RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 MRASO14807 208 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 NRP2O60462 931 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 MLYCDO95822 493 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 HGFP14210 728 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 BPIP17213 487 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 ATP4BP51164 291 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 MRPS22P82650 360 aaKnown RBP13.47□□□□□ -0.25
NEK3-205ENST00000610828 PLPP4Q5VZY2 271 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 LPCAT4Q643R3 524 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 LAYNQ6UX15 382 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 SYVN1Q86TM6 617 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 RBFAQ8N0V3 343 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 BHLHE22Q8NFJ8 381 aaPredicted RBP13.47□□□□□ -0.25
NEK3-205ENST00000610828 ZNF483Q8TF39 744 aaPredicted RBP13.47□□□□□ -0.25
NEK3-205ENST00000610828 TCEAL4Q96EI5 215 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 ECSITQ9BQ95 431 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 C17orf80Q9BSJ5 609 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 EMILIN2Q9BXX0 1053 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 IL23AQ9NPF7 189 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 BCAP29Q9UHQ4 241 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 CRLS1Q9UJA2 301 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 ASB1Q9Y576 335 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 NPIPB15A6NHN6 443 aaPredicted RBP13.47□□□□□ -0.25
NEK3-205ENST00000610828 E7ENX8 843 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 RFPL2O75678 378 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 ESRRBO95718 433 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 LBPP18428 481 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 GPX3P22352 226 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 ACADVLP49748 655 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 NAA20P61599 178 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 KLC1Q07866 573 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 CDC16Q13042 620 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 CDKN3Q16667 212 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 FUT11Q495W5 492 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 TMEM25Q86YD3 366 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 PHYKPLQ8IUZ5 450 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 FUNDC1Q8IVP5 155 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 DCBLD1Q8N8Z6 715 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 OR56A4Q8NGH8 313 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 GDPD5Q8WTR4 605 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 CLP1Q92989 425 aaKnown RBP13.47□□□□□ -0.25
NEK3-205ENST00000610828 TLR9Q9NR96 1032 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 GNPTGQ9UJJ9 305 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 ZNF225Q9UK10 706 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 CDH23Q9H251 3354 aa13.47□□□□□ -0.25
NEK3-205ENST00000610828 NEDD8-MDP1E9PL57 170 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 E2F3O00716 465 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 TRIM16O95361 564 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 CHEK2O96017 543 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 ACRV1P26436 265 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 PEX2P28328 305 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 SPAM1P38567 509 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 ARL1P40616 181 aaPredicted RBP13.46□□□□□ -0.25
NEK3-205ENST00000610828 HTRA4P83105 476 aaPredicted RBP13.46□□□□□ -0.25
NEK3-205ENST00000610828 BLMHQ13867 455 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 TRIP10Q15642 601 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 CHRNA6Q15825 494 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 ADAMTSL2Q86TH1 951 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 MIER2Q8N344 545 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 RIN3Q8TB24 985 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 GRIN3AQ8TCU5 1115 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 ASIC4Q96FT7 647 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 PLEKHG4BQ96PX9 1271 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 TMCO1Q9UM00 188 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 INSL6Q9Y581 213 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 PRSS21Q9Y6M0 314 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 NR5A2O00482 541 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 TRIM38O00635 465 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 SLC25A14O95258 325 aaPredicted RBP13.46□□□□□ -0.25
NEK3-205ENST00000610828 UROSP10746 265 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 RPS6KA2Q15349 733 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 TEAD2Q15562 447 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 MYLK3Q32MK0 819 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 C22orf39Q6P5X5 142 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 SCIMPQ6UWF3 145 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 NECAB2Q7Z6G3 386 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 LKAAEAR1Q8TD35 194 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 UCMAQ8WVF2 138 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 PDLIM5Q96HC4 596 aaKnown RBP13.46□□□□□ -0.25
NEK3-205ENST00000610828 VCX3BQ9H321 246 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 ZDHHC6Q9H6R6 413 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 SPAG4Q9NPE6 437 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 NUDT4Q9NZJ9 180 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 HS3ST2Q9Y278 367 aa13.46□□□□□ -0.25
NEK3-205ENST00000610828 CHD7Q9P2D1 2997 aa13.46□□□□□ -0.26
NEK3-205ENST00000610828 SCN8AQ9UQD0 1980 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 C9JVG2 144 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 BCAS2O75934 225 aaPredicted RBP13.45□□□□□ -0.26
NEK3-205ENST00000610828 RPS3P23396 243 aaKnown RBP eCLIP13.45□□□□□ -0.26
NEK3-205ENST00000610828 RALGDSQ12967 914 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 LRRC66Q68CR7 880 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 GRAMD4Q6IC98 578 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 CRTC1Q6UUV9 634 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 SBSNQ6UWP8 590 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 GPRIN3Q6ZVF9 776 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 OR52B6Q8NGF0 335 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 LMLNQ96KR4 655 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 CDK15Q96Q40 435 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 ACOX2Q99424 681 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 SLC39A3Q9BRY0 314 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms