RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 AHCYL2Q96HN2 611 aaKnown RBP9.94□□□□□ -0.82
BRCA1-227ENST00000591849 ZNF514Q96K75 400 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-227ENST00000591849 DNAJC1Q96KC8 554 aaKnown RBP9.94□□□□□ -0.82
BRCA1-227ENST00000591849 TTC1Q99614 292 aa9.94□□□□□ -0.82
BRCA1-227ENST00000591849 TMEM121BQ9BXQ6 578 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-227ENST00000591849 STRADBQ9C0K7 418 aa9.94□□□□□ -0.82
BRCA1-227ENST00000591849 ZMIZ1Q9ULJ6 1067 aa9.94□□□□□ -0.82
BRCA1-227ENST00000591849 GOLGA4Q13439 2230 aaKnown RBP9.94□□□□□ -0.82
BRCA1-227ENST00000591849 ARID1BQ8NFD5 2236 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-227ENST00000591849 HEATR9A2RTY3 570 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 OR2AG2A6NM03 316 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 CCL22O00626 93 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 CHUKO15111 745 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 KCNJ13O60928 360 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 POP7O75817 140 aaKnown RBP9.93□□□□□ -0.82
BRCA1-227ENST00000591849 KRT14P02533 472 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 ADRA1DP25100 572 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 HALP42357 657 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 ZNF140P52738 457 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-227ENST00000591849 SESN2P58004 480 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-227ENST00000591849 OR1D5P58170 312 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 GPS1Q13098 491 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 NFATC2Q13469 925 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 SEMA5AQ13591 1074 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 SEPT7Q16181 437 aaKnown RBP9.93□□□□□ -0.82
BRCA1-227ENST00000591849 ISXQ2M1V0 245 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 MAP9Q49MG5 647 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 GPR33Q49SQ1 333 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 CCDC38Q502W7 563 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 FNBP1LQ5T0N5 605 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 CDCP2Q5VXM1 449 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 ZNF449Q6P9G9 518 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 IYDQ6PHW0 289 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 USP53Q70EK8 1073 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 NLRP9Q7RTR0 991 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 SNX20Q7Z614 316 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 PIM3Q86V86 326 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 AMZ2Q86W34 360 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 KLHDC8BQ8IXV7 354 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 NAGSQ8N159 534 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 RASGEF1CQ8N431 466 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 GLIS1Q8NBF1 620 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 AVL9Q8NBF6 648 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 DDHD1Q8NEL9 900 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 PPHLN1Q8NEY8 458 aaKnown RBP9.93□□□□□ -0.82
BRCA1-227ENST00000591849 ACTRT1Q8TDG2 376 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 GRK7Q8WTQ7 553 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 PATE1Q8WXA2 126 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 GRAMD1AQ96CP6 724 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 TMEM74Q96NL1 305 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 COPS8Q99627 209 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 TIMM29Q9BSF4 260 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 NRSN2Q9GZP1 204 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 EPB41L5Q9HCM4 733 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 PRDM8Q9NQV8 689 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 NLE1Q9NVX2 485 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-227ENST00000591849 KCNK4Q9NYG8 393 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 BFARQ9NZS9 450 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 AKAP7Q9P0M2 348 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-227ENST00000591849 TBC1D29Q9UFV1 150 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 ANAPC5Q9UJX4 755 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 TMPRSS11EQ9UL52 423 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 ATXN7L1Q9ULK2 861 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-227ENST00000591849 TTC7AQ9ULT0 858 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-227ENST00000591849 PYCARDQ9ULZ3 195 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 SNX12Q9UMY4 172 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 DNMT3AQ9Y6K1 912 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-227ENST00000591849 LRRK1Q38SD2 2015 aa9.93□□□□□ -0.82
BRCA1-227ENST00000591849 COL5A1P20908 1838 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-227ENST00000591849 APC2O95996 2303 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 KIR2DS5A0A0G2JLQ3 304 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 A0A0G2JNG1 304 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 CTAGE9A4FU28 777 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 USP27XA6NNY8 438 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 KIR2DS3K7RE56 304 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 GPR39O43194 453 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 LDB2O43679 373 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 SUN1O94901 812 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 VIPP01282 170 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 F3P13726 295 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 RBMS1P29558 406 aaKnown RBP9.92□□□□□ -0.82
BRCA1-227ENST00000591849 PPARGP37231 505 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-227ENST00000591849 COILP38432 576 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-227ENST00000591849 GRIA1P42261 906 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 PAFAH1B1P43034 410 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 MAPK9P45984 424 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 GPR3P46089 330 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 NPY2RP49146 381 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 CLCNKAP51800 687 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 INHBCP55103 352 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 PRAMEP78395 509 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 XIAPP98170 497 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 HHEXQ03014 270 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 CACNG1Q06432 222 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 MSLNQ13421 630 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-227ENST00000591849 KRT33BQ14525 404 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 KIR2DS5Q14953 304 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 PPP1R7Q15435 360 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 KHDC1Q4VXA5 237 aaKnown RBP9.92□□□□□ -0.82
BRCA1-227ENST00000591849 PHF19Q5T6S3 580 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms