RNA–Protein interactions for RNA: ENST00000606570.1

SNX5-218, Transcript of sorting nexin 5, humanhuman

Gene SNX5, Length 3,931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-218ENST00000606570 ZNF251Q9BRH9 671 aa6.88□□□□□ -1.31
SNX5-218ENST00000606570 RIBC2Q9H4K1 309 aa6.88□□□□□ -1.31
SNX5-218ENST00000606570 TRPV4Q9HBA0 871 aa6.88□□□□□ -1.31
SNX5-218ENST00000606570 NEUROD4Q9HD90 331 aa6.88□□□□□ -1.31
SNX5-218ENST00000606570 COA4Q9NYJ1 87 aa6.88□□□□□ -1.31
SNX5-218ENST00000606570 TJP2Q9UDY2 1190 aa6.88□□□□□ -1.31
SNX5-218ENST00000606570 LGALS13Q9UHV8 139 aa6.88□□□□□ -1.31
SNX5-218ENST00000606570 SAMHD1Q9Y3Z3 626 aaKnown RBP6.88□□□□□ -1.31
SNX5-218ENST00000606570 ZMYM2Q9UBW7 1377 aa6.88□□□□□ -1.31
SNX5-218ENST00000606570 ALS2Q96Q42 1657 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 LOC100653049A0A140TA62 436 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 FAM237BA0A1B0GVD1 139 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 PDZK1P1A8MUH7 402 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 F8VP50 259 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 TRAFD1O14545 582 aaPredicted RBP6.87□□□□□ -1.31
SNX5-218ENST00000606570 EIF3DO15371 548 aaKnown RBP eCLIP6.87□□□□□ -1.31
SNX5-218ENST00000606570 H2AFYO75367 372 aaKnown RBP6.87□□□□□ -1.31
SNX5-218ENST00000606570 POP7O75817 140 aaKnown RBP6.87□□□□□ -1.31
SNX5-218ENST00000606570 KRT34O76011 436 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 ZNF250P15622 560 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 RPL26P61254 145 aaKnown RBP6.87□□□□□ -1.31
SNX5-218ENST00000606570 SP2Q02086 613 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 PPP3CAQ08209 521 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 ZIK1Q3SY52 487 aaPredicted RBP6.87□□□□□ -1.31
SNX5-218ENST00000606570 DNAL1Q4LDG9 190 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 PLEKHG4Q58EX7 1191 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 Q5PR19 223 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 PLEKHG7Q6ZR37 379 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 GDPD3Q7L5L3 318 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 PLD6Q8N2A8 252 aaKnown RBP6.87□□□□□ -1.31
SNX5-218ENST00000606570 MARVELD2Q8N4S9 558 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 OXNAD1Q96HP4 312 aaPredicted RBP6.87□□□□□ -1.31
SNX5-218ENST00000606570 NSMCE2Q96MF7 247 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 TTYH2Q9BSA4 534 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 NAT9Q9BTE0 207 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 PI4K2AQ9BTU6 479 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 ZNF341Q9BYN7 854 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 WWP1Q9H0M0 922 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 GLOD4Q9HC38 313 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 HMG20AQ9NP66 347 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 ARHGAP28Q9P2N2 729 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 GMPR2Q9P2T1 348 aaKnown RBP6.87□□□□□ -1.31
SNX5-218ENST00000606570 SLC17A7Q9P2U7 560 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 CD300AQ9UGN4 299 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 AP4S1Q9Y587 144 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 POM121BA6NF01 834 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 CLDN25C9JDP6 229 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 MITFO75030 526 aaPredicted RBP6.87□□□□□ -1.31
SNX5-218ENST00000606570 FKBP6O75344 327 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 PRKD3O94806 890 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 RBP1P09455 135 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 INHBBP09529 407 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 RAB4AP20338 218 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 PIK3R1P27986 724 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 MAT2AP31153 395 aaKnown RBP6.87□□□□□ -1.31
SNX5-218ENST00000606570 TIE1P35590 1138 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 FDFT1P37268 417 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 ABCE1P61221 599 aaKnown RBP6.87□□□□□ -1.31
SNX5-218ENST00000606570 BNIP2Q12982 314 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 CBX2Q14781 532 aaPredicted RBP6.87□□□□□ -1.31
SNX5-218ENST00000606570 MLC1Q15049 377 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 CYP1B1Q16678 543 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 PFKFB4Q16877 469 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 KRTCAP3Q53RY4 240 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 LDLRAP1Q5SW96 308 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 FAM102BQ5T8I3 360 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 LGSNQ5TDP6 509 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 HDDC2Q7Z4H3 204 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 TTLL6Q8N841 843 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 ANKLE1Q8NAG6 615 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 OR52H1Q8NGJ2 320 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 SNX33Q8WV41 574 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 RSC1A1Q92681 617 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 CD101Q93033 1021 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 PTP4A1Q93096 173 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 DCPSQ96C86 337 aaKnown RBP6.87□□□□□ -1.31
SNX5-218ENST00000606570 PGAP3Q96FM1 320 aaPredicted RBP6.87□□□□□ -1.31
SNX5-218ENST00000606570 NMUR2Q9GZQ4 415 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 TLE6Q9H808 572 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 POLE4Q9NR33 117 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 MID2Q9UJV3 735 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 PPM1HQ9ULR3 514 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 RPH3ALQ9UNE2 315 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 KIF1AQ12756 1690 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 ECM29Q5VYK3 1845 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 A0A0A0MRY4 1105 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 TMX2-CTNND1H3BSU7 103 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 EML1O00423 815 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 SLC16A4O15374 487 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 MSH4O15457 936 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 DNAJB6O75190 326 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 EOMESO95936 686 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 F9P00740 461 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 NDUFB7P17568 137 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 PEX2P28328 305 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 PRDX6P30041 224 aa6.87□□□□□ -1.31
SNX5-218ENST00000606570 CCT3P49368 545 aaKnown RBP6.87□□□□□ -1.31
SNX5-218ENST00000606570 EIF3EP60228 445 aaKnown RBP6.87□□□□□ -1.31
SNX5-218ENST00000606570 MAT1AQ00266 395 aaKnown RBP6.87□□□□□ -1.31
SNX5-218ENST00000606570 ILF3Q12906 894 aaKnown RBP eCLIP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms