RNA–Protein interactions for RNA: ENST00000589742.5

RFX2-215, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-215	ENST00000589742	SOX13	Q9UN79	622 aa		11.77	□□□□□ -0.53
RFX2-215	ENST00000589742	DNAJC16	Q9Y2G8	782 aa		11.77	□□□□□ -0.53
RFX2-215	ENST00000589742	MRFAP1	Q9Y605	127 aa		11.77	□□□□□ -0.53
RFX2-215	ENST00000589742		U3KQA8	63 aa		11.77	□□□□□ -0.53
RFX2-215	ENST00000589742	PLXNB3	Q9ULL4	1909 aa		11.77	□□□□□ -0.53
RFX2-215	ENST00000589742	TRBV5-4	A0A0C4DH59	114 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	CPED1	A4D0V7	1026 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	SDR42E2	A6NKP2	422 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	OR2AG2	A6NM03	316 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742		B4DGG1	531 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	SNX2	O60749	519 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	FTH1P19	P0C7X4	201 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	MLN	P12872	115 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	CKMT2	P17540	419 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	ACVR1	Q04771	509 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	DHX9	Q08211	1270 aa	Known RBP	11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	DBN1	Q16643	649 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	GPR33	Q49SQ1	333 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	MSS51	Q4VC12	460 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	HIBCH	Q6NVY1	386 aa	Predicted RBP	11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	ZCCHC8	Q6NZY4	707 aa	Known RBP	11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	LVRN	Q6Q4G3	990 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	NLRP9	Q7RTR0	991 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	MAATS1	Q7Z4T9	603 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	GLRX5	Q86SX6	157 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	LDB1	Q86U70	411 aa	Predicted RBP	11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	LRRTM4	Q86VH4	590 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	TRAPPC5	Q8IUR0	188 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	NXPE1	Q8N323	547 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	SDR16C5	Q8N3Y7	309 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	BEND7	Q8N7W2	519 aa	Predicted RBP	11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	FAM181A	Q8N9Y4	354 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	KY	Q8NBH2	561 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	ZDHHC1	Q8WTX9	485 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	ULK4	Q96C45	1275 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	DCUN1D1	Q96GG9	259 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	SNF8	Q96H20	258 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	SIGLEC10	Q96LC7	697 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	FCRL3	Q96P31	734 aa	Predicted RBP	11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	BOC	Q9BWV1	1114 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	KLC4	Q9NSK0	619 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	TREX1	Q9NSU2	369 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	ZDHHC3	Q9NYG2	299 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	ANAPC5	Q9UJX4	755 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	MAD1L1	Q9Y6D9	718 aa		11.76	□□□□□ -0.53
RFX2-215	ENST00000589742	RP1	P56715	2156 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	KNTC1	P50748	2209 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	GOLGA8K	D6RF30	607 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	GOLGA8T	H3BQL2	631 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	KMO	O15229	486 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	TP73	O15350	636 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	NOBOX	O60393	691 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	POP7	O75817	140 aa	Known RBP	11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	VAPB	O95292	243 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	EML2	O95834	649 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	CKMT1A	P12532	417 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	ZNF7	P17097	686 aa	Predicted RBP	11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	ACRV1	P26436	265 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	PBLD	P30039	288 aa	Predicted RBP	11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	MAGEA3	P43357	314 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	ACADVL	P49748	655 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	MAZ	P56270	477 aa	Known RBP	11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	CLDN6	P56747	220 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	SLC7A5	Q01650	507 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	SEMA3A	Q14563	771 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	MORF4L2	Q15014	288 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	NR0B2	Q15466	257 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	TRADD	Q15628	312 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	INSC	Q1MX18	579 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	BBS9	Q3SYG4	887 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	ANKRD20A4	Q4UJ75	823 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	DUPD1	Q68J44	220 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	GUSBP11	Q6P575	273 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	OGFOD3	Q6PK18	319 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	AFTPH	Q6ULP2	937 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	C11orf96	Q7Z7L8	435 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	HOOK3	Q86VS8	718 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	GPR156	Q8NFN8	814 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	OR4L1	Q8NH43	312 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	PEX13	Q92968	403 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	GLMN	Q92990	594 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	ZNF669	Q96BR6	464 aa	Predicted RBP	11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	COPS8	Q99627	209 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	ERP44	Q9BS26	406 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	ZCCHC2	Q9C0B9	1178 aa	Known RBP	11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	OSGEPL1	Q9H4B0	414 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	MRM3	Q9HC36	420 aa	Known RBP	11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	IL1RAPL1	Q9NZN1	696 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	SAMD15	Q9P1V8	674 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	MARCH4	Q9P2E8	410 aa	Predicted RBP	11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	FAM8A1	Q9UBU6	413 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	TBC1D29	Q9UFV1	150 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	PADI4	Q9UM07	663 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	PRSS21	Q9Y6M0	314 aa		11.75	□□□□□ -0.53
RFX2-215	ENST00000589742	ZNF106	Q9H2Y7	1883 aa	Known RBP	11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	FAM237B	A0A1B0GVD1	139 aa		11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	MAGEB16	A2A368	324 aa		11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	GPR89A	B7ZAQ6	455 aa		11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	CASC3	O15234	703 aa	Known RBP	11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms