RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 BANPQ8N9N5 519 aa15.28■□□□□ 0.04
UPF1-206ENST00000598471 ACVR1CQ8NER5 493 aa15.28■□□□□ 0.04
UPF1-206ENST00000598471 KLK6Q92876 244 aa15.28■□□□□ 0.04
UPF1-206ENST00000598471 BIRC8Q96P09 236 aa15.28■□□□□ 0.04
UPF1-206ENST00000598471 LENG8Q96PV6 779 aaPredicted RBP15.28■□□□□ 0.04
UPF1-206ENST00000598471 OLFM1Q99784 485 aa15.28■□□□□ 0.04
UPF1-206ENST00000598471 PCED1AQ9H1Q7 454 aa15.28■□□□□ 0.04
UPF1-206ENST00000598471 WDR26Q9H7D7 661 aa15.28■□□□□ 0.04
UPF1-206ENST00000598471 SYTL2Q9HCH5 934 aa15.28■□□□□ 0.04
UPF1-206ENST00000598471 GPAMQ9HCL2 828 aa15.28■□□□□ 0.04
UPF1-206ENST00000598471 PHPT1Q9NRX4 125 aaPredicted RBP15.28■□□□□ 0.04
UPF1-206ENST00000598471 DLGAP2Q9P1A6 1054 aa15.28■□□□□ 0.04
UPF1-206ENST00000598471 DCDC2Q9UHG0 476 aa15.28■□□□□ 0.04
UPF1-206ENST00000598471 TMPRSS11EQ9UL52 423 aa15.28■□□□□ 0.04
UPF1-206ENST00000598471 ACOT9Q9Y305 439 aa15.28■□□□□ 0.04
UPF1-206ENST00000598471 IGHV1OR15-9A0A0B4J2B8 117 aa15.27■□□□□ 0.04
UPF1-206ENST00000598471 K7ESM1 405 aa15.27■□□□□ 0.04
UPF1-206ENST00000598471 AXIN1O15169 862 aa15.27■□□□□ 0.04
UPF1-206ENST00000598471 SLC31A1O15431 190 aa15.27■□□□□ 0.04
UPF1-206ENST00000598471 PHGDHO43175 533 aaKnown RBP15.27■□□□□ 0.04
UPF1-206ENST00000598471 VEGFDO43915 354 aa15.27■□□□□ 0.04
UPF1-206ENST00000598471 SPAG7O75391 227 aa15.27■□□□□ 0.04
UPF1-206ENST00000598471 ZWINTO95229 277 aa15.27■□□□□ 0.04
UPF1-206ENST00000598471 FTH1P02794 183 aa15.27■□□□□ 0.04
UPF1-206ENST00000598471 GSTA1P08263 222 aa15.27■□□□□ 0.04
UPF1-206ENST00000598471 HNRNPA2B1P22626 353 aaKnown RBP15.27■□□□□ 0.04
UPF1-206ENST00000598471 AKT2P31751 481 aa15.27■□□□□ 0.04
UPF1-206ENST00000598471 CA5AP35218 305 aa15.27■□□□□ 0.04
UPF1-206ENST00000598471 SLC26A3P40879 764 aa15.27■□□□□ 0.04
UPF1-206ENST00000598471 CDKN2DP55273 166 aa15.27■□□□□ 0.04
UPF1-206ENST00000598471 PDE1CQ14123 709 aaPredicted RBP15.27■□□□□ 0.04
UPF1-206ENST00000598471 FGL2Q14314 439 aa15.27■□□□□ 0.04
UPF1-206ENST00000598471 INSCQ1MX18 579 aa15.27■□□□□ 0.04
UPF1-206ENST00000598471 USP39Q53GS9 565 aaKnown RBP15.27■□□□□ 0.04
UPF1-206ENST00000598471 HEATR4Q86WZ0 1026 aa15.27■□□□□ 0.04
UPF1-206ENST00000598471 FBXL6Q8N531 539 aa15.27■□□□□ 0.04
UPF1-206ENST00000598471 GPR174Q9BXC1 333 aa15.27■□□□□ 0.04
UPF1-206ENST00000598471 SLC13A1Q9BZW2 595 aa15.27■□□□□ 0.04
UPF1-206ENST00000598471 TRIM39Q9HCM9 518 aa15.27■□□□□ 0.04
UPF1-206ENST00000598471 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.27■□□□□ 0.04
UPF1-206ENST00000598471 GRID1Q9ULK0 1009 aa15.27■□□□□ 0.04
UPF1-206ENST00000598471 DMTF1Q9Y222 760 aa15.27■□□□□ 0.04
UPF1-206ENST00000598471 TMEM120BA0PK00 339 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 FPGTO14772 594 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 TM9SF1O15321 606 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 LATO43561 262 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 MAGEC1O60732 1142 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 NIPSNAP2O75323 286 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 MTX2O75431 263 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 FSBPO95073 299 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 SLC35E2BP0CK96 405 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 CREB1P16220 341 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 HOXA6P31267 233 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 CRHR1P34998 444 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 SLC18A1P54219 525 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 CDK3Q00526 305 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 B4GALNT1Q00973 533 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 TMEM115Q12893 351 aaPredicted RBP15.26■□□□□ 0.03
UPF1-206ENST00000598471 TSNAXIP1Q2TAA8 658 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 TTLL9Q3SXZ7 439 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 SLC36A4Q6YBV0 504 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 KDM7AQ6ZMT4 941 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 SH2D5Q6ZV89 423 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 CEP97Q8IW35 865 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 CLDN19Q8N6F1 224 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 TMEM105Q8N8V8 129 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 PLA2G15Q8NCC3 412 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 CENPTQ96BT3 561 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 COX14Q96I36 57 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 ZNF514Q96K75 400 aaPredicted RBP15.26■□□□□ 0.03
UPF1-206ENST00000598471 GPR21Q99679 349 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 TEX101Q9BY14 249 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 SARS2Q9NP81 518 aaKnown RBP15.26■□□□□ 0.03
UPF1-206ENST00000598471 MBNL1Q9NR56 388 aaKnown RBP15.26■□□□□ 0.03
UPF1-206ENST00000598471 CNOT6Q9ULM6 557 aaKnown RBP15.26■□□□□ 0.03
UPF1-206ENST00000598471 OAS3Q9Y6K5 1087 aaKnown RBP15.26■□□□□ 0.03
UPF1-206ENST00000598471 LRRK1Q38SD2 2015 aa15.26■□□□□ 0.03
UPF1-206ENST00000598471 BDP1A6H8Y1 2624 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 CCDC163A0A0D9SF12 145 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 K7ESF4 209 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 CACNB4O00305 520 aaPredicted RBP15.25■□□□□ 0.03
UPF1-206ENST00000598471 TOR1BO14657 336 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 KPNA5O15131 536 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 LAMTOR5O43504 91 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 TYROBPO43914 113 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 CDK14O94921 469 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 TRIM16O95361 564 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 ASMTLO95671 621 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 MYCLP1P12525 358 aaPredicted RBP15.25■□□□□ 0.03
UPF1-206ENST00000598471 AVPR2P30518 371 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 IGFALSP35858 605 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 TRIM23P36406 574 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 PXNP49023 591 aaPredicted RBP15.25■□□□□ 0.03
UPF1-206ENST00000598471 CSRP3P50461 194 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 INPP5AQ14642 412 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 FAM83EQ2M2I3 478 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 PPM1JQ5JR12 505 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 AGAP9Q5VTM2 703 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 KLC3Q6P597 504 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 DET1Q7L5Y6 550 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms