RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 QKIQ96PU8 341 aaKnown RBP eCLIP12.05□□□□□ -0.48
GTF3C1-208ENST00000567843 FICDQ9BVA6 458 aa12.05□□□□□ -0.48
GTF3C1-208ENST00000567843 IL26Q9NPH9 171 aa12.05□□□□□ -0.48
GTF3C1-208ENST00000567843 RAD18Q9NS91 495 aa12.05□□□□□ -0.48
GTF3C1-208ENST00000567843 RSPH14Q9UHP6 348 aa12.05□□□□□ -0.48
GTF3C1-208ENST00000567843 EPN1Q9Y6I3 576 aaPredicted RBP12.05□□□□□ -0.48
GTF3C1-208ENST00000567843 COL6A6A6NMZ7 2263 aa12.05□□□□□ -0.48
GTF3C1-208ENST00000567843 OR52A4PA6NMU1 304 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 KMOO15229 486 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 NDUFA10O95299 355 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 AGTP01019 485 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 VIPP01282 170 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 SLC19A1P41440 591 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 TNNT3P45378 269 aaPredicted RBP12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 GFERP55789 205 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 DCDC1P59894 354 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 UBE2IP63279 158 aaKnown RBP12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 OTUD4Q01804 1114 aaKnown RBP12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 TMEM115Q12893 351 aaPredicted RBP12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 SQSTM1Q13501 440 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 SLC14A2Q15849 920 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 PPP2R5EQ16537 467 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 LINC00303Q3SY05 128 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 C11orf63Q6NUN7 778 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 RAD9BQ6WBX8 426 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 MICALCLQ6ZW33 695 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 BBS12Q6ZW61 710 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 GLT6D1Q7Z4J2 308 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 TRIM48Q8IWZ4 208 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 CCDC170Q8IYT3 715 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 IL22RA1Q8N6P7 574 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 EXD3Q8N9H8 876 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 ACRBPQ8NEB7 543 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 ACTL9Q8TC94 416 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 SH3KBP1Q96B97 665 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 SGF29Q96ES7 293 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 RBM41Q96IZ5 413 aaKnown RBP12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 FCRL5Q96RD9 977 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 APMAPQ9HDC9 416 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 ZNF624Q9P2J8 865 aaPredicted RBP12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 REXO2Q9Y3B8 237 aaKnown RBP12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 PCDHGA4Q9Y5G9 962 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 SLC30A1Q9Y6M5 507 aa12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 ZFC3H1O60293 1989 aaKnown RBP12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 TLN1Q9Y490 2541 aaKnown RBP12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 FLNBO75369 2602 aaKnown RBP12.04□□□□□ -0.48
GTF3C1-208ENST00000567843 SDK2Q58EX2 2172 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 KIR2DS5A0A0G2JLQ3 304 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 A0A0G2JNG1 304 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 STMND1H3BQB6 276 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 KIR2DS3K7RE56 304 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 CHUKO15111 745 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 MTSS1O43312 755 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 SLC2A4P14672 509 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 BRAFP15056 766 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 PBLDP30039 288 aaPredicted RBP12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 HMGCLP35914 325 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 SPAM1P38567 509 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 SEPHS1P49903 392 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 CTSCP53634 463 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 KIR2DS5Q14953 304 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 SLC1A5Q15758 541 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 PDPK2PQ6A1A2 396 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 DET1Q7L5Y6 550 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 ARHGAP22Q7Z5H3 698 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 UNC5BQ8IZJ1 945 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 CCDC112Q8NEF3 446 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 NKD1Q969G9 470 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 TTC25Q96NG3 672 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 TGM7Q96PF1 710 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 DPYSL5Q9BPU6 564 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 GORASP1Q9BQQ3 440 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 ARHGAP9Q9BRR9 750 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 LACRTQ9GZZ8 138 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 OGFRQ9NZT2 677 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 IL17CQ9P0M4 197 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 NFKBIL1Q9UBC1 381 aaPredicted RBP12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 FAM8A1Q9UBU6 413 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 PSMD13Q9UNM6 376 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 WDR37Q9Y2I8 494 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 KCTD3Q9Y597 815 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 PCDHGA3Q9Y5H0 932 aa12.03□□□□□ -0.48
GTF3C1-208ENST00000567843 GLYATL1P3A0A0U1RQE8 302 aa12.02□□□□□ -0.49
GTF3C1-208ENST00000567843 A0A0U1RQJ8 604 aa12.02□□□□□ -0.49
GTF3C1-208ENST00000567843 OR2AG2A6NM03 316 aa12.02□□□□□ -0.49
GTF3C1-208ENST00000567843 OR5K4A6NMS3 321 aa12.02□□□□□ -0.49
GTF3C1-208ENST00000567843 B4E171 279 aa12.02□□□□□ -0.49
GTF3C1-208ENST00000567843 APOC4-APOC2K7ER74 178 aa12.02□□□□□ -0.49
GTF3C1-208ENST00000567843 KIF1CO43896 1103 aaKnown RBP12.02□□□□□ -0.49
GTF3C1-208ENST00000567843 VEGFDO43915 354 aa12.02□□□□□ -0.49
GTF3C1-208ENST00000567843 RAD1O60671 282 aa12.02□□□□□ -0.49
GTF3C1-208ENST00000567843 POP7O75817 140 aaKnown RBP12.02□□□□□ -0.49
GTF3C1-208ENST00000567843 APOC2P02655 101 aa12.02□□□□□ -0.49
GTF3C1-208ENST00000567843 FAM87AP0C7U9 286 aa12.02□□□□□ -0.49
GTF3C1-208ENST00000567843 PLA2G2AP14555 144 aa12.02□□□□□ -0.49
GTF3C1-208ENST00000567843 LIFP15018 202 aa12.02□□□□□ -0.49
GTF3C1-208ENST00000567843 AMD1P17707 334 aa12.02□□□□□ -0.49
GTF3C1-208ENST00000567843 IDSP22304 550 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms