RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 TNFRSF8P28908 595 aa11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 PDE1BQ01064 536 aa11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 GPR18Q14330 331 aa11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 IHHQ14623 411 aa11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 SEPT7Q16181 437 aaKnown RBP11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 PLA2G4EQ3MJ16 856 aa11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 CRTC3Q6UUV7 619 aa11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 ABRAXAS1Q6UWZ7 409 aa11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 HPS6Q86YV9 775 aa11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 Q8NA96 180 aa11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 SIDT2Q8NBJ9 832 aaKnown RBP11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 LPCAT1Q8NF37 534 aa11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 SYT11Q9BT88 431 aa11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 RAB33BQ9H082 229 aa11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 OR2AG1Q9H205 316 aa11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 AKIRIN1Q9H9L7 192 aaPredicted RBP11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 PCDH9Q9HC56 1237 aa11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 TRIM39Q9HCM9 518 aa11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 SLC40A1Q9NP59 571 aa11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 ARFGAP3Q9NP61 516 aa11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 LUZP4Q9P127 313 aa11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 SEMA5BQ9P283 1151 aa11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 AMACRQ9UHK6 382 aa11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 ERRFI1Q9UJM3 462 aaPredicted RBP11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 DNAJC16Q9Y2G8 782 aa11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 SCINQ9Y6U3 715 aa11.6□□□□□ -0.55
GTF3C1-209ENST00000568569 OR52A4PA6NMU1 304 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 CHUKO15111 745 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 KMOO15229 486 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 CPNE3O75131 537 aaKnown RBP11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 LDLRP01130 860 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 BRAFP15056 766 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 FOLR1P15328 257 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 LPOP22079 712 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 PTGIRP43119 386 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 ZNF165P49910 485 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 ACY1Q03154 408 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 UBXN1Q04323 297 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 LAMB3Q13751 1172 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 ZNF648Q5T619 568 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 SLC6A19Q695T7 634 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 TIGD7Q6NT04 549 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 FAM199XQ6PEV8 388 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 WASH2PQ6VEQ5 465 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 LRRTM4Q86VH4 590 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 RHOT1Q8IXI2 618 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 ANKRD20A12PQ8NF67 263 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 MAML1Q92585 1016 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 PNPLA2Q96AD5 504 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 CXorf40BQ96DE9 158 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 TCTN2Q96GX1 697 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 SLC41A2Q96JW4 573 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 ZNF514Q96K75 400 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 ERGIC2Q96RQ1 377 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 TIMM29Q9BSF4 260 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 ZSCAN5AQ9BUG6 496 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 MLPHQ9BV36 600 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 SPATA16Q9BXB7 569 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 NUP62CLQ9H1M0 184 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 PCDH18Q9HCL0 1135 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 WASH6PQ9NQA3 447 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 FGF21Q9NSA1 209 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 SLC23A2Q9UGH3 650 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 FARSAQ9Y285 508 aaKnown RBP11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 MED13Q9UHV7 2174 aa11.59□□□□□ -0.55
GTF3C1-209ENST00000568569 IGHV5-51A0A0C4DH38 117 aa11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 SSU72P8A0A1W2PR75 194 aa11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 JCHAINP01591 159 aa11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 RARAP10276 462 aa11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 TCF4P15884 667 aa11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 ZNF7P17097 686 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 RPL10P27635 214 aaKnown RBP11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 DCDC1P59894 354 aa11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 KCNAB1Q14722 419 aa11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 QPCTQ16769 361 aa11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 AGAP9Q5VTM2 703 aa11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 PDPK2PQ6A1A2 396 aa11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 KLHL35Q6PF15 583 aa11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 IRF2BP2Q7Z5L9 587 aa11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 ADGRG6Q86SQ4 1221 aa11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 KMT5CQ86Y97 462 aa11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 FDCSPQ8NFU4 85 aa11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 ARRDC2Q8TBH0 407 aa11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 TEKT4Q8WW24 435 aa11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 MR1Q95460 341 aa11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 GLYATL1Q969I3 302 aa11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 ZNF653Q96CK0 615 aa11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 C5orf34Q96MH7 638 aa11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 MFRPQ9BY79 579 aa11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 MRPL47Q9HD33 250 aaKnown RBP11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 RBM22Q9NW64 420 aaKnown RBP eCLIP11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 SLC5A6Q9Y289 635 aa11.58□□□□□ -0.56
GTF3C1-209ENST00000568569 ANKRD66B4E2M5 251 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 MATN3O15232 486 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 VEGFDO43915 354 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 MFSD11O43934 449 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 TMEM63AO94886 807 aa11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 FTLP02792 175 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-209ENST00000568569 EBLN1P0CF75 366 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms