RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 LTA4HP09960 611 aaKnown RBP13.53□□□□□ -0.24
CCDC40-209ENST00000573474 OR56A5P0C7T3 313 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 DHRS4L1P0CG22 281 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 CCDC166P0CW27 439 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 TEAD1P28347 426 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 GMPRP36959 345 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 RPS9P46781 194 aaKnown RBP13.53□□□□□ -0.24
CCDC40-209ENST00000573474 KPNA2P52292 529 aaKnown RBP13.53□□□□□ -0.24
CCDC40-209ENST00000573474 ZXDAP98168 799 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 WSCD2Q2TBF2 565 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 AGAP9Q5VTM2 703 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 TTC19Q6DKK2 380 aaPredicted RBP13.53□□□□□ -0.24
CCDC40-209ENST00000573474 PNCKQ6P2M8 343 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 C16orf46Q6P387 395 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 TMEM207Q6UWW9 146 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 ADAMTSL4Q6UY14 1074 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 TAX1BP1Q86VP1 789 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 PHYKPLQ8IUZ5 450 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 CENPLQ8N0S6 344 aaPredicted RBP13.53□□□□□ -0.24
CCDC40-209ENST00000573474 SPEM1Q8N4L4 309 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 CLDN19Q8N6F1 224 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 ARMC2Q8NEN0 867 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 PJA1Q8NG27 643 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 OR2T34Q8NGX1 318 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 KCTD4Q8WVF5 259 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 ASB12Q8WXK4 309 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 INPP5DQ92835 1189 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 NXNL1Q96CM4 212 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 SLC17A9Q9BYT1 436 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 BTBD1Q9H0C5 482 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 CHRDQ9H2X0 955 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 NMRAL1Q9HBL8 299 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 IGSF5Q9NSI5 407 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 ZNF358Q9NW07 568 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 TMEM216Q9P0N5 145 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 KLHL42Q9P2K6 505 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 EBF1Q9UH73 591 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 EMCNQ9ULC0 261 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 DHRS7Q9Y394 339 aa13.53□□□□□ -0.24
CCDC40-209ENST00000573474 PRR23AA6NEV1 266 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 IQCF5A8MTL0 148 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 K7ESM1 405 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 QSOX1O00391 747 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 INPP4BO15327 924 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 DNAJC6O75061 913 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 TRIM16O95361 564 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 PAK4O96013 591 aaPredicted RBP13.52□□□□□ -0.25
CCDC40-209ENST00000573474 PROCP04070 461 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 ZNF37AP17032 561 aaPredicted RBP13.52□□□□□ -0.25
CCDC40-209ENST00000573474 OXTRP30559 389 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 CLCN7P51798 805 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 GNGT1P63211 74 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 DLG1Q12959 904 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 FGL2Q14314 439 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 CSHL1Q14406 222 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 KLC3Q6P597 504 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 PAQR3Q6TCH7 311 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 PELI3Q8N2H9 469 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 NKAPQ8N5F7 415 aaKnown RBP13.52□□□□□ -0.25
CCDC40-209ENST00000573474 CCDC63Q8NA47 563 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 SIDT2Q8NBJ9 832 aaKnown RBP13.52□□□□□ -0.25
CCDC40-209ENST00000573474 CD200R1Q8TD46 325 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 ANKRD49Q8WVL7 239 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 CKAP2Q8WWK9 683 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 HIC2Q96JB3 615 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 GPR78Q96P69 363 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 PANX3Q96QZ0 392 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 TSSK1BQ9BXA7 367 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 ZCCHC2Q9C0B9 1178 aaKnown RBP13.52□□□□□ -0.25
CCDC40-209ENST00000573474 CCDC134Q9H6E4 229 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 SARS2Q9NP81 518 aaKnown RBP13.52□□□□□ -0.25
CCDC40-209ENST00000573474 CD320Q9NPF0 282 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 LATS2Q9NRM7 1088 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 SPATS2LQ9NUQ6 558 aaKnown RBP13.52□□□□□ -0.25
CCDC40-209ENST00000573474 C2orf42Q9NWW7 574 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 GALPQ9UBC7 116 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 SIT1Q9Y3P8 196 aa13.52□□□□□ -0.25
CCDC40-209ENST00000573474 BIRC5O15392 142 aa13.51□□□□□ -0.25
CCDC40-209ENST00000573474 MAGEC1O60732 1142 aa13.51□□□□□ -0.25
CCDC40-209ENST00000573474 SHOX2O60902 331 aaPredicted RBP13.51□□□□□ -0.25
CCDC40-209ENST00000573474 MTX2O75431 263 aa13.51□□□□□ -0.25
CCDC40-209ENST00000573474 APBB3O95704 486 aa13.51□□□□□ -0.25
CCDC40-209ENST00000573474 PCCBP05166 539 aa13.51□□□□□ -0.25
CCDC40-209ENST00000573474 RBP1P09455 135 aa13.51□□□□□ -0.25
CCDC40-209ENST00000573474 ACSL1P33121 698 aa13.51□□□□□ -0.25
CCDC40-209ENST00000573474 SERPINB4P48594 390 aa13.51□□□□□ -0.25
CCDC40-209ENST00000573474 IL2P60568 153 aa13.51□□□□□ -0.25
CCDC40-209ENST00000573474 TMEM115Q12893 351 aaPredicted RBP13.51□□□□□ -0.25
CCDC40-209ENST00000573474 ACAP2Q15057 778 aa13.51□□□□□ -0.25
CCDC40-209ENST00000573474 KHDC1Q4VXA5 237 aaKnown RBP13.51□□□□□ -0.25
CCDC40-209ENST00000573474 ANO7Q6IWH7 933 aa13.51□□□□□ -0.25
CCDC40-209ENST00000573474 LRRC8EQ6NSJ5 796 aa13.51□□□□□ -0.25
CCDC40-209ENST00000573474 DET1Q7L5Y6 550 aa13.51□□□□□ -0.25
CCDC40-209ENST00000573474 TRIM69Q86WT6 500 aa13.51□□□□□ -0.25
CCDC40-209ENST00000573474 SPATA6LQ8N4H0 392 aa13.51□□□□□ -0.25
CCDC40-209ENST00000573474 TP53I13Q8NBR0 393 aaPredicted RBP13.51□□□□□ -0.25
CCDC40-209ENST00000573474 PLA2G15Q8NCC3 412 aa13.51□□□□□ -0.25
CCDC40-209ENST00000573474 KLK6Q92876 244 aa13.51□□□□□ -0.25
CCDC40-209ENST00000573474 FAM136AQ96C01 138 aa13.51□□□□□ -0.25
CCDC40-209ENST00000573474 SGF29Q96ES7 293 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms