RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 PIANPQ8IYJ0 282 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 CHST14Q8NCH0 376 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 STAG3L4Q8TBR4 150 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 CYB5D2Q8WUJ1 264 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 OR8D1Q8WZ84 308 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 INPP5DQ92835 1189 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 KIAA1191Q96A73 305 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 VOPP1Q96AW1 172 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 EID2BQ96D98 161 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 FAR2Q96K12 515 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 ZFYVE19Q96K21 471 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 BIRC8Q96P09 236 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 SMIM14Q96QK8 99 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 TRMOQ9BU70 441 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 P2RY12Q9H244 342 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 KCNK13Q9HB14 408 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 EML4Q9HC35 981 aaKnown RBP10.3□□□□□ -0.76
LIG3-203ENST00000585370 HPS4Q9NQG7 708 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 SAR1AQ9NR31 198 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 LATS2Q9NRM7 1088 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 DNAJC28Q9NX36 388 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 CPSF2Q9P2I0 782 aaKnown RBP10.3□□□□□ -0.76
LIG3-203ENST00000585370 XPR1Q9UBH6 696 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 CRLS1Q9UJA2 301 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 TRMT6Q9UJA5 497 aaKnown RBP10.3□□□□□ -0.76
LIG3-203ENST00000585370 GNPTGQ9UJJ9 305 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 HAO1Q9UJM8 370 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 DNAJC16Q9Y2G8 782 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 DHRS7Q9Y394 339 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 RAP2CQ9Y3L5 183 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 WASF2Q9Y6W5 498 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 LAMA1P25391 3075 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 ANKRD36A6QL64 1941 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 A0A0G2JND7 137 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 NPIPB15A6NHN6 443 aaPredicted RBP10.29□□□□□ -0.76
LIG3-203ENST00000585370 E5RI56 91 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 TK2O00142 265 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 PSMD11O00231 422 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 TIMP2P16035 220 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 ALOX15P16050 662 aaPredicted RBP10.29□□□□□ -0.76
LIG3-203ENST00000585370 TFEBP19484 476 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 CHRM3P20309 590 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 IMPDH1P20839 514 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 ACRV1P26436 265 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 GRIA2P42262 883 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 SLC6A11P48066 632 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 GLRBP48167 497 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 SPINT3P49223 89 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 RASSF2P50749 326 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 CCR3P51677 355 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 DCDC1P59894 354 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 IL2P60568 153 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 NFKB2Q00653 900 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 TIAL1Q01085 375 aaKnown RBP eCLIP10.29□□□□□ -0.76
LIG3-203ENST00000585370 SATB1Q01826 763 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 PTSQ03393 145 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 BNIP1Q12981 228 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 ZNF460Q14592 562 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 TBCCQ15814 346 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 GAB4Q2WGN9 574 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 HNRNPA1L2Q32P51 320 aaKnown RBP10.29□□□□□ -0.76
LIG3-203ENST00000585370 ITPRIPL2Q3MIP1 535 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 FNDC3BQ53EP0 1204 aaKnown RBP10.29□□□□□ -0.76
LIG3-203ENST00000585370 METTL21CQ5VZV1 264 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 FAM91A1Q658Y4 838 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 LRRC66Q68CR7 880 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 PTRHD1Q6GMV3 140 aaKnown RBP10.29□□□□□ -0.76
LIG3-203ENST00000585370 ERAP2Q6P179 960 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 TXNDC11Q6PKC3 985 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 MACC1Q6ZN28 852 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 ZCCHC23Q6ZST2 131 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 DPPA4Q7L190 304 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 TTC7BQ86TV6 843 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 SERPINA9Q86WD7 417 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 C12orf40Q86WS4 652 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 ZSWIM9Q86XI8 627 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 NRSN1Q8IZ57 195 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 NXPE1Q8N323 547 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 AFAP1L2Q8N4X5 818 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 FITM2Q8N6M3 262 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 TERB1Q8NA31 727 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 RFWD2Q8NHY2 731 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 CSGALNACT1Q8TDX6 532 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 PPP1R16AQ96I34 528 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 IER2Q9BTL4 223 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 TMEM120AQ9BXJ8 343 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 PARD6AQ9NPB6 346 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 TXLNGQ9NUQ3 528 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 C2orf42Q9NWW7 574 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 ZDHHC3Q9NYG2 299 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 GTSE1Q9NYZ3 720 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 B4GALT6Q9UBX8 382 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 DCTN4Q9UJW0 460 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 ACACBO00763 2458 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 MYOFQ9NZM1 2061 aa10.29□□□□□ -0.76
LIG3-203ENST00000585370 TBC1D3BA6NDS4 549 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 PRRT4C9JH25 899 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 EIF3FO00303 357 aaPredicted RBP10.28□□□□□ -0.76
LIG3-203ENST00000585370 QSOX1O00391 747 aa10.28□□□□□ -0.76
LIG3-203ENST00000585370 GAPDHSO14556 408 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms