RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 OR4D9Q8NGE8 314 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 NCSTNQ92542 709 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 SH3KBP1Q96B97 665 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 VPS35Q96QK1 796 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 APOL2Q9BQE5 337 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 SARS2Q9NP81 518 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 IL26Q9NPH9 171 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 FOXJ2Q9P0K8 574 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 CPNE7Q9UBL6 633 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 SLC23A2Q9UGH3 650 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 GUCA1BQ9UMX6 200 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 EFR3BQ9Y2G0 817 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 FAM208BQ5VWN6 2430 aa12.53□□□□□ -0.4
NPLOC4-213ENST00000573519 KIR2DS5A0A0G2JLQ3 304 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 A0A0G2JNG1 304 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 A6NCN8 305 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 GOLGA6L9A6NEM1 432 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 OR5K4A6NMS3 321 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 C9orf172C9J069 976 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 KIR2DS3K7RE56 304 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 CHUKO15111 745 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 STX7O15400 261 aaKnown RBP12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 DDX3YO15523 660 aaKnown RBP12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 GPR39O43194 453 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 UGT1A9O60656 530 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 THRAP10827 490 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 LIPCP11150 499 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 UGT1A6P19224 532 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 UGT1A1P22309 533 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 UGT1A4P22310 534 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 RPL10P27635 214 aaKnown RBP12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 PTPN7P35236 360 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 UGT1A3P35503 534 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 CFHR1Q03591 330 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 TMEM115Q12893 351 aaPredicted RBP12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 OLIG2Q13516 323 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 TRA2AQ13595 282 aaKnown RBP eCLIP12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 PTPRCAPQ14761 206 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 KIR2DS5Q14953 304 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 TGIF1Q15583 401 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 CHRNA6Q15825 494 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 KHDC1Q4VXA5 237 aaKnown RBP12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 TAF1BQ53T94 588 aaPredicted RBP12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 TMEM71Q6P5X7 295 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 ZFAND4Q86XD8 727 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 FAM129CQ86XR2 697 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 AGBL5Q8NDL9 886 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 CCDC112Q8NEF3 446 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 CCDC110Q8TBZ0 833 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 CCNL2Q96S94 520 aaPredicted RBP12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 DPYSL5Q9BPU6 564 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 TBC1D10AQ9BXI6 508 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 UGT1A7Q9HAW7 530 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 UGT1A10Q9HAW8 530 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 UGT1A8Q9HAW9 530 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 IL17CQ9P0M4 197 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 KLHL3Q9UH77 587 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 TMPRSS11EQ9UL52 423 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 AAR2Q9Y312 384 aaKnown RBP12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 PCDHB11Q9Y5F2 797 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 ARL5AQ9Y689 179 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 ZFYVE26Q68DK2 2539 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 KNTC1P50748 2209 aa12.52□□□□□ -0.41
NPLOC4-213ENST00000573519 EFCAB7A8K855 629 aa12.51□□□□□ -0.41
NPLOC4-213ENST00000573519 ATXN7O15265 892 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-213ENST00000573519 ARHGAP6O43182 974 aa12.51□□□□□ -0.41
NPLOC4-213ENST00000573519 VIPP01282 170 aa12.51□□□□□ -0.41
NPLOC4-213ENST00000573519 VCLP18206 1134 aa12.51□□□□□ -0.41
NPLOC4-213ENST00000573519 IDSP22304 550 aa12.51□□□□□ -0.41
NPLOC4-213ENST00000573519 AKT1P31749 480 aa12.51□□□□□ -0.41
NPLOC4-213ENST00000573519 DRG2P55039 364 aaKnown RBP12.51□□□□□ -0.41
NPLOC4-213ENST00000573519 ITGA9Q13797 1035 aa12.51□□□□□ -0.41
NPLOC4-213ENST00000573519 ZNF547Q8IVP9 402 aa12.51□□□□□ -0.41
NPLOC4-213ENST00000573519 LRRC8AQ8IWT6 810 aa12.51□□□□□ -0.41
NPLOC4-213ENST00000573519 AVL9Q8NBF6 648 aa12.51□□□□□ -0.41
NPLOC4-213ENST00000573519 BRSK1Q8TDC3 778 aa12.51□□□□□ -0.41
NPLOC4-213ENST00000573519 JPH3Q8WXH2 748 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-213ENST00000573519 SLC39A7Q92504 469 aa12.51□□□□□ -0.41
NPLOC4-213ENST00000573519 LRRC45Q96CN5 670 aa12.51□□□□□ -0.41
NPLOC4-213ENST00000573519 TAAR9Q96RI9 348 aa12.51□□□□□ -0.41
NPLOC4-213ENST00000573519 GORASP1Q9BQQ3 440 aa12.51□□□□□ -0.41
NPLOC4-213ENST00000573519 TIMM29Q9BSF4 260 aa12.51□□□□□ -0.41
NPLOC4-213ENST00000573519 ZCCHC2Q9C0B9 1178 aaKnown RBP12.51□□□□□ -0.41
NPLOC4-213ENST00000573519 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.51□□□□□ -0.419e-8■■□□□ 13.3
NPLOC4-213ENST00000573519 SCHIP1Q9P0W5 487 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-213ENST00000573519 TCRBV7S2A1N4TA0A589 114 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 OR2AG2A6NM03 316 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 C2orf81A6NN90 581 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 MIF4GDA9UHW6 222 aaKnown RBP12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 K7ENP7 123 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 PRAMEF1O95521 474 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 PRB1P04280 392 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 FGF3P11487 239 aaPredicted RBP12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 LPOP22079 712 aaPredicted RBP12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 PBLDP30039 288 aaPredicted RBP12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 CLCNKAP51800 687 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 EPHA4P54764 986 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 RHDQ02161 417 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 SRSF6Q13247 344 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms