RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 MDM1Q8TC05 714 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 ACTRT1Q8TDG2 376 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 SLC37A2Q8TED4 501 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 STYXQ8WUJ0 223 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 MAGOHBQ96A72 148 aaKnown RBP16.49■□□□□ 0.23
SSBP4-204ENST00000597724 DNAJC1Q96KC8 554 aaKnown RBP16.49■□□□□ 0.23
SSBP4-204ENST00000597724 GFM1Q96RP9 751 aaKnown RBP16.49■□□□□ 0.23
SSBP4-204ENST00000597724 NRSN2Q9GZP1 204 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 LRRN3Q9H3W5 708 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 CCDC86Q9H6F5 360 aaKnown RBP16.49■□□□□ 0.23
SSBP4-204ENST00000597724 SMARCAL1Q9NZC9 954 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 DKK4Q9UBT3 224 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 PCDHB1Q9Y5F3 818 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 ANKRD11Q6UB99 2663 aaPredicted RBP16.49■□□□□ 0.23
SSBP4-204ENST00000597724 TRBV23OR9-2A0A075B6M9 112 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 RHPN2P1A8MT19 583 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 CCL22O00626 93 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 B4GAT1O43505 415 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 SNX2O60749 519 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 GAS8O95995 478 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 F3P13726 295 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 MSH3P20585 1137 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 MC4RP32245 332 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 GPR3P46089 330 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 FASLGP48023 281 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 CTSCP53634 463 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 CCDC173Q0VFZ6 552 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 RTP5Q14D33 572 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 PLA2G4EQ3MJ16 856 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 GPR33Q49SQ1 333 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 CCDC38Q502W7 563 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 SNX20Q7Z614 316 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 GRAMD1AQ96CP6 724 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 CDKN2AIPNLQ96HQ2 116 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 OSGEPL1Q9H4B0 414 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 SYNDIG1Q9H7V2 258 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 PRDM8Q9NQV8 689 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 EIF2B3Q9NR50 452 aaKnown RBP16.48■□□□□ 0.23
SSBP4-204ENST00000597724 ENTPD2Q9Y5L3 495 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 SLC30A1Q9Y6M5 507 aa16.48■□□□□ 0.23
SSBP4-204ENST00000597724 TRBV5-4A0A0C4DH59 114 aa16.47■□□□□ 0.23
SSBP4-204ENST00000597724 HEATR9A2RTY3 570 aa16.47■□□□□ 0.23
SSBP4-204ENST00000597724 D6RAR5 112 aa16.47■□□□□ 0.23
SSBP4-204ENST00000597724 ZNF185O15231 689 aa16.47■□□□□ 0.23
SSBP4-204ENST00000597724 SLC2A4P14672 509 aa16.47■□□□□ 0.23
SSBP4-204ENST00000597724 ITGALP20701 1170 aa16.47■□□□□ 0.23
SSBP4-204ENST00000597724 AKT1P31749 480 aa16.47■□□□□ 0.23
SSBP4-204ENST00000597724 COILP38432 576 aaPredicted RBP16.47■□□□□ 0.23
SSBP4-204ENST00000597724 PDX1P52945 283 aa16.47■□□□□ 0.23
SSBP4-204ENST00000597724 OR1D5P58170 312 aa16.47■□□□□ 0.23
SSBP4-204ENST00000597724 BASP1P80723 227 aaKnown RBP16.47■□□□□ 0.23
SSBP4-204ENST00000597724 CYP4F3Q08477 520 aa16.47■□□□□ 0.23
SSBP4-204ENST00000597724 BIRC2Q13490 618 aa16.47■□□□□ 0.23
SSBP4-204ENST00000597724 ST3GAL2Q16842 350 aa16.47■□□□□ 0.23
SSBP4-204ENST00000597724 SKIDA1Q1XH10 827 aa16.47■□□□□ 0.23
SSBP4-204ENST00000597724 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.47■□□□□ 0.23
SSBP4-204ENST00000597724 TMEM220Q6QAJ8 160 aa16.47■□□□□ 0.23
SSBP4-204ENST00000597724 NXPE1Q8N323 547 aa16.47■□□□□ 0.23
SSBP4-204ENST00000597724 ZCCHC14Q8WYQ9 949 aaKnown RBP16.47■□□□□ 0.23
SSBP4-204ENST00000597724 ULK4Q96C45 1275 aa16.47■□□□□ 0.23
SSBP4-204ENST00000597724 NXPE2Q96DL1 559 aa16.47■□□□□ 0.23
SSBP4-204ENST00000597724 ZNF514Q96K75 400 aaPredicted RBP16.47■□□□□ 0.23
SSBP4-204ENST00000597724 RANBP9Q96S59 729 aa16.47■□□□□ 0.23
SSBP4-204ENST00000597724 CRLS1Q9UJA2 301 aa16.47■□□□□ 0.23
SSBP4-204ENST00000597724 DNAJC16Q9Y2G8 782 aa16.47■□□□□ 0.23
SSBP4-204ENST00000597724 DNMT3AQ9Y6K1 912 aaPredicted RBP16.47■□□□□ 0.23
SSBP4-204ENST00000597724 KMT2BQ9UMN6 2715 aaPredicted RBP16.47■□□□□ 0.23
SSBP4-204ENST00000597724 DSPP15924 2871 aaKnown RBP16.46■□□□□ 0.23
SSBP4-204ENST00000597724 KIR2DS5A0A0G2JLQ3 304 aa16.46■□□□□ 0.23
SSBP4-204ENST00000597724 A0A0G2JNG1 304 aa16.46■□□□□ 0.23
SSBP4-204ENST00000597724 OR2AG2A6NM03 316 aa16.46■□□□□ 0.23
SSBP4-204ENST00000597724 OR5K4A6NMS3 321 aa16.46■□□□□ 0.23
SSBP4-204ENST00000597724 KIR2DS3K7RE56 304 aa16.46■□□□□ 0.23
SSBP4-204ENST00000597724 KCNJ13O60928 360 aa16.46■□□□□ 0.23
SSBP4-204ENST00000597724 POP7O75817 140 aaKnown RBP16.46■□□□□ 0.23
SSBP4-204ENST00000597724 KRT14P02533 472 aa16.46■□□□□ 0.23
SSBP4-204ENST00000597724 TCP1P17987 556 aaKnown RBP16.46■□□□□ 0.23
SSBP4-204ENST00000597724 VCLP18206 1134 aa16.46■□□□□ 0.23
SSBP4-204ENST00000597724 ADRA1DP25100 572 aa16.46■□□□□ 0.23
SSBP4-204ENST00000597724 ALDH4A1P30038 563 aa16.46■□□□□ 0.23
SSBP4-204ENST00000597724 CDKN1CP49918 316 aaPredicted RBP16.46■□□□□ 0.23
SSBP4-204ENST00000597724 GNG11P61952 73 aa16.46■□□□□ 0.23
SSBP4-204ENST00000597724 LAMB3Q13751 1172 aa16.46■□□□□ 0.23
SSBP4-204ENST00000597724 KIR2DS5Q14953 304 aa16.46■□□□□ 0.23
SSBP4-204ENST00000597724 TRIP13Q15645 432 aaPredicted RBP16.46■□□□□ 0.23
SSBP4-204ENST00000597724 KCTD19Q17RG1 926 aaPredicted RBP16.46■□□□□ 0.23
SSBP4-204ENST00000597724 ZRANB3Q5FWF4 1079 aa16.46■□□□□ 0.23
SSBP4-204ENST00000597724 CCDC137Q6PK04 289 aaKnown RBP16.46■□□□□ 0.23
SSBP4-204ENST00000597724 MICALCLQ6ZW33 695 aa16.46■□□□□ 0.23
SSBP4-204ENST00000597724 AMZ2Q86W34 360 aa16.46■□□□□ 0.23
SSBP4-204ENST00000597724 SGF29Q96ES7 293 aa16.46■□□□□ 0.23
SSBP4-204ENST00000597724 ATXN7L3BQ96GX2 97 aa16.46■□□□□ 0.23
SSBP4-204ENST00000597724 FAM96AQ9H5X1 160 aa16.46■□□□□ 0.23
SSBP4-204ENST00000597724 SARS2Q9NP81 518 aaKnown RBP16.46■□□□□ 0.23
SSBP4-204ENST00000597724 SCHIP1Q9P0W5 487 aaPredicted RBP16.46■□□□□ 0.23
SSBP4-204ENST00000597724 RIMKLBQ9ULI2 386 aa16.46■□□□□ 0.23
SSBP4-204ENST00000597724 ZMIZ1Q9ULJ6 1067 aa16.46■□□□□ 0.23
SSBP4-204ENST00000597724 AK5Q9Y6K8 562 aa16.46■□□□□ 0.23
SSBP4-204ENST00000597724 APC2O95996 2303 aa16.45■□□□□ 0.22
SSBP4-204ENST00000597724 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms