RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 UCNP55089 124 aa15.06■□□□□ 0
TRIM28-203ENST00000593582 TMEM115Q12893 351 aaPredicted RBP15.06■□□□□ 0
TRIM28-203ENST00000593582 KLF1Q13351 362 aaPredicted RBP15.06■□□□□ 0
TRIM28-203ENST00000593582 NFATC2Q13469 925 aa15.06■□□□□ 0
TRIM28-203ENST00000593582 TRA2AQ13595 282 aaKnown RBP eCLIP15.06■□□□□ 0
TRIM28-203ENST00000593582 CHRNA6Q15825 494 aa15.06■□□□□ 0
TRIM28-203ENST00000593582 PLA2G4EQ3MJ16 856 aa15.06■□□□□ 0
TRIM28-203ENST00000593582 KHDC1Q4VXA5 237 aaKnown RBP15.06■□□□□ 0
TRIM28-203ENST00000593582 LDLRAP1Q5SW96 308 aa15.06■□□□□ 0
TRIM28-203ENST00000593582 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.06■□□□□ 0
TRIM28-203ENST00000593582 ZNF574Q6ZN55 896 aaPredicted RBP15.06■□□□□ 0
TRIM28-203ENST00000593582 ARHGEF18Q6ZSZ5 1173 aa15.06■□□□□ 0
TRIM28-203ENST00000593582 ZNF761Q86XN6 746 aaPredicted RBP15.06■□□□□ 0
TRIM28-203ENST00000593582 TRAPPC5Q8IUR0 188 aa15.06■□□□□ 0
TRIM28-203ENST00000593582 CCDC112Q8NEF3 446 aa15.06■□□□□ 0
TRIM28-203ENST00000593582 UBE2Q2Q8WVN8 375 aa15.06■□□□□ 0
TRIM28-203ENST00000593582 FCRL3Q96P31 734 aaPredicted RBP15.06■□□□□ 0
TRIM28-203ENST00000593582 APOL2Q9BQE5 337 aa15.06■□□□□ 0
TRIM28-203ENST00000593582 TIMM29Q9BSF4 260 aa15.06■□□□□ 0
TRIM28-203ENST00000593582 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.06■□□□□ 0
TRIM28-203ENST00000593582 PRORYQ9H606 182 aa15.06■□□□□ 0
TRIM28-203ENST00000593582 PRDM8Q9NQV8 689 aa15.06■□□□□ 0
TRIM28-203ENST00000593582 TMPRSS11EQ9UL52 423 aa15.06■□□□□ 0
TRIM28-203ENST00000593582 GUCA1BQ9UMX6 200 aa15.06■□□□□ 0
TRIM28-203ENST00000593582 ARL5AQ9Y689 179 aa15.06■□□□□ 0
TRIM28-203ENST00000593582 UNC13CQ8NB66 2214 aa15.05■□□□□ 0
TRIM28-203ENST00000593582 HGSO14964 777 aaPredicted RBP15.05■□□□□ -0
TRIM28-203ENST00000593582 NVLO15381 856 aaKnown RBP15.05■□□□□ -0
TRIM28-203ENST00000593582 ARHGAP6O43182 974 aa15.05■□□□□ -0
TRIM28-203ENST00000593582 DUX1O43812 170 aa15.05■□□□□ -0
TRIM28-203ENST00000593582 UGT1A9O60656 530 aa15.05■□□□□ -0
TRIM28-203ENST00000593582 HOXB3P14651 431 aaPredicted RBP15.05■□□□□ -0
TRIM28-203ENST00000593582 UGT1A6P19224 532 aa15.05■□□□□ -0
TRIM28-203ENST00000593582 ITIH1P19827 911 aa15.05■□□□□ -0
TRIM28-203ENST00000593582 UGT1A1P22309 533 aa15.05■□□□□ -0
TRIM28-203ENST00000593582 UGT1A4P22310 534 aa15.05■□□□□ -0
TRIM28-203ENST00000593582 SLC5A2P31639 672 aa15.05■□□□□ -0
TRIM28-203ENST00000593582 UGT1A3P35503 534 aa15.05■□□□□ -0
TRIM28-203ENST00000593582 LIMK2P53671 638 aa15.05■□□□□ -0
TRIM28-203ENST00000593582 TMPRSS3P57727 454 aa15.05■□□□□ -0
TRIM28-203ENST00000593582 PDE1BQ01064 536 aa15.05■□□□□ -0
TRIM28-203ENST00000593582 TAF1AQ15573 450 aaPredicted RBP15.05■□□□□ -0
TRIM28-203ENST00000593582 ZNF547Q8IVP9 402 aa15.05■□□□□ -0
TRIM28-203ENST00000593582 FAM71DQ8N9W8 422 aa15.05■□□□□ -0
TRIM28-203ENST00000593582 RCBTB1Q8NDN9 531 aa15.05■□□□□ -0
TRIM28-203ENST00000593582 CCDC74BQ96LY2 380 aa15.05■□□□□ -0
TRIM28-203ENST00000593582 TBL1YQ9BQ87 522 aa15.05■□□□□ -0
TRIM28-203ENST00000593582 UGT1A7Q9HAW7 530 aa15.05■□□□□ -0
TRIM28-203ENST00000593582 UGT1A10Q9HAW8 530 aa15.05■□□□□ -0
TRIM28-203ENST00000593582 UGT1A8Q9HAW9 530 aa15.05■□□□□ -0
TRIM28-203ENST00000593582 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.05■□□□□ -0
TRIM28-203ENST00000593582 CPNE7Q9UBL6 633 aa15.05■□□□□ -0
TRIM28-203ENST00000593582 SLC23A2Q9UGH3 650 aa15.05■□□□□ -0
TRIM28-203ENST00000593582 FEZ2Q9UHY8 353 aaPredicted RBP15.05■□□□□ -0
TRIM28-203ENST00000593582 DNAJC16Q9Y2G8 782 aa15.05■□□□□ -0
TRIM28-203ENST00000593582 PDZK1P1A8MUH7 402 aa15.04■□□□□ -0
TRIM28-203ENST00000593582 PRAMEF1O95521 474 aa15.04■□□□□ -0
TRIM28-203ENST00000593582 CRTAMO95727 393 aa15.04■□□□□ -0
TRIM28-203ENST00000593582 CSF2RBP32927 897 aa15.04■□□□□ -0
TRIM28-203ENST00000593582 MAPK10P53779 464 aa15.04■□□□□ -0
TRIM28-203ENST00000593582 CXADRP78310 365 aa15.04■□□□□ -0
TRIM28-203ENST00000593582 OLIG2Q13516 323 aa15.04■□□□□ -0
TRIM28-203ENST00000593582 PTPRCAPQ14761 206 aa15.04■□□□□ -0
TRIM28-203ENST00000593582 C16orf72Q14CZ0 275 aa15.04■□□□□ -0
TRIM28-203ENST00000593582 SEPT7Q16181 437 aaKnown RBP15.04■□□□□ -0
TRIM28-203ENST00000593582 PARP6Q2NL67 630 aa15.04■□□□□ -0
TRIM28-203ENST00000593582 GPRC6AQ5T6X5 926 aa15.04■□□□□ -0
TRIM28-203ENST00000593582 TMEM164Q5U3C3 297 aa15.04■□□□□ -0
TRIM28-203ENST00000593582 TMEM71Q6P5X7 295 aa15.04■□□□□ -0
TRIM28-203ENST00000593582 WDR74Q6RFH5 385 aaPredicted RBP15.04■□□□□ -0
TRIM28-203ENST00000593582 TRIM48Q8IWZ4 208 aa15.04■□□□□ -0
TRIM28-203ENST00000593582 AGBL5Q8NDL9 886 aa15.04■□□□□ -0
TRIM28-203ENST00000593582 DDHD1Q8NEL9 900 aa15.04■□□□□ -0
TRIM28-203ENST00000593582 OR4K2Q8NGD2 314 aa15.04■□□□□ -0
TRIM28-203ENST00000593582 R3HDM2Q9Y2K5 976 aaKnown RBP15.04■□□□□ -0
TRIM28-203ENST00000593582 KIF26BQ2KJY2 2108 aa15.04■□□□□ -0
TRIM28-203ENST00000593582 TCRBV7S2A1N4TA0A589 114 aa15.03■□□□□ -0
TRIM28-203ENST00000593582 GAPDHSO14556 408 aaPredicted RBP15.03■□□□□ -0
TRIM28-203ENST00000593582 GPR39O43194 453 aa15.03■□□□□ -0
TRIM28-203ENST00000593582 KCNJ13O60928 360 aa15.03■□□□□ -0
TRIM28-203ENST00000593582 THRAP10827 490 aa15.03■□□□□ -0
TRIM28-203ENST00000593582 XRCC1P18887 633 aaPredicted RBP15.03■□□□□ -0
TRIM28-203ENST00000593582 IDSP22304 550 aa15.03■□□□□ -0
TRIM28-203ENST00000593582 MPSTP25325 297 aa15.03■□□□□ -0
TRIM28-203ENST00000593582 RPL10P27635 214 aaKnown RBP15.03■□□□□ -0
TRIM28-203ENST00000593582 CSTF2P33240 577 aaKnown RBP eCLIP15.03■□□□□ -0
TRIM28-203ENST00000593582 EPHA4P54764 986 aa15.03■□□□□ -0
TRIM28-203ENST00000593582 CFHR1Q03591 330 aa15.03■□□□□ -0
TRIM28-203ENST00000593582 SPARCL1Q14515 664 aa15.03■□□□□ -0
TRIM28-203ENST00000593582 P3H1Q32P28 736 aa15.03■□□□□ -0
TRIM28-203ENST00000593582 SEL1L2Q5TEA6 688 aa15.03■□□□□ -0
TRIM28-203ENST00000593582 GPR155Q7Z3F1 870 aa15.03■□□□□ -0
TRIM28-203ENST00000593582 AMZ2Q86W34 360 aa15.03■□□□□ -0
TRIM28-203ENST00000593582 SLC35B2Q8TB61 432 aa15.03■□□□□ -0
TRIM28-203ENST00000593582 ZNF398Q8TD17 642 aa15.03■□□□□ -0
TRIM28-203ENST00000593582 NCSTNQ92542 709 aa15.03■□□□□ -0
TRIM28-203ENST00000593582 ZNF514Q96K75 400 aaPredicted RBP15.03■□□□□ -0
TRIM28-203ENST00000593582 TMEM121Q9BTD3 319 aa15.03■□□□□ -0
TRIM28-203ENST00000593582 EPB41L1Q9H4G0 881 aa15.03■□□□□ -0
TRIM28-203ENST00000593582 LRRC40Q9H9A6 602 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms