RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 ASB2Q96Q27 587 aa6.13□□□□□ -1.43
LIG3-206ENST00000586058 GPR21Q99679 349 aa6.13□□□□□ -1.43
LIG3-206ENST00000586058 GABRG3Q99928 467 aa6.13□□□□□ -1.43
LIG3-206ENST00000586058 MCMBPQ9BTE3 642 aa6.13□□□□□ -1.43
LIG3-206ENST00000586058 RPP25Q9BUL9 199 aaKnown RBP6.13□□□□□ -1.43
LIG3-206ENST00000586058 FAM126AQ9BYI3 521 aaPredicted RBP6.13□□□□□ -1.43
LIG3-206ENST00000586058 TRIM54Q9BYV2 358 aa6.13□□□□□ -1.43
LIG3-206ENST00000586058 TRIM55Q9BYV6 548 aa6.13□□□□□ -1.43
LIG3-206ENST00000586058 MTG2Q9H4K7 406 aa6.13□□□□□ -1.43
LIG3-206ENST00000586058 EML4Q9HC35 981 aaKnown RBP6.13□□□□□ -1.43
LIG3-206ENST00000586058 PREBQ9HCU5 417 aa6.13□□□□□ -1.43
LIG3-206ENST00000586058 IL26Q9NPH9 171 aa6.13□□□□□ -1.43
LIG3-206ENST00000586058 LATS2Q9NRM7 1088 aa6.13□□□□□ -1.43
LIG3-206ENST00000586058 SPATS2LQ9NUQ6 558 aaKnown RBP6.13□□□□□ -1.43
LIG3-206ENST00000586058 FGFR1OP2Q9NVK5 253 aa6.13□□□□□ -1.43
LIG3-206ENST00000586058 KLHL14Q9P2G3 628 aa6.13□□□□□ -1.43
LIG3-206ENST00000586058 CPSF2Q9P2I0 782 aaKnown RBP6.13□□□□□ -1.43
LIG3-206ENST00000586058 CD84Q9UIB8 345 aa6.13□□□□□ -1.43
LIG3-206ENST00000586058 FZD4Q9ULV1 537 aa6.13□□□□□ -1.43
LIG3-206ENST00000586058 NDRG2Q9UN36 371 aaKnown RBP6.13□□□□□ -1.43
LIG3-206ENST00000586058 DUSP12Q9UNI6 340 aa6.13□□□□□ -1.43
LIG3-206ENST00000586058 STK38LQ9Y2H1 464 aa6.13□□□□□ -1.43
LIG3-206ENST00000586058 A0A1W2PP55 124 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 TCRBV21S2A2A0A5A6 115 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 HMX2A2RU54 273 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 KLHL33A6NCF5 533 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 LRRC72A6NJI9 287 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 K7EQS6 105 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 BTN3A1O00481 513 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 RAD51BO15315 384 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 NIPSNAP2O75323 286 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 DCTN3O75935 186 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 RECQL5O94762 991 aaPredicted RBP6.12□□□□□ -1.43
LIG3-206ENST00000586058 PCCBP05166 539 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 ASGR2P07307 311 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 HIST1H2AGP0C0S8 130 aaPredicted RBP6.12□□□□□ -1.43
LIG3-206ENST00000586058 DHRS4L1P0CG22 281 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 ATP1B2P14415 290 aaPredicted RBP6.12□□□□□ -1.43
LIG3-206ENST00000586058 VCLP18206 1134 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 HIST1H2ADP20671 130 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 CYP2A7P20853 494 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 BGNP21810 368 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 ATP5F1P24539 256 aaPredicted RBP6.12□□□□□ -1.43
LIG3-206ENST00000586058 MAP4P27816 1152 aaKnown RBP6.12□□□□□ -1.43
LIG3-206ENST00000586058 GABRB3P28472 473 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 ARL1P40616 181 aaPredicted RBP6.12□□□□□ -1.43
LIG3-206ENST00000586058 ETV4P43268 484 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 KIR2DL1P43626 348 aaPredicted RBP6.12□□□□□ -1.43
LIG3-206ENST00000586058 DGKEP52429 567 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 WDR4P57081 412 aaKnown RBP6.12□□□□□ -1.43
LIG3-206ENST00000586058 RPS21P63220 83 aaKnown RBP6.12□□□□□ -1.43
LIG3-206ENST00000586058 SEMG2Q02383 582 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 PTSQ03393 145 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 RALGDSQ12967 914 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 ENPP2Q13822 863 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 BOP1Q14137 746 aaKnown RBP6.12□□□□□ -1.43
LIG3-206ENST00000586058 ZNF460Q14592 562 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 PCLAFQ15004 111 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 ATP13A5Q4VNC0 1218 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 SLC44A4Q53GD3 710 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 TECRLQ5HYJ1 363 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 PPM1JQ5JR12 505 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 HABP4Q5JVS0 413 aaKnown RBP6.12□□□□□ -1.43
LIG3-206ENST00000586058 GPRC6AQ5T6X5 926 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 HENMT1Q5T8I9 393 aaKnown RBP6.12□□□□□ -1.43
LIG3-206ENST00000586058 TXNDC11Q6PKC3 985 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.12□□□□□ -1.43
LIG3-206ENST00000586058 ZYG11AQ6WRX3 759 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 MACC1Q6ZN28 852 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 Q6ZVL8 140 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 USP30Q70CQ3 517 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 Q7L0L9 218 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 PIWIL4Q7Z3Z4 852 aaKnown RBP6.12□□□□□ -1.43
LIG3-206ENST00000586058 SPATA21Q7Z572 469 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 HSD11B1LQ7Z5J1 315 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 CLEC14AQ86T13 490 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 PIM3Q86V86 326 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 TMPRSS6Q8IU80 811 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 CEP97Q8IW35 865 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 ADHFE1Q8IWW8 467 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 LRRC34Q8IZ02 419 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 FSTL5Q8N475 847 aaPredicted RBP6.12□□□□□ -1.43
LIG3-206ENST00000586058 ZBTB2Q8N680 514 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 IL17RCQ8NAC3 791 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 SIDT2Q8NBJ9 832 aaKnown RBP6.12□□□□□ -1.43
LIG3-206ENST00000586058 OR14C36Q8NHC7 312 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 MAFAQ8NHW3 353 aaPredicted RBP6.12□□□□□ -1.43
LIG3-206ENST00000586058 RHEBL1Q8TAI7 183 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 DENND1AQ8TEH3 1009 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 ASZ1Q8WWH4 475 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 ELMO1Q92556 727 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 ZNF75CPQ92670 426 aaPredicted RBP6.12□□□□□ -1.43
LIG3-206ENST00000586058 INPP5DQ92835 1189 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 GLYATL1Q969I3 302 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 TMEM159Q96B96 161 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 NXNL1Q96CM4 212 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 HIST1H2AHQ96KK5 128 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 NSMCE3Q96MG7 304 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 C7orf26Q96N11 449 aa6.12□□□□□ -1.43
LIG3-206ENST00000586058 SMIM14Q96QK8 99 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms