RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 DBN1Q16643 649 aa16.06■□□□□ 0.16
PFN1-203ENST00000574872 ANKRD20A4Q4UJ75 823 aa16.06■□□□□ 0.16
PFN1-203ENST00000574872 FASTKD1Q53R41 847 aaKnown RBP16.06■□□□□ 0.16
PFN1-203ENST00000574872 SLC30A9Q6PML9 568 aa16.06■□□□□ 0.16
PFN1-203ENST00000574872 DBX2Q6ZNG2 339 aa16.06■□□□□ 0.16
PFN1-203ENST00000574872 CHST15Q7LFX5 561 aaPredicted RBP16.06■□□□□ 0.16
PFN1-203ENST00000574872 LDB1Q86U70 411 aaPredicted RBP16.06■□□□□ 0.16
PFN1-203ENST00000574872 IGDCC3Q8IVU1 814 aa16.06■□□□□ 0.16
PFN1-203ENST00000574872 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.06■□□□□ 0.16
PFN1-203ENST00000574872 CFAP36Q96G28 342 aa16.06■□□□□ 0.16
PFN1-203ENST00000574872 DCUN1D1Q96GG9 259 aa16.06■□□□□ 0.16
PFN1-203ENST00000574872 COPS8Q99627 209 aa16.06■□□□□ 0.16
PFN1-203ENST00000574872 BOCQ9BWV1 1114 aa16.06■□□□□ 0.16
PFN1-203ENST00000574872 RMI1Q9H9A7 625 aa16.06■□□□□ 0.16
PFN1-203ENST00000574872 CATSPERZQ9NTU4 200 aa16.06■□□□□ 0.16
PFN1-203ENST00000574872 ZDHHC3Q9NYG2 299 aa16.06■□□□□ 0.16
PFN1-203ENST00000574872 MARCH4Q9P2E8 410 aaPredicted RBP16.06■□□□□ 0.16
PFN1-203ENST00000574872 DMGDHQ9UI17 866 aaKnown RBP16.06■□□□□ 0.16
PFN1-203ENST00000574872 PCOLCE2Q9UKZ9 415 aa16.06■□□□□ 0.16
PFN1-203ENST00000574872 CHMP2BQ9UQN3 213 aa16.06■□□□□ 0.16
PFN1-203ENST00000574872 ST14Q9Y5Y6 855 aa16.06■□□□□ 0.16
PFN1-203ENST00000574872 ARID1BQ8NFD5 2236 aaPredicted RBP16.05■□□□□ 0.16
PFN1-203ENST00000574872 MAGEB16A2A368 324 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 DCDC2BA2VCK2 349 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 LMO7DNF2Z398 122 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 TM4SF5O14894 197 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 SIGLEC6O43699 453 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 GIMD1P0DJR0 217 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 MYF5P13349 255 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 PGAM1P18669 254 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 PAMP19021 973 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 ELK3P41970 407 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 PDIA2Q13087 525 aaKnown RBP16.05■□□□□ 0.16
PFN1-203ENST00000574872 KIAA0930Q6ICG6 404 aaPredicted RBP16.05■□□□□ 0.16
PFN1-203ENST00000574872 TMEM220Q6QAJ8 160 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 PIP4P1Q86T03 277 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 LRRTM4Q86VH4 590 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 GKN2Q86XP6 184 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 NRROSQ86YC3 692 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 ANKMY2Q8IV38 441 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 ZNF547Q8IVP9 402 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 BEND7Q8N7W2 519 aaPredicted RBP16.05■□□□□ 0.16
PFN1-203ENST00000574872 SGF29Q96ES7 293 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 EBNA1BP2Q99848 306 aaKnown RBP16.05■□□□□ 0.16
PFN1-203ENST00000574872 WDR83Q9BRX9 315 aaKnown RBP16.05■□□□□ 0.16
PFN1-203ENST00000574872 GSDMCQ9BYG8 508 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 L2HGDHQ9H9P8 463 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 EPB41L5Q9HCM4 733 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 TRNAU1APQ9NX07 287 aaKnown RBP16.05■□□□□ 0.16
PFN1-203ENST00000574872 NLGN3Q9NZ94 848 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 SIRPGQ9P1W8 387 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 KCNK6Q9Y257 313 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 CSNK1G3Q9Y6M4 447 aa16.05■□□□□ 0.16
PFN1-203ENST00000574872 CNOT1A5YKK6 2376 aaKnown RBP16.05■□□□□ 0.16
PFN1-203ENST00000574872 ZCWPW2A0A1B0GU75 182 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 GPR89AB7ZAQ6 455 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 CFAP99D6REC4 459 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 CHUKO15111 745 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 CD3EAPO15446 510 aaKnown RBP16.04■□□□□ 0.16
PFN1-203ENST00000574872 USP1O94782 785 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 GPR89BP0CG08 455 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 ALPPL2P10696 532 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 RALBP11234 206 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 PBLDP30039 288 aaPredicted RBP16.04■□□□□ 0.16
PFN1-203ENST00000574872 ACTR1BP42025 376 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 ACTR1AP61163 376 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 CRYMQ14894 314 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 FASTKD3Q14CZ7 662 aaKnown RBP16.04■□□□□ 0.16
PFN1-203ENST00000574872 INSCQ1MX18 579 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 ARMC3Q5W041 872 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 ZDHHC24Q6UX98 284 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 TMEM135Q86UB9 458 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 SFTPA2Q8IWL1 248 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 FAM46DQ8NEK8 389 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 OR4C6Q8NH72 309 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 FBXO25Q8TCJ0 367 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 GPBAR1Q8TDU6 330 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 ART4Q93070 314 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 RTKNQ9BST9 563 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 FAM8A1Q9UBU6 413 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 FTSJ1Q9UET6 329 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 SLC23A2Q9UGH3 650 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 GPR34Q9UPC5 381 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 DNAJC16Q9Y2G8 782 aa16.04■□□□□ 0.16
PFN1-203ENST00000574872 GOLGA4Q13439 2230 aaKnown RBP16.03■□□□□ 0.16
PFN1-203ENST00000574872 B4DGG1 531 aa16.03■□□□□ 0.16
PFN1-203ENST00000574872 GIPC1O14908 333 aa16.03■□□□□ 0.16
PFN1-203ENST00000574872 OR1I1O60431 355 aa16.03■□□□□ 0.16
PFN1-203ENST00000574872 CBFA2T3O75081 653 aa16.03■□□□□ 0.16
PFN1-203ENST00000574872 POLBP06746 335 aa16.03■□□□□ 0.16
PFN1-203ENST00000574872 F7P08709 466 aaPredicted RBP16.03■□□□□ 0.16
PFN1-203ENST00000574872 RHOXF2BP0C7M4 288 aa16.03■□□□□ 0.16
PFN1-203ENST00000574872 SDHBP21912 280 aa16.03■□□□□ 0.16
PFN1-203ENST00000574872 ARCN1P48444 511 aaKnown RBP16.03■□□□□ 0.16
PFN1-203ENST00000574872 NOVA1P51513 510 aaKnown RBP16.03■□□□□ 0.16
PFN1-203ENST00000574872 LRP8Q14114 963 aa16.03■□□□□ 0.16
PFN1-203ENST00000574872 GLE1Q53GS7 698 aaKnown RBP16.03■□□□□ 0.16
PFN1-203ENST00000574872 CENPUQ71F23 418 aa16.03■□□□□ 0.16
PFN1-203ENST00000574872 CCDC25Q86WR0 208 aa16.03■□□□□ 0.16
PFN1-203ENST00000574872 ZBED8Q8IZ13 594 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms