RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 KCTD14Q9BQ13 255 aaPredicted RBP11.12□□□□□ -0.63
RPAIN-212ENST00000573126 HAUS8Q9BT25 410 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 MUC3BQ9H195 1237 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 AIG1Q9NVV5 245 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 CEPT1Q9Y6K0 416 aa11.12□□□□□ -0.63
RPAIN-212ENST00000573126 CCDC154A6NI56 674 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 FAM155AB1AL88 458 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-212ENST00000573126 E2F3O00716 465 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 STX7O15400 261 aaKnown RBP11.11□□□□□ -0.63
RPAIN-212ENST00000573126 HNRNPRO43390 633 aaKnown RBP11.11□□□□□ -0.63
RPAIN-212ENST00000573126 SNAP91O60641 907 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 VPS4BO75351 444 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 SLC22A3O75751 556 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 ASLP04424 464 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 PRR35P0CG20 571 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 UROSP10746 265 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 ZNF23P17027 643 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 FASP25445 335 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 CORO1AP31146 461 aaKnown RBP11.11□□□□□ -0.63
RPAIN-212ENST00000573126 SH3BGRP55822 239 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-212ENST00000573126 LIPEQ05469 1076 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 PLA2G4EQ3MJ16 856 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 XKR7Q5GH72 579 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 OGFOD2Q6N063 350 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 GPRIN3Q6ZVF9 776 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 CAMK1DQ8IU85 385 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 ZNF786Q8N393 782 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 DBF4BQ8NFT6 615 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 CCDC97Q96F63 343 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-212ENST00000573126 MYRFLQ96LU7 910 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 LIN28AQ9H9Z2 209 aaKnown RBP11.11□□□□□ -0.63
RPAIN-212ENST00000573126 RNF186Q9NXI6 227 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-212ENST00000573126 STX16O14662 325 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 COCHO43405 550 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 PRAMEF12O95522 483 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 MLYCDO95822 493 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 C1RP00736 705 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 BMP1P13497 986 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 IL12AP29459 219 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 TTPAP49638 278 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 ILF2Q12905 390 aaKnown RBP11.11□□□□□ -0.63
RPAIN-212ENST00000573126 TRAF2Q12933 501 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 ZNF177Q13360 481 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-212ENST00000573126 BIRC2Q13490 618 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 TGFBIQ15582 683 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 ACBD5Q5T8D3 534 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-212ENST00000573126 BHMTQ93088 406 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 SEPHS2Q99611 448 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 ADI1Q9BV57 179 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 TRIM54Q9BYV2 358 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 PADI4Q9UM07 663 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 PCDHB7Q9Y5E2 793 aa11.11□□□□□ -0.63
RPAIN-212ENST00000573126 EI24O14681 340 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 SYNCRIPO60506 623 aaKnown RBP11.1□□□□□ -0.63
RPAIN-212ENST00000573126 CLDN11O75508 207 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 HTR6P50406 440 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 CCT8P50990 548 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 CLCN2P51788 898 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 POLR2JP52435 117 aaKnown RBP11.1□□□□□ -0.63
RPAIN-212ENST00000573126 ERVPABLB-1P60509 514 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 PLIN5Q00G26 463 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 SREBF2Q12772 1141 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 AAK1Q2M2I8 961 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 C5orf22Q49AR2 442 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 C6orf136Q5SQH8 315 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 RNF219Q5W0B1 726 aaPredicted RBP11.1□□□□□ -0.63
RPAIN-212ENST00000573126 LETMD1Q6P1Q0 360 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 SLC2A7Q6PXP3 512 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 SPATA19Q7Z5L4 167 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 OR56A4Q8NGH8 313 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 BCL7CQ8WUZ0 217 aaPredicted RBP11.1□□□□□ -0.63
RPAIN-212ENST00000573126 CYGBQ8WWM9 190 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 WBP2Q969T9 261 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 CASD1Q96PB1 797 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 CLK4Q9HAZ1 481 aaKnown RBP11.1□□□□□ -0.63
RPAIN-212ENST00000573126 SUN2Q9UH99 717 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 ARIH1Q9Y4X5 557 aaPredicted RBP11.1□□□□□ -0.63
RPAIN-212ENST00000573126 COMMD10Q9Y6G5 202 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 CLGNO14967 610 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 KLK8O60259 260 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 TBC1D4O60343 1298 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 KATNA1O75449 491 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 STC2O76061 302 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 TMCC1O94876 653 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 ERVK-8P63133 956 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 ARF5P84085 180 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 ATP6AP1LQ52LC2 224 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 NANOGP8Q6NSW7 305 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 Q6ZSR9 355 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 TMEM199Q8N511 208 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 TRPV3Q8NET8 790 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 PROKR1Q8TCW9 393 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 CENPNQ96H22 339 aaPredicted RBP11.1□□□□□ -0.63
RPAIN-212ENST00000573126 FBXL20Q96IG2 436 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 PHF12Q96QT6 1004 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 TTPALQ9BTX7 342 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 NUSAP1Q9BXS6 441 aaKnown RBP11.1□□□□□ -0.63
RPAIN-212ENST00000573126 ADGRE3Q9BY15 652 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 SOX17Q9H6I2 414 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms