RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 MRPL57Q9BQC6 102 aaKnown RBP10.46□□□□□ -0.74
NEDD4L-224ENST00000588712 SLC17A9Q9BYT1 436 aa10.46□□□□□ -0.74
NEDD4L-224ENST00000588712 CCDC134Q9H6E4 229 aa10.46□□□□□ -0.74
NEDD4L-224ENST00000588712 TBC1D17Q9HA65 648 aa10.46□□□□□ -0.74
NEDD4L-224ENST00000588712 SPATS2LQ9NUQ6 558 aaKnown RBP10.46□□□□□ -0.74
NEDD4L-224ENST00000588712 RUVBL2Q9Y230 463 aaKnown RBP10.46□□□□□ -0.74
NEDD4L-224ENST00000588712 DHRS7Q9Y394 339 aa10.46□□□□□ -0.74
NEDD4L-224ENST00000588712 ATG2BQ96BY7 2078 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 KLHL33A6NCF5 533 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 TOR1BO14657 336 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 PHGDHO43175 533 aaKnown RBP10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 RNGTTO60942 597 aaKnown RBP10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 CCDC166P0CW27 439 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 CBSLP0DN79 551 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 DGKAP23743 735 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 CBSP35520 551 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 ETV4P43268 484 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 PRKAA2P54646 552 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 GYS2P54840 703 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 GUCY1A3Q02108 690 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 FZD5Q13467 585 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 GTF2H3Q13889 308 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 TMEM259Q4ZIN3 620 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 N4BP2L1Q5TBK1 243 aaPredicted RBP10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 TRIM69Q86WT6 500 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 CACUL1Q86Y37 369 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 CCDC63Q8NA47 563 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 ACVR1CQ8NER5 493 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 PJA1Q8NG27 643 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 MGARPQ8TDB4 240 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 HMGB4Q8WW32 186 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 ERLEC1Q96DZ1 483 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 CCDC126Q96EE4 140 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 PDLIM5Q96HC4 596 aaKnown RBP10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 HIC2Q96JB3 615 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 LENG8Q96PV6 779 aaPredicted RBP10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 FAM111AQ96PZ2 611 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 CHRDQ9H2X0 955 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 TRIM39Q9HCM9 518 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 USP36Q9P275 1121 aaKnown RBP10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 SERGEFQ9UGK8 458 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 SIT1Q9Y3P8 196 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 PLXNA2O75051 1894 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 A0A1W2PQU0 124 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 FADS2P1A8MWK0 482 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 PLIN3O60664 434 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 SHOX2O60902 331 aaPredicted RBP10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 DHRS4L1P0CG22 281 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 NEFHP12036 1026 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 ZNF37AP17032 561 aaPredicted RBP10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 TAC1P20366 129 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 GNGT1P63211 74 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 PLOD1Q02809 727 aaPredicted RBP10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 TMEM115Q12893 351 aaPredicted RBP10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 CTSL3PQ5NE16 218 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 MAMSTRQ6ZN01 415 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 Q6ZS52 159 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 TRIM67Q6ZTA4 783 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 OTOAQ7RTW8 1153 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 DENND6BQ8NEG7 585 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 RHEBL1Q8TAI7 183 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 CKAP2Q8WWK9 683 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 SCYL1Q96KG9 808 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 GPR21Q99679 349 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 C1QTNF1Q9BXJ1 281 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 DERL2Q9GZP9 239 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 MRPL46Q9H2W6 279 aaKnown RBP10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 GPR34Q9UPC5 381 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 COQ6Q9Y2Z9 468 aa10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 MTF2Q9Y483 593 aaPredicted RBP10.45□□□□□ -0.74
NEDD4L-224ENST00000588712 H2AFYO75367 372 aaKnown RBP10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 WISP3O95389 354 aaPredicted RBP10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 APBB3O95704 486 aa10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 F7P08709 466 aaPredicted RBP10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 ENO3P13929 434 aaPredicted RBP10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 CPA3P15088 417 aa10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 TRIM23P36406 574 aa10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 MAPK9P45984 424 aa10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 SERPINB4P48594 390 aa10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 CCR3P51677 355 aa10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 CLCN7P51798 805 aa10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 WDR4P57081 412 aaKnown RBP10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 ZXDAP98168 799 aa10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 CSHL1Q14406 222 aa10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 PDK4Q16654 411 aa10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 RGS9BPQ6ZS82 235 aa10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 CDHR3Q6ZTQ4 885 aa10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 STAG3L4Q8TBR4 150 aa10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 BOCQ9BWV1 1114 aa10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 TFB2MQ9H5Q4 396 aaKnown RBP10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 PHPT1Q9NRX4 125 aaPredicted RBP10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 TMEM216Q9P0N5 145 aa10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 SLC17A7Q9P2U7 560 aa10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 TMCO1Q9UM00 188 aa10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 DNMT3AQ9Y6K1 912 aaPredicted RBP10.44□□□□□ -0.74
NEDD4L-224ENST00000588712 SYCE1LA8MT33 242 aa10.43□□□□□ -0.74
NEDD4L-224ENST00000588712 KLF11O14901 512 aa10.43□□□□□ -0.74
NEDD4L-224ENST00000588712 GPR39O43194 453 aa10.43□□□□□ -0.74
NEDD4L-224ENST00000588712 NIPSNAP2O75323 286 aa10.43□□□□□ -0.74
NEDD4L-224ENST00000588712 CDK14O94921 469 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms