17.94■□□□□ 0.46
VCX3A-203ENST00000612369 ABRAXAS1Q6UWZ7 409 aa17.94■□□□□ 0.46
VCX3A-203ENST00000612369 ZNF547Q8IVP9 402 aa17.94■□□□□ 0.46
VCX3A-203ENST00000612369 RCBTB1Q8NDN9 531 aa17.94■□□□□ 0.46
VCX3A-203ENST00000612369 DDHD1Q8NEL9 900 aa17.94■□□□□ 0.46
VCX3A-203ENST00000612369 USP7Q93009 1102 aa17.94■□□□□ 0.46
VCX3A-203ENST00000612369 BBC3Q96PG8 261 aaPredicted RBP17.94■□□□□ 0.46
VCX3A-203ENST00000612369 C19orf43Q9BQ61 176 aa17.94■□□□□ 0.46
VCX3A-203ENST00000612369 DESI2Q9BSY9 194 aa17.94■□□□□ 0.46
VCX3A-203ENST00000612369 ZMYND15Q9H091 742 aa17.94■□□□□ 0.46
VCX3A-203ENST00000612369 CPNE5Q9HCH3 593 aa17.94■□□□□ 0.46
VCX3A-203ENST00000612369 SMOXQ9NWM0 555 aa17.94■□□□□ 0.46
VCX3A-203ENST00000612369 FEZ2Q9UHY8 353 aaPredicted RBP17.94■□□□□ 0.46
VCX3A-203ENST00000612369 DNMT3AQ9Y6K1 912 aaPredicted RBP17.94■□□□□ 0.46
VCX3A-203ENST00000612369 PRAMEF33A0A0G2JMD5 474 aa17.93■□□□□ 0.46
VCX3A-203ENST00000612369 LILRA5A6NI73 299 aa17.93■□□□□ 0.46
VCX3A-203ENST00000612369 ATXN7O15265 892 aaPredicted RBP17.93■□□□□ 0.46
VCX3A-203ENST00000612369 DDX3YO15523 660 aaKnown RBP17.93■□□□□ 0.46
VCX3A-203ENST00000612369 PRAMEF10O60809 474 aa17.93■□□□□ 0.46
VCX3A-203ENST00000612369 VIPP01282 170 aa17.93■□□□□ 0.46
VCX3A-203ENST00000612369 ETV5P41161 510 aa17.93■□□□□ 0.46
VCX3A-203ENST00000612369 PPM1FP49593 454 aaPredicted RBP17.93■□□□□ 0.46
VCX3A-203ENST00000612369 UBE2IP63279 158 aaKnown RBP17.93■□□□□ 0.46
VCX3A-203ENST00000612369 RHDQ02161 417 aa17.93■□□□□ 0.46
VCX3A-203ENST00000612369 AGAP9Q5VTM2 703 aa17.93■□□□□ 0.46
VCX3A-203ENST00000612369 FAM151BQ6UXP7 276 aa17.93■□□□□ 0.46
VCX3A-203ENST00000612369 CCDC81Q6ZN84 652 aa17.93■□□□□ 0.46
VCX3A-203ENST00000612369 C11orf96Q7Z7L8 435 aa17.93■□□□□ 0.46
VCX3A-203ENST00000612369 ZNF761Q86XN6 746 aaPredicted RBP17.93■□□□□ 0.46
VCX3A-203ENST00000612369 TRAPPC5Q8IUR0 188 aa17.93■□□□□ 0.46
VCX3A-203ENST00000612369 RBM12BQ8IXT5 1001 aaKnown RBP17.93■□□□□ 0.46
VCX3A-203ENST00000612369 KLHDC8BQ8IXV7 354 aa17.93■□□□□ 0.46
VCX3A-203ENST00000612369 CCDC110Q8TBZ0 833 aa17.93■□□□□ 0.46
VCX3A-203ENST00000612369 HES6Q96HZ4 224 aa17.93■□□□□ 0.46
VCX3A-203ENST00000612369 TAAR9Q96RI9 348 aa17.93■□□□□ 0.46
VCX3A-203ENST00000612369 CCNL2Q96S94 520 aaPredicted RBP17.93■□□□□ 0.46
VCX3A-203ENST00000612369 ARNT2Q9HBZ2 717 aa17.93■□□□□ 0.46
VCX3A-203ENST00000612369 TRIM10Q9UDY6 481 aa17.93■□□□□ 0.46
VCX3A-203ENST00000612369 PCDHGA3Q9Y5H0 932 aa17.93■□□□□ 0.46
VCX3A-203ENST00000612369 AHCTF1Q8WYP5 2266 aa17.92■□□□□ 0.46
VCX3A-203ENST00000612369 PDZK1P1A8MUH7 402 aa17.92■□□□□ 0.46
VCX3A-203ENST00000612369 C9orf172C9J069 976 aa17.92■□□□□ 0.46
VCX3A-203ENST00000612369 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.92■□□□□ 0.46
VCX3A-203ENST00000612369 K7ENP7 123 aa17.92■□□□□ 0.46
VCX3A-203ENST00000612369 ERVH48-1M5A8F1 160 aa17.92■□□□□ 0.46
VCX3A-203ENST00000612369 UGT1A9O60656 530 aa17.92■□□□□ 0.46
VCX3A-203ENST00000612369 CRTAMO95727 393 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms