RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SP110Q9HB58 689 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 EPB41L5Q9HCM4 733 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 FGF22Q9HCT0 170 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 THSD1Q9NS62 852 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 PARVAQ9NVD7 372 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 ETNK2Q9NVF9 386 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 ERVK13-1Q9NX77 482 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 NCKIPSDQ9NZQ3 722 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 CWC15Q9P013 229 aaKnown RBP6.23□□□□□ -1.41
NUP88-212ENST00000576708 B4GALT6Q9UBX8 382 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 KLQ9UEF7 1012 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 CNOT8Q9UFF9 292 aaKnown RBP6.23□□□□□ -1.41
NUP88-212ENST00000576708 ADGRE2Q9UHX3 823 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 MOSPD1Q9UJG1 213 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 ZNF281Q9Y2X9 895 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 ASXL3Q9C0F0 2248 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 CCDC187A0A096LP49 1063 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 TMEM110-MUSTN1A8MSY1 372 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 CDRT15L2A8MXV6 281 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 B4DGG1 531 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 TRAFD1O14545 582 aaPredicted RBP6.22□□□□□ -1.41
NUP88-212ENST00000576708 TOR1BO14657 336 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 PRPSAP2O60256 369 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 NOBOXO60393 691 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 TCEA3O75764 348 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 PEX11BO96011 259 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 FUCA1P04066 466 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 ALPIP09923 528 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 ELFN1P0C7U0 828 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 PLA2G2AP14555 144 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 HTR1BP28222 390 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 SERPINA4P29622 427 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 UGT1A5P35504 534 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 ETV5P41161 510 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 CSNK1DP48730 415 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 POLD2P49005 469 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 BLKP51451 505 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 MAXP61244 160 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 BCL2L1Q07817 233 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 IL10RBQ08334 325 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 TRAF2Q12933 501 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 MTM1Q13496 603 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 DPYSQ14117 519 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 ACOX1Q15067 660 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 PRSS53Q2L4Q9 553 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 SMTNL2Q2TAL5 461 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 ZSCAN23Q3MJ62 389 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 FAM182AQ5T1J6 154 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 CCDC183Q5T5S1 534 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 TXNRD3NBQ6F5E7 133 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 BRAT1Q6PJG6 821 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 RFLNAQ6ZTI6 216 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 DPPA4Q7L190 304 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 TMPRSS9Q7Z410 1059 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 HSD11B1LQ7Z5J1 315 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 TAF8Q7Z7C8 310 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 GKN2Q86XP6 184 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 CPNE8Q86YQ8 564 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 JAMLQ86YT9 394 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 FBXO39Q8N4B4 442 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 TMEM52Q8NDY8 209 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 FAM46DQ8NEK8 389 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 GPR156Q8NFN8 814 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 OR56A4Q8NGH8 313 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 WDR36Q8NI36 951 aaKnown RBP6.22□□□□□ -1.41
NUP88-212ENST00000576708 PDCD6IPQ8WUM4 868 aaKnown RBP6.22□□□□□ -1.41
NUP88-212ENST00000576708 HSPH1Q92598 858 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 NAT6Q93015 286 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 ZNF653Q96CK0 615 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 MAP6Q96JE9 813 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 GBP4Q96PP9 640 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 GFM1Q96RP9 751 aaKnown RBP6.22□□□□□ -1.41
NUP88-212ENST00000576708 TUBGCP5Q96RT8 1024 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 RBM15Q96T37 977 aaKnown RBP eCLIP6.22□□□□□ -1.41
NUP88-212ENST00000576708 LRRN3Q9H3W5 708 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 ZWILCHQ9H900 591 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 PLEKHM1Q9Y4G2 1056 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 PCDHGA8Q9Y5G5 932 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 RNF215Q9Y6U7 377 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 ANKRD36A6QL64 1941 aa6.22□□□□□ -1.41
NUP88-212ENST00000576708 FASNP49327 2511 aaKnown RBP6.22□□□□□ -1.41
NUP88-212ENST00000576708 LRP4O75096 1905 aa6.21□□□□□ -1.41
NUP88-212ENST00000576708 D6RAR5 112 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 CACNB4O00305 520 aaPredicted RBP6.21□□□□□ -1.42
NUP88-212ENST00000576708 PLD2O14939 933 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 B4GAT1O43505 415 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 RNF8O76064 485 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 CPP00450 1065 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 CCDC172P0C7W6 258 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 DESP17661 470 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 CTPS1P17812 591 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 ITIH1P19827 911 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 CR2P20023 1033 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 LHCGRP22888 699 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 AK4P27144 223 aaPredicted RBP6.21□□□□□ -1.42
NUP88-212ENST00000576708 SLC5A2P31639 672 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 HTR7P34969 479 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 ANP32AP39687 249 aaKnown RBP6.21□□□□□ -1.42
NUP88-212ENST00000576708 GDNFP39905 211 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 ECI1P42126 302 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms