RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 TTC27Q6P3X3 843 aa17.96■□□□□ 0.47
DDX39A-212ENST00000590260 SLITRK4Q8IW52 837 aa17.96■□□□□ 0.47
DDX39A-212ENST00000590260 WDR48Q8TAF3 677 aa17.96■□□□□ 0.47
DDX39A-212ENST00000590260 COG1Q8WTW3 980 aa17.96■□□□□ 0.47
DDX39A-212ENST00000590260 FAM96AQ9H5X1 160 aa17.96■□□□□ 0.47
DDX39A-212ENST00000590260 RDH14Q9HBH5 336 aa17.96■□□□□ 0.47
DDX39A-212ENST00000590260 FEZ2Q9UHY8 353 aaPredicted RBP17.96■□□□□ 0.47
DDX39A-212ENST00000590260 SATB2Q9UPW6 733 aa17.96■□□□□ 0.47
DDX39A-212ENST00000590260 ZKSCAN5Q9Y2L8 839 aa17.96■□□□□ 0.47
DDX39A-212ENST00000590260 JRKLQ9Y4A0 524 aa17.96■□□□□ 0.47
DDX39A-212ENST00000590260 PRAMEF33A0A0G2JMD5 474 aa17.95■□□□□ 0.46
DDX39A-212ENST00000590260 MROH6A6NGR9 719 aa17.95■□□□□ 0.46
DDX39A-212ENST00000590260 KMOO15229 486 aa17.95■□□□□ 0.46
DDX39A-212ENST00000590260 CRTAMO95727 393 aa17.95■□□□□ 0.46
DDX39A-212ENST00000590260 F3P13726 295 aa17.95■□□□□ 0.46
DDX39A-212ENST00000590260 CSF2RBP32927 897 aa17.95■□□□□ 0.46
DDX39A-212ENST00000590260 FDFT1P37268 417 aa17.95■□□□□ 0.46
DDX39A-212ENST00000590260 ARSDP51689 593 aa17.95■□□□□ 0.46
DDX39A-212ENST00000590260 ZFP36L1Q07352 338 aaKnown RBP17.95■□□□□ 0.46
DDX39A-212ENST00000590260 NFATC2Q13469 925 aa17.95■□□□□ 0.46
DDX39A-212ENST00000590260 LONRF2Q1L5Z9 754 aa17.95■□□□□ 0.46
DDX39A-212ENST00000590260 NKAIN2Q5VXU1 208 aa17.95■□□□□ 0.46
DDX39A-212ENST00000590260 FAM83HQ6ZRV2 1179 aaPredicted RBP17.95■□□□□ 0.46
DDX39A-212ENST00000590260 C19orf43Q9BQ61 176 aa17.95■□□□□ 0.46
DDX39A-212ENST00000590260 NUDT22Q9BRQ3 303 aa17.95■□□□□ 0.46
DDX39A-212ENST00000590260 TIMM29Q9BSF4 260 aa17.95■□□□□ 0.46
DDX39A-212ENST00000590260 ASB8Q9H765 288 aa17.95■□□□□ 0.46
DDX39A-212ENST00000590260 ASCL3Q9NQ33 180 aa17.95■□□□□ 0.46
DDX39A-212ENST00000590260 CASS4Q9NQ75 786 aa17.95■□□□□ 0.46
DDX39A-212ENST00000590260 RAB6BQ9NRW1 208 aa17.95■□□□□ 0.46
DDX39A-212ENST00000590260 NLE1Q9NVX2 485 aaPredicted RBP17.95■□□□□ 0.46
DDX39A-212ENST00000590260 ZNF624Q9P2J8 865 aaPredicted RBP17.95■□□□□ 0.46
DDX39A-212ENST00000590260 PYCARDQ9ULZ3 195 aa17.95■□□□□ 0.46
DDX39A-212ENST00000590260 DNAJC16Q9Y2G8 782 aa17.95■□□□□ 0.46
DDX39A-212ENST00000590260 AK5Q9Y6K8 562 aa17.95■□□□□ 0.46
DDX39A-212ENST00000590260 KNTC1P50748 2209 aa17.94■□□□□ 0.46
DDX39A-212ENST00000590260 IGHV1OR21-1A0A087WYE8 117 aa17.94■□□□□ 0.46
DDX39A-212ENST00000590260 TRBV5-4A0A0C4DH59 114 aa17.94■□□□□ 0.46
DDX39A-212ENST00000590260 CCDC78A2IDD5 438 aa17.94■□□□□ 0.46
DDX39A-212ENST00000590260 H7C0S8 307 aa17.94■□□□□ 0.46
DDX39A-212ENST00000590260 PSMD3O43242 534 aa17.94■□□□□ 0.46
DDX39A-212ENST00000590260 SNX2O60749 519 aa17.94■□□□□ 0.46
DDX39A-212ENST00000590260 ALDH4A1P30038 563 aa17.94■□□□□ 0.46
DDX39A-212ENST00000590260 UBE2IP63279 158 aaKnown RBP17.94■□□□□ 0.46
DDX39A-212ENST00000590260 GABREP78334 506 aa17.94■□□□□ 0.46
DDX39A-212ENST00000590260 ITGA9Q13797 1035 aa17.94■□□□□ 0.46
DDX39A-212ENST00000590260 INSCQ1MX18 579 aa17.94■□□□□ 0.46
DDX39A-212ENST00000590260 CCDC38Q502W7 563 aa17.94■□□□□ 0.46
DDX39A-212ENST00000590260 C3orf38Q5JPI3 329 aa17.94■□□□□ 0.46
DDX39A-212ENST00000590260 LDLRAP1Q5SW96 308 aa17.94■□□□□ 0.46
DDX39A-212ENST00000590260 TMEM220Q6QAJ8 160 aa17.94■□□□□ 0.46
DDX39A-212ENST00000590260 BEND7Q8N7W2 519 aaPredicted RBP17.94■□□□□ 0.46
DDX39A-212ENST00000590260 GDAP1Q8TB36 358 aa17.94■□□□□ 0.46
DDX39A-212ENST00000590260 ZNF778Q96MU6 729 aa17.94■□□□□ 0.46
DDX39A-212ENST00000590260 SEMA6CQ9H3T2 930 aa17.94■□□□□ 0.46
DDX39A-212ENST00000590260 POLR1BQ9H9Y6 1135 aa17.94■□□□□ 0.46
DDX39A-212ENST00000590260 TMEM9Q9P0T7 183 aa17.94■□□□□ 0.46
DDX39A-212ENST00000590260 WDR37Q9Y2I8 494 aa17.94■□□□□ 0.46
DDX39A-212ENST00000590260 OR2AG2A6NM03 316 aa17.93■□□□□ 0.46
DDX39A-212ENST00000590260 ERI2A8K979 691 aaKnown RBP17.93■□□□□ 0.46
DDX39A-212ENST00000590260 RHPN2P1A8MT19 583 aa17.93■□□□□ 0.46
DDX39A-212ENST00000590260 DXOO77932 396 aaKnown RBP17.93■□□□□ 0.46
DDX39A-212ENST00000590260 HOXB3P14651 431 aaPredicted RBP17.93■□□□□ 0.46
DDX39A-212ENST00000590260 CCKBRP32239 447 aa17.93■□□□□ 0.46
DDX39A-212ENST00000590260 MC4RP32245 332 aa17.93■□□□□ 0.46
DDX39A-212ENST00000590260 SLC19A1P41440 591 aa17.93■□□□□ 0.46
DDX39A-212ENST00000590260 LSSP48449 732 aa17.93■□□□□ 0.46
DDX39A-212ENST00000590260 AMZ1Q400G9 498 aa17.93■□□□□ 0.46
DDX39A-212ENST00000590260 USP53Q70EK8 1073 aa17.93■□□□□ 0.46
DDX39A-212ENST00000590260 ZNF534Q76KX8 674 aa17.93■□□□□ 0.46
DDX39A-212ENST00000590260 TRAPPC5Q8IUR0 188 aa17.93■□□□□ 0.46
DDX39A-212ENST00000590260 PIANPQ8IYJ0 282 aa17.93■□□□□ 0.46
DDX39A-212ENST00000590260 SGF29Q96ES7 293 aa17.93■□□□□ 0.46
DDX39A-212ENST00000590260 LIN37Q96GY3 246 aaPredicted RBP17.93■□□□□ 0.46
DDX39A-212ENST00000590260 CDKN2AIPNLQ96HQ2 116 aa17.93■□□□□ 0.46
DDX39A-212ENST00000590260 OSGEPL1Q9H4B0 414 aa17.93■□□□□ 0.46
DDX39A-212ENST00000590260 PAK5Q9P286 719 aa17.93■□□□□ 0.46
DDX39A-212ENST00000590260 SLC2A6Q9UGQ3 507 aa17.93■□□□□ 0.46
DDX39A-212ENST00000590260 TTC7AQ9ULT0 858 aaPredicted RBP17.93■□□□□ 0.46
DDX39A-212ENST00000590260 IGLV3-16A0A075B6K0 115 aa17.92■□□□□ 0.46
DDX39A-212ENST00000590260 TCRBV7S3A2A0A539 114 aa17.92■□□□□ 0.46
DDX39A-212ENST00000590260 OR51F1A6NGY5 319 aa17.92■□□□□ 0.46
DDX39A-212ENST00000590260 FANCGO15287 622 aa17.92■□□□□ 0.46
DDX39A-212ENST00000590260 POP7O75817 140 aaKnown RBP17.92■□□□□ 0.46
DDX39A-212ENST00000590260 RPL10P27635 214 aaKnown RBP17.92■□□□□ 0.46
DDX39A-212ENST00000590260 GPR3P46089 330 aa17.92■□□□□ 0.46
DDX39A-212ENST00000590260 DRG2P55039 364 aaKnown RBP17.92■□□□□ 0.46
DDX39A-212ENST00000590260 INHBCP55103 352 aa17.92■□□□□ 0.46
DDX39A-212ENST00000590260 DMPKQ09013 629 aa17.92■□□□□ 0.46
DDX39A-212ENST00000590260 CDH17Q12864 832 aa17.92■□□□□ 0.46
DDX39A-212ENST00000590260 SQSTM1Q13501 440 aa17.92■□□□□ 0.46
DDX39A-212ENST00000590260 SEPT6Q14141 434 aa17.92■□□□□ 0.46
DDX39A-212ENST00000590260 CLCA4Q14CN2 919 aa17.92■□□□□ 0.46
DDX39A-212ENST00000590260 SEPT7Q16181 437 aaKnown RBP17.92■□□□□ 0.46
DDX39A-212ENST00000590260 TBC1D25Q3MII6 688 aa17.92■□□□□ 0.46
DDX39A-212ENST00000590260 ZNF658BQ4V348 819 aaPredicted RBP17.92■□□□□ 0.46
DDX39A-212ENST00000590260 ABRAXAS1Q6UWZ7 409 aa17.92■□□□□ 0.46
DDX39A-212ENST00000590260 DET1Q7L5Y6 550 aa17.92■□□□□ 0.46
DDX39A-212ENST00000590260 LINC00523Q86TU6 105 aa17.92■□□□□ 0.46
DDX39A-212ENST00000590260 NXPE1Q8N323 547 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms