RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 CCDC97Q96F63 343 aaPredicted RBP20.22■□□□□ 0.83
SSBP3-216ENST00000610401 FEM1CQ96JP0 617 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 COX4I2Q96KJ9 171 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 CSF3RQ99062 836 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 TOR3AQ9H497 397 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 CARS2Q9HA77 564 aaKnown RBP20.22■□□□□ 0.83
SSBP3-216ENST00000610401 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.22■□□□□ 0.83
SSBP3-216ENST00000610401 PNMA8BQ9ULN7 279 aaPredicted RBP20.22■□□□□ 0.83
SSBP3-216ENST00000610401 SPO11Q9Y5K1 396 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 GPR45Q9Y5Y3 372 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 PTCH2Q9Y6C5 1203 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 IDO1P14902 403 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 TSPY1Q01534 308 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 DNASE1L3Q13609 305 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 FSCN1Q16658 493 aaKnown RBP20.22■□□□□ 0.83
SSBP3-216ENST00000610401 GTDC1Q4AE62 458 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 INTS11Q5TA45 600 aaKnown RBP20.22■□□□□ 0.83
SSBP3-216ENST00000610401 PRR23BQ6ZRT6 265 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 RNF168Q8IYW5 571 aaPredicted RBP20.22■□□□□ 0.83
SSBP3-216ENST00000610401 MINDY1Q8N5J2 469 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 APOL5Q9BWW9 433 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 NOD1Q9Y239 953 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 FUOMA2VDF0 154 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 ARVCFO00192 962 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 DIRAS1O95057 198 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 PEX11BO96011 259 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 SPIDRQ14159 915 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 GNASQ5JWF2 1037 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 LCN8Q6JVE9 175 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 DCDC5Q6ZRR9 648 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 SLC16A10Q8TF71 515 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 FRS2Q8WU20 508 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 ATOH8Q96SQ7 321 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 GOLGA4Q13439 2230 aaKnown RBP20.21■□□□□ 0.83
SSBP3-216ENST00000610401 SLC12A8A0AV02 714 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 FGF10O15520 208 aaPredicted RBP20.21■□□□□ 0.83
SSBP3-216ENST00000610401 DFNA5O60443 496 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 RAMP2O60895 175 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 HMGCS1Q01581 520 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 MS4A13Q5J8X5 152 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 ANKRD46Q86W74 232 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 PIANPQ8IYJ0 282 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 MFSD2AQ8NA29 543 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 FAM210AQ96ND0 272 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 PCDHGA8Q9Y5G5 932 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 UNC80Q8N2C7 3258 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 MBLAC1A4D2B0 266 aaPredicted RBP20.21■□□□□ 0.83
SSBP3-216ENST00000610401 A8MU76 341 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 CFAP99D6REC4 459 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 SLC7A4O43246 635 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 MGEA5O60502 916 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 SPCS2Q15005 226 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 XKR4Q5GH76 650 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 SLC22A15Q8IZD6 547 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 TMEM86AQ8N2M4 240 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 BRI3BPQ8WY22 251 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 GFM2Q969S9 779 aaKnown RBP20.21■□□□□ 0.83
SSBP3-216ENST00000610401 ZUFSPQ96AP4 578 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 L3HYPDHQ96EM0 354 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 TRMOQ9BU70 441 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 MAF1Q9H063 256 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 AP5M1Q9H0R1 490 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 MFSD1Q9H3U5 465 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 INIPQ9NRY2 104 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 ZNHIT2Q9UHR6 403 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 SH3BP1Q9Y3L3 701 aa20.21■□□□□ 0.83
SSBP3-216ENST00000610401 UPK3BL1B0FP48 263 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 FAM155AB1AL88 458 aaPredicted RBP20.2■□□□□ 0.82
SSBP3-216ENST00000610401 UPK3BL2E5RIL1 263 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 TLR5O60602 858 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 ZNF189O75820 626 aaPredicted RBP20.2■□□□□ 0.82
SSBP3-216ENST00000610401 INMTO95050 263 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 CHEK2O96017 543 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 CAPN1P07384 714 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 ATXN1LP0C7T5 689 aaKnown RBP20.2■□□□□ 0.82
SSBP3-216ENST00000610401 DNAJB2P25686 324 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 THPOP40225 353 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 ARSFP54793 590 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 BNIP2Q12982 314 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 IQSEC1Q6DN90 963 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 LPCAT1Q8NF37 534 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 STAG3L4Q8TBR4 150 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 BORCS5Q969J3 196 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 BDH2Q9BUT1 245 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 ABCD2Q9UBJ2 740 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 DAPK2Q9UIK4 370 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 PAIP2BQ9ULR5 123 aaKnown RBP20.2■□□□□ 0.82
SSBP3-216ENST00000610401 E5RI56 91 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 H0YJX3 145 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 HSD17B1P14061 328 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 TGFBR1P36897 503 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 RGRP47804 291 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 EIF2B2P49770 351 aaKnown RBP20.2■□□□□ 0.82
SSBP3-216ENST00000610401 RELAQ04206 551 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 PGS1Q32NB8 556 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 KANK2Q63ZY3 851 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 LINGO4Q6UY18 593 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 PLEKHH3Q7Z736 793 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 CNIH3Q8TBE1 160 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 LINGO1Q96FE5 620 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms